uc001hlf.1_intron_8_0_chr1_217793842

GGGGCCGCCGGGCGCCAACCGATCGGAGCTCCAGCAGCCGGGAACAGCTGGTGAGGCTGGCGGCCCTGGGGAGGGGGAGGTCAGGGAAGGGTGTGATTGCCCGAGGCCGCTCCGCTGGACCTGGAATGGAGGCGGGAGGGAGCTGTGATGGATGATCTGAAGACATCTAGGCCTTGCTCTCACTCATTCCTGGGATGCACGCAGTTTGAGGGAGCTCTTGGGTGTGTGCCAAAGATTTGTGAAAGAATAC
.........................................................................................................................................((((((.((..((((((.((....)))))))).))...)))))).((((....))))........................................................
.......................................................................................................................................136.............................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR037940(GSM510478)
293cand5_rep2. (cell line)

SRR037939(GSM510477)
293cand5_rep1. (cell line)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR343335

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR189782

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR343334

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR037935(GSM510473)
293cand3. (cell line)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189787

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)

SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

TAX577741(Rovira)
total RNA. (breast)

SRR037932(GSM510470)
293cand4_rep1. (cell line)

DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

TAX577579(Rovira)
total RNA. (breast)

TAX577744(Rovira)
total RNA. (breast)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

SRR038852(GSM458535)
QF1160MB. (cell line)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

............................................................................................................................................AGCTGTGATGGATGATCTGAAG........................................................................................

24.00

9.00

3.00

1.00

..................................................................................................................................................GATGGATGATCTGAAGA.......................................................................................

7.50

.....................................................................................................................................................................................ACTCATTCCTGGGATCAAG..................................................

4.00

0.00

3.00

1.00

......................................................................................................................................................GATGATCTGAAGACAACC..................................................................................

3.00

0.00

3.00

...................................................................................................................TGGACCTGGAATGGAGGC.....................................................................................................................

2.00

1.00

...............................................................................................ATTGCCCGAGGCCGCTCCGCTGGACCCGG..............................................................................................................................

2.00

0.00

2.00

........................................................................................................................................AGGGAGCTGTGATGGATG................................................................................................

2.00

.............................................................................................................................ATGGAGGCGGGAGGGAGCTGTGATGGATGACC.............................................................................................

1.00

0.00

1.00

.....................ATCGGAGCTCCAGCAGCCGGGAACAGC..........................................................................................................................................................................................................

1.00

..................................................................................................................................GGCGGGAGGGAGCTGTGATGGATGAT..............................................................................................

1.00

.................ACCGATCGGAGCTCCAGC.......................................................................................................................................................................................................................

1.00

......................................................................................................................................GGAGGGAGCTGTGATAACA.................................................................................................

1.00

0.00

1.00

.......................................................................AGGGGGAGGTCAGGGAAGGGTG.............................................................................................................................................................

1.00

.................................................................................................TGCCCGAGGCCGCTCCGCTGAACC.................................................................................................................................

1.00

0.00

1.00

.................ACCGATCGGAGCTCCAGCAGCCGGG................................................................................................................................................................................................................

1.00

.........................................................................................................................TGGAATGGAGGCGGGAGG...............................................................................................................

1.00

...........................................................................................................................................................................................TCCTGGGATGCACGCGCGT............................................

1.00

0.00

1.00

............................................................................................................................................AGCTGTGATGGATGATCTGAAGAC......................................................................................

1.00

............................................................................................................................................................CTGAAGACATCTAGGCCTTGCTCT......................................................................

1.00

........................GGAGCTCCAGCAGCCGCT................................................................................................................................................................................................................

1.00

0.00

1.00

.......................................................................AGGGGGAGGTCAGGGAGCAT...............................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................TGAGGGAGCTCTTGGGTGTGCGCC....................

1.00

0.00

1.00

..........................................................................GGGAGGTCAGGGAAGTCC..............................................................................................................................................................

1.00

0.00

1.00

................................AGCAGCCGGGAACAGCTATT......................................................................................................................................................................................................

1.00

0.00

1.00

..........................................................................................GTGTGATTGCCCGAGGC...............................................................................................................................................

1.00

...............................................................................................................................GGAGGCGGGAGGGAGCATAG.......................................................................................................

1.00

0.00

1.00

............................................................................................................................................AGCTGTGATGGATGATCTGAAGA.......................................................................................

1.00

..........................................................................................................................GGAATGGAGGCGGGAGGGAG............................................................................................................

1.00

...........................................................................................................................................................................................................GTTTGAGGGAGCTCTTGGGT...........................

1.00

..........................................................................................................................GGAATGGAGGCGGGACTC..............................................................................................................

1.00

0.00

1.00

...............................................................................................................................GGAGGCGGGAGGGAGCTGTGAAA....................................................................................................

1.00

0.00

1.00

...................................................................................................CCCGAGGCCGCTCCGCTGGACCCGG..............................................................................................................................

1.00

0.00

1.00

.............................................................................................................................................GCTGTGATGGATGATCTGAAG........................................................................................

1.00

......................................CGGGAACAGCTGGTGAA...................................................................................................................................................................................................

1.00

0.00

1.00

.................................................................................................TGCCCGAGGCCGCTCCGCTGGACC.................................................................................................................................

1.00

......................................................................................................................ACCTGGAATGGAGGCGGGAGG...............................................................................................................

1.00

....................GATCGGAGCTCCAGCAGCCGGGAACAGCT.........................................................................................................................................................................................................

1.00

...GCCGCCGGGCGCCAACCGATCG.................................................................................................................................................................................................................................

1.00

.......................CGGAGCTCCAGCAGC....................................................................................................................................................................................................................

0.20