ID: uc001hce.2_intron_5_0_chr1_205280954_r.5p
GENE: (1)
chr1:205290326-205290575-


(2)
AGO2.ip
(16)
B-CELL
(2)
BRAIN
(17)
BREAST
(25)
CELL-LINE
(13)
CERVIX
(5)
HEART
(1)
HELA
(8)
LIVER
(3)
OTHER
(40)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
AAGGCACCTACGGGAAGGTGAAGAAGGCGCGGGAGAGCTCGGGGCGCCTGGTGAGTGCGGCTCCCTCTCGCGGCGCGGGGCGGGCTCCGGCTTGGCCGCCGGCAGGGAGCGGAGGAGGGCGGGCGGCGGCTCGCTCGTTGCTCGGCGGAGAGGCCAGCGTGGTCTTTACCGCGCTGAGCTTGCGGGGCTACTGCGGGGTGTCCCTGGCAGATGTGTCAGTCCGTGATTGCAGGGACAGTGGTCGCAAACT
.......................................................................(((.(((((....))))))))..((((((.((...............)).))))))...........................................................................................................................
.......................................................................72.....................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM532880(GSM532880)
G659T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR040007(GSM532892)
G601T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................GGGGCGGGCTCCGGCGGGT...........................................................................................................................................................19221.000.0038.0038.0029.006.00-3.00-3.003.004.001.001.002.00-3.003.002.003.001.002.001.001.003.002.001.001.00-2.001.002.001.002.001.002.002.001.001.002.001.001.002.002.001.002.00-1.001.001.002.002.001.001.00-1.001.00-1.001.001.001.00--1.001.00-1.001.001.00---1.001.001.00-1.00-1.00-1.00-1.00-1.00--1.00--1.00---1.001.00-1.001.00-1.001.001.001.00-1.001.00------1.00-1.00--1.001.00---------------
............................................................................GGGGCGGGCTCCGGCGGGG...........................................................................................................................................................1921.000.00--4.004.00-2.00-----1.00----1.00----1.00--------1.00-1.00--1.00-----------1.00------------------------------1.00-----1.00---------------------1.00---1.00-----------------------
............................................................................GGGGCGGGCTCCGGCGGA............................................................................................................................................................189.000.001.001.00-----------1.00------2.00---------------------1.00-1.00-------------------------------1.00---------------------------------------1.00-----------------
............................................................................GGGGCGGGCTCCGGCATC............................................................................................................................................................187.000.00----7.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................CGCGGGGCGGGCTCCACA...............................................................................................................................................................184.000.00------3.00-----------------------------------------------------------------------------------------------------------------1.00-------------
............................................................................GGGGCGGGCTCCGGCGATC...........................................................................................................................................................193.000.00----3.00---------------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGTG............................................................................................................................................................183.000.00-----1.00-----1.00-------------------------------------------------------------------------------------------------------------1.00------------
............................................................................GGGGCGGGCTCCGGCGGGC...........................................................................................................................................................193.000.00--1.00---------1.00-----------1.00-------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGCG............................................................................................................................................................183.000.00---1.00------------------------------------------1.00-----------------------------------1.00---------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGA.............................................................................................................................................................172.000.00--------1.00---------------------------------------------------------------------------------------------------1.00-------------------------
............................................................................GGGGCGGGCTCCGGCGGAA...........................................................................................................................................................192.000.00-------------2.00------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGGTT...........................................................................................................................................................192.000.00--------------------------------------------------------------------1.00-------------------1.00---------------------------------------------
............................................................................GGGGCGGGCTCCGGCGAG............................................................................................................................................................182.000.00--------------------------------------1.00------1.00----------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGGC............................................................................................................................................................182.000.00---1.00---------------------------------------------------------------------------------------1.00------------------------------------------
.........................................................................CGCGGGGCGGGCTCCGAA...............................................................................................................................................................181.000.00------1.00-------------------------------------------------------------------------------------------------------------------------------
...........GGGAAGGTGAAGAAGGGG.............................................................................................................................................................................................................................181.000.00---------------------------------------------------------------------------------------1.00----------------------------------------------
.................GTGAAGAAGGCGCGGGAGAGCTC..................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................CGTTGCTCGGCGGAG....................................................................................................1511.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGGCG...........................................................................................................................................................191.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TGATTGCAGGGACAGTGGTCG......2111.001.00--------------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................CTCCGGCTTGGCCGCCGGCAGGG...............................................................................................................................................2311.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGAAA...........................................................................................................................................................191.000.00------------------------------------1.00-------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGCA............................................................................................................................................................181.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGAA............................................................................................................................................................181.000.00-------------------------------------------------------------------------------------1.00------------------------------------------------
............................................................................GGGGCGGGCTCCGGCAG.............................................................................................................................................................171.000.00-------------------------------------------------------------------------------------------------------------------1.00------------------
.........................................................................CGCGGGGCGGGCTCCGCA...............................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------1.00-----------------------------------
.............................................................................GGGCGGGCTCCGGCTTG............................................................................................................................................................1711.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGTTG...........................................................................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGT.............................................................................................................................................................171.000.00---------------------------------------------------------------------1.00----------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGTCG...........................................................................................................................................................191.000.00--------------------------------------------------------------------------1.00-----------------------------------------------------------
........................................................................................................GGGAGCGGAGGAGGGAGTT...............................................................................................................................191.000.00------------------1.00-------------------------------------------------------------------------------------------------------------------
..............................................................................GGCGGGCTCCGGCTTGTTT.........................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------------------------1.00--------------------------
..................TGAAGAAGGCGCGGGGC.......................................................................................................................................................................................................................171.000.00------------------------------------------------------------------------------------------1.00-------------------------------------------
.............................................................................GGGCGGGCTCCGGCTGGT...........................................................................................................................................................181.000.00---------------------------------------------------------------------------------------------------------------1.00----------------------
..............................................................................................................GGAGGAGGGCGGGCGTTA..........................................................................................................................181.000.00-----------------------------------------------------------------------------------------------1.00--------------------------------------
............................................................................GGGGCGGGCTCCGGCGTGC...........................................................................................................................................................191.000.00----------------------------1.00---------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGGT............................................................................................................................................................181.000.00----------1.00---------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GCCAGCGTGGTCTTTTGG................................................................................181.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------
.................................................................................GGGCTCCGGCTTGGCGGAG......................................................................................................................................................191.000.00-------------------1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................ATGTGTCAGTCCGTGATGAA....................201.000.00---------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................GCTCGTTGCTCGGCGGAG....................................................................................................1811.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................ACTGCGGGGTGTCCCTGGCAGATGTGTCAGTCCGTG.........................3611.001.00--------------------------------------------------------------------------------1.00-----------------------------------------------------
.........................................................................CGCGGGGCGGGCTCCAAA...............................................................................................................................................................181.000.00------1.00-------------------------------------------------------------------------------------------------------------------------------
..........CGGGAAGGTGAAGAAG................................................................................................................................................................................................................................1611.001.00------------------------------------------------------------1.00-------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCAGG............................................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------------1.00------------------------------
........................................................................................................GGGAGCGGAGGAGGGTAA................................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------------
...........GGGAAGGTGAAGAAGGCG.............................................................................................................................................................................................................................1811.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCGTT............................................................................................................................................................181.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------
.......................AAGGCGCGGGAGAGCAGG.................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------------1.00--------------
........TACGGGAAGGTGAAG...................................................................................................................................................................................................................................1511.001.00-------------------------------------------------------------------------------------------------------------1.00------------------------
........................................................................................................................................................................................................................CAGTCCGTGATTGCAGG.................1711.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------
.............................................................................GGGCGGGCTCCGGCTGGAG..........................................................................................................................................................191.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCT..............................................................................................................................................................1630.670.67---------------------------------------------------------------------------------------------------------------------------0.330.33---------
................................................................................CGGGCTCCGGCTTGGCC.........................................................................................................................................................1720.500.50--------------------------------------------------------------------------------------------------------------------------0.50-----------
...........................................................................CGGGGCGGGCTCCGGCT..............................................................................................................................................................1720.500.50-------------------------------------------------------0.50------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TCCGTGATTGCAGGG................1530.330.33-------0.33------------------------------------------------------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCTGCG...........................................................................................................................................................1930.330.67----------------------------------------------------0.33---------------------------------------------------------------------------------
............................................................................GGGGCGGGCTCCGGCTGGTG..........................................................................................................................................................2030.330.67--0.33-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................GGAGCGGAGGAGGGC..................................................................................................................................1550.200.20---------------------------------------------------------------------------------------------------------------------------------0.20----
...........................................................................CGGGGCGGGCTCCGGC...............................................................................................................................................................1650.200.20-------------------------------------------------------0.20------------------------------------------------------------------------------
.................................................................................................................GGAGGGCGGGCGGCGGC........................................................................................................................1750.200.20------------------------------------------------------------------------------------------------------------------------------0.20-------
...................................................................................................CGGCAGGGAGCGGAG........................................................................................................................................1560.170.17----------------------------------------------------------------------------------------------------------------------------------0.17---
...................................................................................................CGGCAGGGAGCGGAGAA......................................................................................................................................1760.170.17------------------------------------------------------------------------------------------------------------------------------0.17-------
............GGAAGGTGAAGAAGGC..............................................................................................................................................................................................................................1690.110.11-----------------------------------------------------------0.11--------------------------------------------------------------------------

Antisense strand
AAGGCACCTACGGGAAGGTGAAGAAGGCGCGGGAGAGCTCGGGGCGCCTGGTGAGTGCGGCTCCCTCTCGCGGCGCGGGGCGGGCTCCGGCTTGGCCGCCGGCAGGGAGCGGAGGAGGGCGGGCGGCGGCTCGCTCGTTGCTCGGCGGAGAGGCCAGCGTGGTCTTTACCGCGCTGAGCTTGCGGGGCTACTGCGGGGTGTCCCTGGCAGATGTGTCAGTCCGTGATTGCAGGGACAGTGGTCGCAAACT
.......................................................................(((.(((((....))))))))..((((((.((...............)).))))))...........................................................................................................................
.......................................................................72.....................................................127.........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM532880(GSM532880)
G659T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR040007(GSM532892)
G601T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................CGCGGGGCGGGCTCCGC................................................................................................................................................................ 171.860.00--0.71--------------------0.14-----0.14--------------------0.14--0.290.14----------------------------------------------------------------------0.14-------0.14
....................................................................................................................................................................TTTACCGCGCTGAGCCGGC................................................................... 191.000.00----------------------------------------------------------------------1.00---------------------------------------------------------------
.................................................................................................................................................................................................................ACGGACTGACACATC.......................... 1511.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................CGCGGCGCGGGGCGGGGGG................................................................................................................................................................... 191.000.00--------------------------1.00-----------------------------------------------------------------------------------------------------------
.........................................................................GCCGGAGCCCGCCCCGCG............................................................................................................................................................... 1811.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................GGCCAGCGTGGTCTTCTGA................................................................................ 191.000.00-------------------------------------------------------------1.00------------------------------------------------------------------------
.........................................................................CGCGGGGCGGGCTCCGGGGA............................................................................................................................................................. 201.000.00----------------------------------------------------1.00---------------------------------------------------------------------------------
.........................................................................CGCGGGGCGGGCTCCGCCC.............................................................................................................................................................. 191.000.00---0.14----------------------0.140.140.14----------------------------0.14-------------------------------------------------------------------------0.140.14-
.........................................................................CGCGGGGCGGGCTCCG................................................................................................................................................................. 161.000.00-------------------------0.14------------------------0.29---0.14---0.14----------------------------------------------------------------0.140.14---------
.........................................................................CGCGGGGCGGGCTCCGG................................................................................................................................................................ 170.750.00------------------------0.25------------------------------0.25------------------------------------------------------------------------0.25-----
.........................................................................GGAGCCCGCCCCGCG.................................................................................................................................................................. 1570.710.71-----------------------0.29--------------------------------0.14----------------------------------------------------------------------0.29------
.........................................................................CGGAGCCCGCCCCGCG................................................................................................................................................................. 1640.500.50-------------------------------------------------------0.25---------------------------------------------------------------------0.25--------
...............................................................................................CGCTCCCTGCCGGCGG........................................................................................................................................... 1630.330.33---------------------------------------------------0.33----------------------------------------------------------------------------------