| (1) BRAIN | (1) BREAST | (9) CELL-LINE | (2) CERVIX | (1) HEART | (2) HELA | (3) OTHER | (5) SKIN |
| CCCAATGTGCTGGGATTATAGGCAAGAGCCACTGCACCCAGCCTAGAAATTTTTTAAATAAATTATGCATCCACGTTTTTAACCACCTGGGAGTTACCCGAATATTTTTGCTCTTTTTATTAATTTCTCACTGTTGTCTTGTAAAATGTACAGTCTAAAAGTTGGATATTATTTATAGTGTACTGTTTTTTATTTTTTAGATAAAACCACCAGATCATCTAGTCAATATATAGAATCATTTTGGCAGTCA ........................................................................................................................((((.(((.(((.(((..(((((.....)))))..))).))).))).))))............................................................................... ...................................................................................................100......................................................................172............................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR189782 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | SRR343334 | SRR189784 | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | GSM532874(GSM532874) G699T. (cervix) | SRR040031(GSM532916) G013T. (cervix) | GSM450603(GSM450603) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577744(Rovira) total RNA. (breast) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................TTTTTGCTCTTTTTATTC................................................................................................................................ | 18 | 55.00 | 0.00 | 53.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ...................................................................................................................................TGTTGTCTTGTAAAATGTACAGTCTAAAAGTTGGATATTATTTATAGTGTACTGTTTTTTATTTTTTAG.................................................. | 69 | 1 | 8.00 | 8.00 | - | - | 7.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTTTTGCTCTTTTTATCC................................................................................................................................ | 18 | 7.00 | 0.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................CAGTCTAAAAGTTGGATA.................................................................................. | 18 | 1 | 5.00 | 5.00 | - | - | - | - | - | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TAGTGTACTGTTTTTTTG......................................................... | 18 | 3.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................TAGGCAAGAGCCACTGCACCCAGCCTGC............................................................................................................................................................................................................ | 28 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TATAGTGTACTGTTTTTTATTTTCTAG.................................................. | 27 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................ATAAAACCACCAGATCATCTAGTCAATATACAG................. | 33 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................ATAGGCAAGAGCCACTGCACGGTC................................................................................................................................................................................................................. | 24 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................TAGGCAAGAGCCACTGCACCCAGCCTG............................................................................................................................................................................................................. | 27 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................CTAGTCAATATATAGAATCATTTTGGC..... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................ACTGTTTTTTATTTTTCTGG................................................. | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................ATAGAATCATTTTGGCAG... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TAGTGTACTGTTTTTGTG......................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................TATAGAATCATTTTGGCAGTCACCAC | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................TTTTGCTCTTTTTATTTTTG............................................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................TAAAACCACCAGATCATCTA............................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................TAGTGTACTGTTTTTTATTTG...................................................... | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................AGTGTACTGTTTTTTATTTTTCAG.................................................. | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TAGTGTACTGTTTTTTTCTG....................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...AATGTGCTGGGATTATAG..................................................................................................................................................................................................................................... | 18 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TTTTTGCTCTTTTTATTCTTT............................................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TAGTGTACTGTTTTTTGCTT....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................ATGCATCCACGTTTTTAACCACCTGGGAG............................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................ACCAGATCATCTAGTCAAT....................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TTAACCACCTGGGAGTAGC......................................................................................................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................AGATAAAACCACCAGATCATCTAGTC.......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TACTGTTTTTTATTTTTCTGG................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................TAGTCAATATATAGAATC............. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................TTAATTTCTCACTGTGACC................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................TTTTTGCTCTTTTTATC................................................................................................................................. | 17 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................TATATAGAATCATTTTGG...... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .........................................................................................................................................................................................................................TCTAGTCAATATATAG................. | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ........................................................................................................................................................................................................ATAAAACCACCAGATCA................................. | 17 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |
| CCCAATGTGCTGGGATTATAGGCAAGAGCCACTGCACCCAGCCTAGAAATTTTTTAAATAAATTATGCATCCACGTTTTTAACCACCTGGGAGTTACCCGAATATTTTTGCTCTTTTTATTAATTTCTCACTGTTGTCTTGTAAAATGTACAGTCTAAAAGTTGGATATTATTTATAGTGTACTGTTTTTTATTTTTTAGATAAAACCACCAGATCATCTAGTCAATATATAGAATCATTTTGGCAGTCA ........................................................................................................................((((.(((.(((.(((..(((((.....)))))..))).))).))).))))............................................................................... ...................................................................................................100......................................................................172............................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR189782 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | SRR343334 | SRR189784 | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | GSM532874(GSM532874) G699T. (cervix) | SRR040031(GSM532916) G013T. (cervix) | GSM450603(GSM450603) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577744(Rovira) total RNA. (breast) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................CCTGGGAGTTACCCGCGAG.................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .....................................................................................CCTGGGAGTTACCCGAGC................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ............................CCACTGCACCCAGCCTAGAAAGTT...................................................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................AATTTCTCACTGTTGGGCG.............................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ..............................................................TTATGCATCCACGTTAAA.......................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .........................ATTTCTAGGCTGGGTGCAGTGGCTC........................................................................................................................................................................................................ | 25 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |