ID: uc001hen.1_intron_2_0_chr1_206944405_r
GENE: IL10(2)
chr1:206944355-206944750-


(1)
AGO2.ip
(4)
BRAIN
(14)
BREAST
(2)
CELL-LINE
(3)
CERVIX
(2)
HEART
(4)
LIVER
(1)
OTHER
(20)
SKIN

Sense strand
ATCAGCTGGACAACTTGTTGTTAAAGGAGTCCTTGCTGGAGGACTTTAAGGTGAGAGCAGGGGCGGGGTGCTGGGGGAGTGTGCAGCATGATTAAGGGAAGGGAGACTCTGCTTCCTGATTGCAGGGAATTGGGTTTGTTTCCTTCGCTTTGAAAAGGAGAAGTGGGAAGATGTTAACTCAGCACATCCAGCAGCCAGAGGGTTTACAAAGGGCTCAGTCCCTTCGGGGAGGCTTCTGGTGAAGGAGGATCGCTAGAACCAAGCTGTCCTCTTAAGCTAGTTGCAGCAGCCCCTCCTCCCAGCCACCTCCGCCAATCTCTCACTCACCTTTGGCTCCTGCCCTTAGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGA
...................................................................................................................................................................................................................................((..(((.(((((..((((((((.(((.......))).))))))))..)))))....)))..)).........................................................................................................
...................................................................................................................................................................................................................................228............................................................291.......................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040016(GSM532901)
G645N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
........................................................................................................................................................................................................................................................................TGTCCTCTTAAGCTAGTTGCAGC.............................................................................................................2317.007.00--1.002.00---------1.00-1.00-1.00-----------------------1.00------------
........................................................................................................................................................................................................................................CTTCTGGTGAAGGAGGAT..................................................................................................................................................1814.004.00-3.00-------------------------1.00--------------------------
........................................................................................................................................................................................................................................................................TGTCCTCTTAAGCTAGTTGCA...............................................................................................................2114.004.00-------------------------------1.001.001.00--1.00-----------------
........................................................................................................................................................................................................................................................................TGTCCTCTTAAGCTAGTTGCAT..............................................................................................................2212.004.00-----------------------1.00-----------1.00------------------
.............................................................................................................................................................................................................................................GGTGAAGGAGGATCGCTAGAA..........................................................................................................................................2112.002.00----2.00-------------------------------------------------
.......................................................................................................................................................................................................................................................................CTGTCCTCTTAAGCTAGTTGCAG..............................................................................................................2312.002.00------2.00-----------------------------------------------
.............................................................................................................................................................................................................................................GGTGAAGGAGGATCGCTAGAAC.........................................................................................................................................2212.002.00----------------------1.00-------------------1.00-----------
.........................................................CAGGGGCGGGGTGCTGGGGGAGTGTGCA.......................................................................................................................................................................................................................................................................................................................2812.002.00-----2.00------------------------------------------------
..............................................................................................................................................................................................................................................GTGAAGGAGGATCGCTAGAA..........................................................................................................................................2012.002.00---------2.00--------------------------------------------
........................................................................................................................................................................................................................................................ATCGCTAGAACCAAGC....................................................................................................................................1612.002.00----------1.00---------------1.00---------------------------
..............................................................GCGGGGTGCTGGGGGGATT...........................................................................................................................................................................................................................................................................................................................191.000.00--------------------1.00---------------------------------
........................................................................................................................................................................................................................................................ATCGCTAGAACCAAGCTG..................................................................................................................................1811.001.00----------------------------------1.00-------------------
........................................................................................................................................................................................................................................................................TGTCCTCTTAAGCTAGTTGCAG..............................................................................................................2211.001.00---------------------------------------------1.00--------
.......................................................................................................................................................................................................................................GCTTCTGGTGAAGGAGGAT..................................................................................................................................................1911.001.00----------------1.00-------------------------------------
......................................................................................................................................................TGAAAAGGAGAAGTGGGCG...................................................................................................................................................................................................................................191.000.00-----------------------------1.00------------------------
.....................................................AGAGCAGGGGCGGGGCGC.....................................................................................................................................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------
....................................................GAGAGCAGGGGCGGGGCG......................................................................................................................................................................................................................................................................................................................................181.000.00--------1.00---------------------------------------------
.....................................................AGAGCAGGGGCGGGGCTGC....................................................................................................................................................................................................................................................................................................................................191.000.001.00-----------------------------------------------------
.......................................................................................................................................................................................................................................GCTTCTGGTGAAGGAGGATCG................................................................................................................................................2111.001.00--------------1.00---------------------------------------
.................................................................................TGCAGCATGATTAAGGGAAGGGAGGC.................................................................................................................................................................................................................................................................................................261.000.00------------------------1.00-----------------------------
.......................................................................................................................................................GAAAAGGAGAAGTGGGCTA..................................................................................................................................................................................................................................191.000.00-------------------------------------------1.00----------
.................................................................................................................................TTGGGTTTGTTTCCTCTGT........................................................................................................................................................................................................................................................191.000.00-------1.00----------------------------------------------
.............................................................................................................................................................................................................................................GGTGAAGGAGGATCGCTAGA...........................................................................................................................................2011.001.00------------------------------1.00-----------------------
.....................................................AGAGCAGGGGCGGGGCGGC....................................................................................................................................................................................................................................................................................................................................191.000.001.00-----------------------------------------------------
.........................................................................................................................................................................................................................................................................GTCCTCTTAAGCTAGTTGCAGT.............................................................................................................221.000.00--------------------------------------------1.00---------
...................................................................................................AGGGAGACTCTGCTTAAG.......................................................................................................................................................................................................................................................................................181.000.00-----------1.00------------------------------------------
...........................................................................................................................AGGGAATTGGGTTTGAATA..............................................................................................................................................................................................................................................................191.000.00----------------------------------------------1.00-------
....................................................................................................................................................................................................................................................GAGGATCGCTAGAACCAA......................................................................................................................................1811.001.00--------1.00---------------------------------------------
..................................................GTGAGAGCAGGGGCGTTTT.......................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------1.00------
......................................................................................................................................................................................................................................................GGATCGCTAGAACCAAGCTGTC................................................................................................................................2211.001.00--1.00---------------------------------------------------
...................................................................................................AGGGAGACTCTGCTTCTAC......................................................................................................................................................................................................................................................................................191.000.00------------------1.00-----------------------------------
................................................................................................................................................................................................................................................GAAGGAGGATCGCTAGAAC.........................................................................................................................................1911.001.00----------------------------------------1.00-------------
............................................TTTAAGGTGAGAGCAGGG..............................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------1.00----------------------------
.....................................................................................................................................................................................................................................AGGCTTCTGGTGAAGGAG.....................................................................................................................................................1811.001.00---------------------------------------1.00--------------
............................GTCCTTGCTGGAGGATTGC.............................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------------1.00-------------------------
.........................................................................................................................................................AAAGGAGAAGTGGGACAG.................................................................................................................................................................................................................................181.000.00-------------------1.00----------------------------------
.........................................................................................................................................................................................................................................TTCTGGTGAAGGAGGAT..................................................................................................................................................1720.500.50------------------------------------------------0.50-----
............................................................................................................................................................................................................................................................................................................................CTCTCACTCACCTTTG................................................................1660.170.17-----------------------------------------------------0.17

Antisense strand
ATCAGCTGGACAACTTGTTGTTAAAGGAGTCCTTGCTGGAGGACTTTAAGGTGAGAGCAGGGGCGGGGTGCTGGGGGAGTGTGCAGCATGATTAAGGGAAGGGAGACTCTGCTTCCTGATTGCAGGGAATTGGGTTTGTTTCCTTCGCTTTGAAAAGGAGAAGTGGGAAGATGTTAACTCAGCACATCCAGCAGCCAGAGGGTTTACAAAGGGCTCAGTCCCTTCGGGGAGGCTTCTGGTGAAGGAGGATCGCTAGAACCAAGCTGTCCTCTTAAGCTAGTTGCAGCAGCCCCTCCTCCCAGCCACCTCCGCCAATCTCTCACTCACCTTTGGCTCCTGCCCTTAGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGA
...................................................................................................................................................................................................................................((..(((.(((((..((((((((.(((.......))).))))))))..)))))....)))..)).........................................................................................................
...................................................................................................................................................................................................................................228............................................................291.......................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040016(GSM532901)
G645N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.........................................................................................................................................................................................ATCCAGCAGCCAGAGTGGC................................................................................................................................................................................................ 191.000.00--------------------------------------1.00---------------
.........................................................................................................ACTCTGCTTCCTGATGTG................................................................................................................................................................................................................................................................................. 181.000.00-------1.00----------------------------------------------
..................................................................................................................................................................................................................................................................................................CCCTCCTCCCAGCCACCGG....................................................................................... 191.000.00------------1.00-----------------------------------------
.................................................................................................................................................................................................................................................................................................CCCCTCCTCCCAGCCACAGCA...................................................................................... 211.000.00-------------------------------------1.00----------------
.........................................................................................................................................................................................................................................................................................................CCCAGCCACCTCCGCCATCC............................................................................... 201.000.00---------------------1.00--------------------------------
...............................................................CTCCCCCAGCACCCCG............................................................................................................................................................................................................................................................................................................................. 1630.330.33-------------------------------------------------0.33----
.........TTAACAACAAGTTGT.................................................................................................................................................................................................................................................................................................................................................................................... 1550.200.20---------------------------------------------------0.20--
......................................................................TGCACACTCCCCCAG....................................................................................................................................................................................................................................................................................................................... 1550.200.20--------------------------------------------------0.20---
......................................................................................................................................................................................................................................................................GCTTAAGAGGACAGC....................................................................................................................... 1560.170.17----------------------------------------------------0.17-