ID: uc001gpj.1_intron_3_0_chr1_182551394_r.5p
GENE: (2)
chr1:182553016-182553265-


(1)
AGO2.ip
(1)
BRAIN
(1)
BREAST
(7)
CELL-LINE
(1)
CERVIX
(6)
HEART
(1)
LIVER
(2)
OTHER
(19)
SKIN

Sense strand
AGAGCATCAAGTGGGCTGGAGATCCACAGGAAGTCAAGAGAGATCTAGAGGTAAATTCTACAATCCAGTTTACCTTTCTTCTTTCTGCTTCCTTATTCTTTCATGTAGTAGTCAGGGTTCTCTAGAGGGACAGAACTAGTAGGACATATGTATATATGAAAGGGAGTTTATTAAGGAGAATTGACTCACACGGTCACAACATAAAGTCCCATAATAAGCCATCTGCAAGTTGAGGAACAAGGAAGCCAGT
........................................................................(((((((((((((((..((((.(((((.......)).))).)))).....)))))))).)))).....)))...........................................................................................................
.....................................................................70........................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
.........................................................................................................................CTAGAGGGACAGAACTCTG..............................................................................................................1921.000.00-2.002.002.001.00-2.001.00-3.001.002.001.00-1.00--------1.00-------1.00-1.00-------
........................................................................................................................TCTAGAGGGACAGAACTCTG..............................................................................................................2020.000.00-4.00-3.003.00-1.002.00--1.00--1.00--1.001.00--1.00--------1.00--1.00--------
.......................................................................................................................CTCTAGAGGGACAGAACTCTG..............................................................................................................214.000.00--1.00-------1.00-1.00---------------1.00------------
...............................................................................................................TCAGGGTTCTCTAGAGGGACAGAAATAG...............................................................................................................283.000.00-----3.00-----------------------------------
......................................................................................................................TCTCTAGAGGGACAGAACTCTG..............................................................................................................223.000.00--1.00----------1.00-1.00-------------------------
................................................................................................................................................CATATGTATATATGAACG........................................................................................183.000.00--------3.00--------------------------------
...........TGGGCTGGAGATCCACAGGAAGCC.......................................................................................................................................................................................................................243.000.003.00----------------------------------------
.....................................................................................................................TTCTCTAGAGGGACAGAACTCTG..............................................................................................................232.000.00--1.00-1.00------------------------------------
...........................................................................................................................AGAGGGACAGAACTAGTAGGAGT........................................................................................................231.000.00---------------------1.00-------------------
............................................CTAGAGGTAAATTCTTGG............................................................................................................................................................................................181.000.00------------------------------------1.00----
......TCAAGTGGGCTGGAGGTA..................................................................................................................................................................................................................................181.000.00--------------------------1.00--------------
..........................................................................TTTCTTCTTTCTGCTTCCGTAA..........................................................................................................................................................221.000.00------------------------------1.00----------
............................................................................................................................................................TGAAAGGGAGTTTATTAAGGAGAATTCTG.................................................................291.000.00--------------1.00--------------------------
...................................................................................TCTGCTTCCTTATTCGGAA....................................................................................................................................................191.000.00------------------------1.00----------------
...........................................................................................................................................TAGGACATATGTATATATGAAAGGGAGGTT.................................................................................301.000.001.00----------------------------------------
.....................................................................................................................TTCTCTAGAGGGACAGAACTAGCAGG...........................................................................................................261.000.001.00----------------------------------------
.......................CCACAGGAAGTCAAGAGAGATCTAGAGGACC....................................................................................................................................................................................................311.000.00-------------------------1.00---------------
...........................................................................................................................................................................TAAGGAGAATTGACTCACACGGTCAC.....................................................2650.200.20----------------------------------------0.20

Antisense strand
AGAGCATCAAGTGGGCTGGAGATCCACAGGAAGTCAAGAGAGATCTAGAGGTAAATTCTACAATCCAGTTTACCTTTCTTCTTTCTGCTTCCTTATTCTTTCATGTAGTAGTCAGGGTTCTCTAGAGGGACAGAACTAGTAGGACATATGTATATATGAAAGGGAGTTTATTAAGGAGAATTGACTCACACGGTCACAACATAAAGTCCCATAATAAGCCATCTGCAAGTTGAGGAACAAGGAAGCCAGT
........................................................................(((((((((((((((..((((.(((((.......)).))).)))).....)))))))).)))).....)))...........................................................................................................
.....................................................................70........................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
...............................................................................................................TCAGGGTTCTCTAGAGAG......................................................................................................................... 181.000.00---------------------------1.00-------------
............................TAGATCTCTCTTGACTTCC........................................................................................................................................................................................................... 1911.001.00----------------------1.00------------------
............................................................................................................................................................TGAAAGGGAGTTTATTAAG........................................................................... 191.000.00-------------------1.00---------------------
.......................CCACAGGAAGTCAAGCA.................................................................................................................................................................................................................. 171.000.00-----------------------------------1.00-----
.................GGAGATCCACAGGAAGTCCCT.................................................................................................................................................................................................................... 211.000.00-------------------------------------1.00---
....................................................................................................................................................................................................................AATAAGCCATCTGCATTGC................... 191.000.001.00----------------------------------------
............................................................................................................TAGTCAGGGTTCTCTAGAGGGGCCC..................................................................................................................... 251.000.00------------------1.00----------------------
.........................................................................CTTTCTTCTTTCTGCTCACG............................................................................................................................................................. 201.000.00----------------------------------1.00------
.............................................................................................................AGTCAGGGTTCTCTAGGC........................................................................................................................... 181.000.00--------------------------------------1.00--
..............TCCTGTGGATCTCCAGC........................................................................................................................................................................................................................... 1730.330.33---------------------------------------0.33-