ID: uc001gtx.1_intron_5_0_chr1_197150248_r.3p
GENE: ZBTB41(4)
chr1:197150198-197150447-


(1)
BREAST
(8)
CELL-LINE
(1)
CERVIX
(1)
HEART
(2)
OTHER
(1)
SKIN

Sense strand
TTGTTAGATGCTGAGCCCTATACTTGGTTATAGGGATATGGAAATGTTATTCTAGGAATAAATAACCTAGAAGAGAAATTGCAGTGTATTATGACATATGCACCAATAGGATAGGCATGAACTTACAGCATACCTATTAAATTTAACTTAGTATCTCCTCTTTAAACTTTAAATGCACACTTTTTTTTTTTCCTTTTTAGGTCCTTTTCCATGTGATATATGTGGTCGCCAGTTTAACGACACTGGAAAT
...............................................................................................................................((((.....((((((((((...((......))..))))).)))))))))..........................................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR189784SRR189785SRR040038(GSM532923)
G531N. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
...............................................................................................................................................................................CACACTTTTTTTTTTTACTG.......................................................205.000.00---4.00-1.00--------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTG.....................................................223.000.00-1.001.00--1.00--------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTGAG..................................................243.000.001.00---2.00---------
...............................................................................................................................................................................CACACTTTTTTTTTTTCTTTG......................................................213.000.00-2.001.00-----------
...............................................................................................................................................................................CACACTTTTTTTTTTTCAAG.......................................................202.000.00-1.00---1.00--------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTCAG...................................................212.000.00-2.00------------
................................................................................................................................................................................ACACTTTTTTTTTTTCCAGAG.....................................................212.000.002.00-------------
...............................................................................................................................................................................CACACTTTTTTTTTTTATTG.......................................................202.000.00--2.00-----------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTACAG....................................................232.000.00-1.00-1.00----------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTGGT................................................262.000.002.00-------------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTAATG....................................................222.000.00--1.00--1.00--------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTAT.................................................231.000.001.00-------------
.................................................................................................................................................................................CACTTTTTTTTTTTCCTTTCT....................................................211.000.00------1.00-------
...............................................................................................................................................................................CACACTTTTTTTTTTTCAG........................................................191.000.00-1.00------------
................................................................................................................................CATACCTATTAAATTTAACTTAG...................................................................................................2311.001.00----------1.00---
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTACAG.................................................231.000.001.00-------------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTG..................................................241.000.00----1.00---------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTTT....................................................2311.001.00--1.00-----------
................................................................................................................................................................................ACACTTTTTTTTTTTCGGAG......................................................201.000.001.00-------------
.................................................................................................................................................................................CACTTTTTTTTTTTCCTTTTAAG..................................................231.000.00--1.00-----------
...............................................................................................................................................................................CACACTTTTTTTTTTTACAG.......................................................201.000.00-----1.00--------
..................................................................................................................................................................................ACTTTTTTTTTTTCCCGAC.....................................................191.000.001.00-------------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTCTTG....................................................221.000.00-1.00------------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTAAAG...................................................231.000.00-1.00------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTTAG................................................241.000.001.00-------------
...............................................................................................................................................................................CACACTTTTTTTTTTTCTAAG......................................................211.000.00-1.00------------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTTTAACG................................................271.000.00-1.00------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTAG.................................................231.000.00-1.00------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTGGTC...................................................211.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTCGAG................................................241.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTTCG................................................241.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAAAG.................................................231.000.00--1.00-----------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTG.....................................................211.000.00--1.00-----------
................................................................................................................................................................................ACACTTTTTTTTTTTCGGTT......................................................201.000.001.00-------------
.................................................................................................................................................................................CACTTTTTTTTTTTCCTTTTAAAG.................................................241.000.00--1.00-----------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTACAG................................................241.000.001.00-------------
...............................................................................................................................................................................CACACTTTTTTTTTTTCAAC.......................................................201.000.00------1.00-------
.....................................................................................................................................................................ACTTTAAATGCACACTTTTCC................................................................211.000.00-----------1.00--
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTTTG................................................261.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAAA..................................................221.000.00-1.00------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTCCC.................................................231.000.00----1.00---------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTGGGG....................................................221.000.00----1.00---------
....................................................................................................................................................................................TTTTTTTTTTTCCTTTTTACG.................................................211.000.00-1.00------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTAACCG...............................................251.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAAAT.................................................231.000.00-1.00------------
...............................................................................................................................................................................CACACTTTTTTTTTTTCACTG......................................................211.000.00--1.00-----------
.................................................................................................................................................................................CACTTTTTTTTTTTCCTTTTACAG.................................................241.000.00-1.00------------
....................................................................................................................................................................................TTTTTTTTTTTCCTTTTTAGCAGT..............................................241.000.00----1.00---------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTATTG.................................................251.000.00--1.00-----------
...................................................................................................................................................................................CTTTTTTTTTTTCCTTTTTATAG................................................231.000.00-1.00------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTGGC.................................................231.000.00----1.00---------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTTTTTTG................................................2711.001.00---1.00----------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAT...................................................211.000.00-----1.00--------
.............................................................................................................................................................................TGCACACTTTTTTTTTTTCCTGGAG....................................................251.000.00----1.00---------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTCAG..................................................221.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAGAG.................................................231.000.001.00-------------
.................................................................................................................................................................................CACTTTTTTTTTTTCCTTAAAG...................................................221.000.00--1.00-----------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTGGGC.................................................231.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTACT.................................................231.000.00------1.00-------
................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTGG.................................................251.000.00---1.00----------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTCGAG..................................................221.000.001.00-------------
.........................................................................................................................................................................................TTTTTTCCTTTTTAGGTC...............................................1811.001.00------1.00-------
............................................................................................................................................................................ATGCACACTTTTTTTCTGC...........................................................191.000.001.00-------------
..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTCATG................................................241.000.00-1.00------------
...................................................................................................................................................................................CTTTTTTTTTTTCCTTTTTACG.................................................221.000.00---1.00----------
.............................................................................................................................................................................TGCACACTTTTTTTTTTTC..........................................................1930.330.330.33-------------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTT.....................................................2230.330.33--0.33-----------
....................................................................................................................................................................................TTTTTTTTTTTCCTTTTTAGG.................................................2180.250.250.25-------------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTACTG...................................................2460.170.17-0.17------------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTAG.....................................................2260.170.17--0.17-----------
...............................................................................................................................................................................CACACTTTTTTTTTTTCCTT.......................................................2060.170.17--0.17-----------
...................................................................................................................................................................................CTTTTTTTTTTTCCTTTTTAG..................................................2170.140.14---------0.14----

Antisense strand
TTGTTAGATGCTGAGCCCTATACTTGGTTATAGGGATATGGAAATGTTATTCTAGGAATAAATAACCTAGAAGAGAAATTGCAGTGTATTATGACATATGCACCAATAGGATAGGCATGAACTTACAGCATACCTATTAAATTTAACTTAGTATCTCCTCTTTAAACTTTAAATGCACACTTTTTTTTTTTCCTTTTTAGGTCCTTTTCCATGTGATATATGTGGTCGCCAGTTTAACGACACTGGAAAT
...............................................................................................................................((((.....((((((((((...((......))..))))).)))))))))..........................................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR189784SRR189785SRR040038(GSM532923)
G531N. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
.................................................................CCTAGAAGAGAAATTAAAC...................................................................................................................................................................... 192.000.00--------2.00-----
...............................AGGGATATGGAAATGTCACG....................................................................................................................................................................................................... 201.000.00---------1.00----
.........................................................................................................................CTTACAGCATACCTATCA............................................................................................................... 181.000.00------------1.00-
..........................................................................................................................................................................................TTTTTCCTTTTTAGGTCATT............................................ 201.000.00-------1.00------
.....................................................................................................................................................AGTATCTCCTCTTTAGGGG.................................................................................. 191.000.00-------1.00------
.......ATGCTGAGCCCTATAGGTA................................................................................................................................................................................................................................ 191.000.00-------------1.00