| (1) BREAST | (8) CELL-LINE | (1) CERVIX | (1) HEART | (2) OTHER | (1) SKIN |
| TTGTTAGATGCTGAGCCCTATACTTGGTTATAGGGATATGGAAATGTTATTCTAGGAATAAATAACCTAGAAGAGAAATTGCAGTGTATTATGACATATGCACCAATAGGATAGGCATGAACTTACAGCATACCTATTAAATTTAACTTAGTATCTCCTCTTTAAACTTTAAATGCACACTTTTTTTTTTTCCTTTTTAGGTCCTTTTCCATGTGATATATGTGGTCGCCAGTTTAACGACACTGGAAAT ...............................................................................................................................((((.....((((((((((...((......))..))))).))))))))).......................................................................... ...........................................................................................................................124.........................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR444054(SRX128902) Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR189784 | SRR189785 | SRR040038(GSM532923) G531N. (cervix) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................CACACTTTTTTTTTTTACTG....................................................... | 20 | 5.00 | 0.00 | - | - | - | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTG..................................................... | 22 | 3.00 | 0.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTGAG.................................................. | 24 | 3.00 | 0.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCTTTG...................................................... | 21 | 3.00 | 0.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCAAG....................................................... | 20 | 2.00 | 0.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTCAG................................................... | 21 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCAGAG..................................................... | 21 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTATTG....................................................... | 20 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTACAG.................................................... | 23 | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTGGT................................................ | 26 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTAATG.................................................... | 22 | 2.00 | 0.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTAT................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CACTTTTTTTTTTTCCTTTCT.................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCAG........................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................CATACCTATTAAATTTAACTTAG................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTACAG................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTG.................................................. | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTTT.................................................... | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCGGAG...................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CACTTTTTTTTTTTCCTTTTAAG.................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTACAG....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCCGAC..................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTCTTG.................................................... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTAAAG................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTTAG................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCTAAG...................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTTTAACG................................................ | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTAG................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTGGTC................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTCGAG................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTTTCG................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAAAG................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTG..................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCGGTT...................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CACTTTTTTTTTTTCCTTTTAAAG................................................. | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTACAG................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCAAC....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................ACTTTAAATGCACACTTTTCC................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTTTG................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAAA.................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTCCC................................................. | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTGGGG.................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................TTTTTTTTTTTCCTTTTTACG................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTAACCG............................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAAAT................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCACTG...................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CACTTTTTTTTTTTCCTTTTACAG................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................TTTTTTTTTTTCCTTTTTAGCAGT.............................................. | 24 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTATTG................................................. | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................CTTTTTTTTTTTCCTTTTTATAG................................................ | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTGGC................................................. | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTTTTTTG................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAT................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TGCACACTTTTTTTTTTTCCTGGAG.................................................... | 25 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTCAG.................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTAGAG................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................CACTTTTTTTTTTTCCTTAAAG................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTGGGC................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTACT................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACACTTTTTTTTTTTCCTTTTTTGG................................................. | 25 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTCGAG.................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................TTTTTTCCTTTTTAGGTC............................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................ATGCACACTTTTTTTCTGC........................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACTTTTTTTTTTTCCTTTTTCATG................................................ | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................CTTTTTTTTTTTCCTTTTTACG................................................. | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TGCACACTTTTTTTTTTTC.......................................................... | 19 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTTT..................................................... | 22 | 3 | 0.33 | 0.33 | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTTTTTTTTTCCTTTTTAGG................................................. | 21 | 8 | 0.25 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTACTG................................................... | 24 | 6 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTTAG..................................................... | 22 | 6 | 0.17 | 0.17 | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CACACTTTTTTTTTTTCCTT....................................................... | 20 | 6 | 0.17 | 0.17 | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTTTTTTTTTTTCCTTTTTAG.................................................. | 21 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - |
| TTGTTAGATGCTGAGCCCTATACTTGGTTATAGGGATATGGAAATGTTATTCTAGGAATAAATAACCTAGAAGAGAAATTGCAGTGTATTATGACATATGCACCAATAGGATAGGCATGAACTTACAGCATACCTATTAAATTTAACTTAGTATCTCCTCTTTAAACTTTAAATGCACACTTTTTTTTTTTCCTTTTTAGGTCCTTTTCCATGTGATATATGTGGTCGCCAGTTTAACGACACTGGAAAT ...............................................................................................................................((((.....((((((((((...((......))..))))).))))))))).......................................................................... ...........................................................................................................................124.........................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR444054(SRX128902) Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR189784 | SRR189785 | SRR040038(GSM532923) G531N. (cervix) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................CCTAGAAGAGAAATTAAAC...................................................................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | |
| ...............................AGGGATATGGAAATGTCACG....................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .........................................................................................................................CTTACAGCATACCTATCA............................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ..........................................................................................................................................................................................TTTTTCCTTTTTAGGTCATT............................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .....................................................................................................................................................AGTATCTCCTCTTTAGGGG.................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .......ATGCTGAGCCCTATAGGTA................................................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |