uc001hfv.2_intron_1_0_chr1_207640258

TCAAGCAAATAATATGTGGGGGCCGACACGACTACCAACCTGTGTAAGTGGTGAGTATGAAAAGAAAGCTGGGTTGGGAGGTTGGGGTCTTGCCTTTCTGTGCAGACCACGTTTTGTACCCTCCTGAAGGACAAACAGTGTGAACATGTAATGATGAGGGTGGAAGAAGGAAACAAGGGAAAAGGTGAAAGTTATGGCTTCTTCGTGGAGGCATATAACTGCTCGTTCAAAAAACATCAATTGAGCAAAG
...................................................................((((.(((((((((..((((.....))))...(((((((......)))))))))))))....)))...))))...............................................................................................................
...........................................................60..........................................................................................152................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR040037(GSM532922)
G243T. (cervix)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR040036(GSM532921)
G243N. (cervix)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR189787

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040034(GSM532919)
G001N. (cervix)

SRR040039(GSM532924)
G531T. (cervix)

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189782

SRR038852(GSM458535)
QF1160MB. (cell line)

SRR189784

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040028(GSM532913)
G026N. (cervix)

SRR040011(GSM532896)
G529T. (cervix)

TAX577740(Rovira)
total RNA. (breast)

SRR038857(GSM458540)
D20. (cell line)

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577745(Rovira)
total RNA. (breast)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR029124(GSM416753)
HeLa. (hela)

TAX577580(Rovira)
total RNA. (breast)

SRR191463(GSM715573)
111genomic small RNA (size selected RNA from . (breast)

SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

GSM532874(GSM532874)
G699T. (cervix)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR189785

SRR040007(GSM532892)
G601T. (cervix)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR040035(GSM532920)
G001T. (cervix)

GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040029(GSM532914)
G026T. (cervix)

SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR038858(GSM458541)
MEL202. (cell line)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

SRR040020(GSM532905)
G699N_2. (cervix)

GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577453(Rovira)
total RNA. (breast)

SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)

SRR040030(GSM532915)
G013N. (cervix)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

TAX577746(Rovira)
total RNA. (breast)

GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR037932(GSM510470)
293cand4_rep1. (cell line)

TAX577590(Rovira)
total RNA. (breast)

SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)

TAX577744(Rovira)
total RNA. (breast)

SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)

TAX577743(Rovira)
total RNA. (breast)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)

SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)

SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)

SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

GSM532875(GSM532875)
G547N. (cervix)

SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)

SRR040016(GSM532901)
G645N. (cervix)

SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)

SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)

SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)

SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)

GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)

SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)

SRR038855(GSM458538)
D10. (cell line)

SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

TAX577739(Rovira)
total RNA. (breast)

SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)

SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)

SRR040014(GSM532899)
G623N. (cervix)

SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)

SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)

SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)

SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)

SRR390723(GSM850202)
total small RNA. (cell line)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)

TAX577579(Rovira)
total RNA. (breast)

SRR038860(GSM458543)
MM426. (cell line)

GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)

TAX577589(Rovira)
total RNA. (breast)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)

SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)

SRR038862(GSM458545)
MM472. (cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)

SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)

TAX577588(Rovira)
total RNA. (breast)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

................................................................AAAGCTGGGTTGGGAGGGCGA.....................................................................................................................................................................

22.00

0.25

1.50

0.50

1.75

0.50

0.25

0.50

0.25

0.50

0.25

0.50

0.75

0.25

0.50

0.25

0.50

0.25

.................................................................AAGCTGGGTTGGGAGGGCGA.....................................................................................................................................................................

15.00

0.00

3.00

1.00

2.00

1.00

...............................................................GAAAGCTGGGTTGGGAGGGCGA.....................................................................................................................................................................

12.00

0.50

3.50

0.50

2.00

0.50

.........................................................................TTGGGAGGTTGGGGTAGAA..............................................................................................................................................................

5.00

0.00

5.00

................................................................AAAGCTGGGTTGGGAGGGCG......................................................................................................................................................................

4.50

0.25

0.50

0.25

...............................................................GAAAGCTGGGTTGGGAGGGCG......................................................................................................................................................................

3.50

0.50

1.00

0.50

1.00

.................................................................AAGCTGGGTTGGGAGGGCG......................................................................................................................................................................

3.00

0.00

1.00

................................................................AAAGCTGGGTTGGGAGGGCGT.....................................................................................................................................................................

2.75

0.25

...............................................................GAAAGCTGGGTTGGGAGGG........................................................................................................................................................................

2.50

0.50

1.00

0.50

............TATGTGGGGGCCGACACGACT.........................................................................................................................................................................................................................

2.00

...........................ACGACTACCAACCTGTGTA............................................................................................................................................................................................................

2.00

.................................................................AAGCTGGGTTGGGAGGGCGG.....................................................................................................................................................................

2.00

0.00

1.00

................................................................AAAGCTGGGTTGGGAGGTCGA.....................................................................................................................................................................

2.00

0.00

2.00

................................................................AAAGCTGGGTTGGGAGGGCGG.....................................................................................................................................................................

1.25

0.25

................................................................AAAGCTGGGTTGGGAGGGGGA.....................................................................................................................................................................

1.25

0.25

.................................................................AAGCTGGGTTGGGAGGACGA.....................................................................................................................................................................

1.00

0.00

1.00

.................................................................AAGCTGGGTTGGGAGGGCGT.....................................................................................................................................................................

1.00

0.00

1.00

.....................................................................TGGGTTGGGAGGTTGGGTAC.................................................................................................................................................................

1.00

0.00

1.00

...............................................................GAAAGCTGGGTTGGGAGGGAGA.....................................................................................................................................................................

1.00

0.50

.................................................................AAGCTGGGTTGGGAGGACAA.....................................................................................................................................................................

1.00

0.00

1.00

.................................................................................................................................GACAAACAGTGTGAAAGAC......................................................................................................

1.00

0.00

1.00

..............................................................AGAAAGCTGGGTTGGGAGGGTGA.....................................................................................................................................................................

1.00

0.00

1.00

...............................................................GAAAGCTGGGTTGGGGGGG........................................................................................................................................................................

1.00

0.00

1.00

................................................................AAAGCTGGGTTGGGAGGTCGAA....................................................................................................................................................................

1.00

0.00

1.00

...............................................................GAAAGCTGGGTTGGGAGGGCGT.....................................................................................................................................................................

1.00

0.50

...............................................................GAAAGCTGGGTTGGGATGG........................................................................................................................................................................

1.00

0.00

1.00

................................................................AAAGCTGGGTTGGGAGGTCGTT....................................................................................................................................................................

1.00

0.00

1.00

................................................................AAAGCTGGGTTGGGAGGTCG......................................................................................................................................................................

1.00

0.00

1.00

.................................................................AAGCTGGGTTGGGAGGGGG......................................................................................................................................................................

1.00

0.00

1.00

.................................................................AAGCTGGGTTGGGAGATG.......................................................................................................................................................................

1.00

0.00

1.00

...............................................................GAAAGCTGGGTTGGGAGGGCAA.....................................................................................................................................................................

1.00

0.50

...............................................................GAAAGCTGGGTTGGGAGGGGGA.....................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGGGCT......................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGGCAGT.....................................................................................................................................................................

0.50

................................................................AAAGCTGGGTTGGGAGGGCAA.....................................................................................................................................................................

0.50

0.25

...............................................................GAAAGCTGGGTTGGGAGGGA.......................................................................................................................................................................

0.50

................................................................AAAGCTGGGTTGGGAGGGTGA.....................................................................................................................................................................

0.50

0.25

................................................................AAAGCTGGGTTGGGAGGAAAA.....................................................................................................................................................................

0.50

0.25

...............................................................GAAAGCTGGGTTGGGAGGGCTC.....................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGGGC.......................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGGCCG......................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGG.........................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGGCCGA.....................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGGGT.......................................................................................................................................................................

0.50

................................................................AAAGCTGGGTTGGGAGGGCT......................................................................................................................................................................

0.50

0.25

...............................................................GAAAGCTGGGTTGGGAGGGTGA.....................................................................................................................................................................

0.50

...............................................................GAAAGCTGGGTTGGGAGGGCGC.....................................................................................................................................................................

0.50

................................................................AAAGCTGGGTTGGGAG..........................................................................................................................................................................

0.40

0.20

................................................................AAAGCTGGGTTGGGAGGGCGC.....................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGGGGA......................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGGGGGC.....................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGGGGGT.....................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGGAGG......................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGGGT.......................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGG.........................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGGGCCA.....................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGGGCTA.....................................................................................................................................................................

0.25

................................................................AAAGCTGGGTTGGGAGATTT......................................................................................................................................................................

0.20

0.40

0.20

................................................................AAAGCTGGGTTGGGAGTAAT......................................................................................................................................................................

0.20

0.40

0.20

................................................................AAAGCTGGGTTGGGAGAAAT......................................................................................................................................................................

0.20

0.40

0.20

................................................................AAAGCTGGGTTGGGAGTGCG......................................................................................................................................................................

0.20

0.40

0.20

................................................................AAAGCTGGGTTGGGAGAAGA......................................................................................................................................................................

0.20

0.40

0.20

................................................................AAAGCTGGGTTGGGAGCGCG......................................................................................................................................................................

0.20

0.40

0.20