ID: uc001heh.2_intron_1_0_chr1_206767143_r.5p
GENE: EIF2D(13)
chr1:206768867-206769116-


(13)
BRAIN
(26)
BREAST
(27)
CELL-LINE
(8)
CERVIX
(1)
FIBROBLAST
(9)
HEART
(2)
HELA
(1)
KIDNEY
(11)
LIVER
(2)
OTHER
(1)
RRP40.ip
(64)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GAATCTGTCCAATTGACATCACCCTAGCACAAAGAGCGTCTAATAAAAAGGTAATTTTAGAAAGACACAATGTTCAAGGATAGTGATTTAATGTTCTTGCCAAGTTCTGGTCTCCCTAATGTGATTGGAGGTTTTTAGATTGGCCTCAAACTCATCAAAGATTTTTTTATGAAACACCCGTGTTTATGTGCCTGGGCTGGGCTCTGTATGAAACAGGTAAAGCTGACCCCGCTCACTCACTGCCCTCTAG
...................................................................................................((.(((((.(((....((...((((...((((((........))))))....))))...))...........(((((....)))))....))).)))))))..................................................
...............................................................................................96......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343337SRR553574(SRX182780)
source: Heart. (Heart)
SRR040015(GSM532900)
G623T. (cervix)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR191514(GSM715624)
165genomic small RNA (size selected RNA from . (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
....................................................................................................CAAGTTCTGGTCTCCGGA....................................................................................................................................18517.000.0029.0096.0032.0016.0026.0018.0010.009.006.002.0021.004.008.009.006.008.002.009.007.004.006.002.00-1.005.003.004.004.004.006.004.007.004.00-2.009.006.004.003.00-4.008.005.003.002.002.001.005.002.002.002.002.001.004.002.002.001.004.003.001.005.002.00--2.002.003.001.003.003.003.001.00--2.002.001.004.00----1.001.00--2.001.001.00-1.00---1.001.00--1.00------1.001.001.00-----1.00--1.00-1.00----1.00-1.001.001.00-1.00-1.00-1.00-1.00--1.00--1.00------1.00--------1.001.00-----1.00-1.00--
....................................................................................................CAAGTTCTGGTCTCCGG.....................................................................................................................................17385.000.00-22.0040.0012.004.008.0014.0015.009.0012.00-14.0010.0011.005.005.00-6.006.0011.002.008.00-2.004.001.004.004.004.004.005.001.005.00-4.00-3.005.005.00-4.001.00-3.00-6.005.002.006.006.00-2.005.001.003.001.003.001.001.001.00-4.004.005.003.001.00-----3.004.004.001.001.003.00--3.00---1.002.00-1.001.00---3.001.001.00-1.001.002.00--2.002.00-2.00-1.00-1.001.00-2.00-------------1.00-------1.00-------1.00-1.00--1.00---------1.00-----1.001.00------
....................................................................................................CAAGTTCTGGTCTCCAAT....................................................................................................................................18185.000.0099.005.00--3.00------1.00--4.00------1.009.001.00-2.00--1.00----8.00-1.001.00--7.00----6.00--1.00--6.001.00---1.00---1.00-----1.001.00-------------2.001.00-1.00-3.00----1.00-----1.00--2.00----2.00-1.00----1.00-------1.00----------1.00-----1.00----------1.00--1.00---1.00-1.00---1.00-------1.00
....................................................................................................CAAGTTCTGGTCTCCAATG...................................................................................................................................1967.000.006.002.002.004.00-2.00--3.004.00-1.00--2.00--1.001.00--1.00--2.003.001.00-----1.00---------3.00---2.00---------2.00-2.002.00---1.00--1.001.00-1.00-----1.00------1.00-----1.003.00---1.00-----------------1.001.00----1.00----1.00-----1.00-----1.00-----------1.00------1.00-----1.00---------
....................................................................................................CAAGTTCTGGTCTCCG......................................................................................................................................1656.000.00-8.002.001.002.001.001.00-2.004.00-1.001.00-1.002.00--1.00-4.002.00---2.001.002.00--1.002.00--------1.00----------1.001.002.001.00--1.00-1.00--2.00--1.00---1.00----1.00---------1.00--1.00---------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGGAT...................................................................................................................................1927.000.00------1.00-1.00-------------1.007.00-------------------------------3.00-----------3.00----------2.00-------------1.00-1.00---1.00---------1.00-----------1.00----------------------1.00-------------------1.00-1.00-1.00-
...................................................................................................CCAAGTTCTGGTCTCCGGA....................................................................................................................................1914.000.00----------------13.00------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
....................................................................................................CAAGTTCTGGTCTCCGCA....................................................................................................................................187.000.00--------------------1.00---------------------------------------1.00-------1.00---------2.00-----------------------------------1.00-----------------------------1.00------------------------
....................................................................................................CAAGTTCTGGTCTCCGT.....................................................................................................................................176.000.00-1.00-----------------------------------------2.00------------------------------------1.00----------------------------------------1.00-----------------------------1.00-----------------
....................................................................................................CAAGTTCTGGTCTCCAATT...................................................................................................................................195.000.00----------------------3.00----------2.00---------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGTA....................................................................................................................................185.000.001.00--1.00-----------------------------------2.00-----------------------------------------1.00---------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGAA....................................................................................................................................184.000.00------------------------------------------------------------------------------------------------------2.00------2.00-----------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCAATA...................................................................................................................................193.000.003.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGC.....................................................................................................................................173.000.00--------------------1.00---------------------------------1.00---------------------------------1.00--------------------------------------------------------------------------------
...............ACATCACCCTAGCACAAAGA.......................................................................................................................................................................................................................2013.003.00----------------------------------3.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGA.....................................................................................................................................172.000.00-----1.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGGT....................................................................................................................................182.000.00-1.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCCATGG..................................................................................................................................2011.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................AATGTGATTGGAGGTTTTGAGT...............................................................................................................221.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCCATG...................................................................................................................................1911.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAAGCTGACCCCGCTCACTCACTGCCCC....281.000.00-----------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
...................................................................................................CCAAGTTCTGGTCTCCGCA....................................................................................................................................191.000.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................AAGTTCTGGTCTCCCATG...................................................................................................................................181.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCAGT....................................................................................................................................181.000.00---------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.......................CTAGCACAAAGAGCGTCTAATAAAAAGGCC.....................................................................................................................................................................................................301.000.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................AATGTGATTGGAGGTTTTGT.................................................................................................................201.000.00------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................GTTTATGTGCCTGGGATCA..................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
....................ACCCTAGCACAAAGAGC.....................................................................................................................................................................................................................1711.001.00---------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
...................................................................................................CCAAGTTCTGGTCTCGGGA....................................................................................................................................191.000.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGGCA...................................................................................................................................191.000.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCCGA....................................................................................................................................1811.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................CTAGCACAAAGAGCGTCT.................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCAAAA...................................................................................................................................191.000.00------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGCG....................................................................................................................................181.000.00--------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
..................TCACCCTAGCACAAAGAGC.....................................................................................................................................................................................................................1911.001.00--------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................AGACACAATGTTCAAGGATAGTG.....................................................................................................................................................................2311.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..............GACATCACCCTAGCACAAAGAG......................................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
....................................................................................................CAAGTTCTGGTCTCCC......................................................................................................................................1611.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................CAAGTTCTGGTCTCCGGC....................................................................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................AGCGTCTAATAAAAAG........................................................................................................................................................................................................1640.250.25-------------------------------------------0.25-----------------------------------------------------------------------------------------------------------------------------

Antisense strand
GAATCTGTCCAATTGACATCACCCTAGCACAAAGAGCGTCTAATAAAAAGGTAATTTTAGAAAGACACAATGTTCAAGGATAGTGATTTAATGTTCTTGCCAAGTTCTGGTCTCCCTAATGTGATTGGAGGTTTTTAGATTGGCCTCAAACTCATCAAAGATTTTTTTATGAAACACCCGTGTTTATGTGCCTGGGCTGGGCTCTGTATGAAACAGGTAAAGCTGACCCCGCTCACTCACTGCCCTCTAG
...................................................................................................((.(((((.(((....((...((((...((((((........))))))....))))...))...........(((((....)))))....))).)))))))..................................................
...............................................................................................96......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343337SRR553574(SRX182780)
source: Heart. (Heart)
SRR040015(GSM532900)
G623T. (cervix)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR191514(GSM715624)
165genomic small RNA (size selected RNA from . (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
.........................................................................................AATGTTCTTGCCAAGTCTG.............................................................................................................................................. 191.000.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
.............................................................................................................................................................................................ACAGAGCCCAGCCCAGGC........................................... 1820.500.50----------------------------------------------------------------------0.50--------------------------------------------------------------------------------------------------