ID: uc001ggs.2_intron_10_0_chr1_169845233_r.3p
GENE: SCYL3(3)
chr1:169845183-169845432-


(1)
B-CELL
(1)
BREAST
(7)
CELL-LINE
(2)
LIVER
(1)
OTHER
(11)
SKIN

Sense strand
TCATTCAATTTGTTGTTTCTTAAAGTTATAGTTCCATTTATTATGCCACAAGTGGGAAGGCTTGTCATAATTTTTTTGGTGATTAGTATTTAGTTTTTTAAAATAAAGATTGTGAGAGATGGAGAAAAACATCTTTTGAAGTAAATTTCTATTTCAGATCCTGGAGTGGCACTCTTCCTTCTGTTCTTTTTTTTTTCCAGGGACACCTAACACACAATAATGTCTGTTTATCATCTGTGTTTGTGAGTGA
...................................................................................................((((.(((((....((((((((........))))))))((((.......(((((((((...)))))))))........))))...))))).))))....(((....)))..........................................
..................................................................................................99.............................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR189783SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................................................................................................CTTTTTTTTTTCCAGGGGGAG............................................2144.000.0023.0015.00---3.003.00----------------
................................................CAAGTGGGAAGGCTTCGG........................................................................................................................................................................................187.000.00----3.00--2.001.00---1.00----------
................................................CAAGTGGGAAGGCTTCGGT.......................................................................................................................................................................................195.000.00--------1.002.00----1.00--1.00-----
...............................................................................................TTTTAAAATAAAGATTGTGAGAGATG.................................................................................................................................2613.003.00--3.00--------------------
................................................CAAGTGGGAAGGCTTCG.........................................................................................................................................................................................173.000.00-----------1.00-1.00-1.00-------
.......................................................................................................TAAAGATTGTGAGAGATGGA...............................................................................................................................2012.002.00----------2.00------------
......................................................................................................ATAAAGATTGTGAGAGATGGAGAAA...........................................................................................................................2511.001.00----------------1.00------
.....................................................................................................................................................................................TGTTCTTTTTTTTTTCGATC.................................................201.000.001.00----------------------
..................................................................................................................................................................................TTCTGTTCTTTTTTTTTCATC...................................................211.000.00---1.00-------------------
.....................................................................................................................................................................................TGTTCTTTTTTTTTTCGATT.................................................201.000.001.00----------------------
....................................................TGGGAAGGCTTGTCATAATTTTTG..............................................................................................................................................................................241.000.00--1.00--------------------
....................................................................................................................................................................................CTGTTCTTTTTTTTTGCTC...................................................191.000.00---1.00-------------------
...........................................................................................AGTTTTTTAAAATAAAGATTGTGAGAGATGGAG..............................................................................................................................3311.001.00------------------1.00----
...................................................................................................................................................................................TCTGTTCTTTTTTTTTGAGC...................................................201.000.00---1.00-------------------
...............................................................................................................................................................................TCCTTCTGTTCTTTTTTT.........................................................1840.250.25--0.25--------------------
......................................................................................................................................................................................GTTCTTTTTTTTTTCCAG..................................................1880.120.12----------------------0.12
..................................................................................................................................................................................TTCTGTTCTTTTTTTTTTC.....................................................1990.110.11---0.11-------------------
..................................................................................................................................................................................TTCTGTTCTTTTTTTTTTCTTG..................................................2290.110.11---0.11-------------------

Antisense strand
TCATTCAATTTGTTGTTTCTTAAAGTTATAGTTCCATTTATTATGCCACAAGTGGGAAGGCTTGTCATAATTTTTTTGGTGATTAGTATTTAGTTTTTTAAAATAAAGATTGTGAGAGATGGAGAAAAACATCTTTTGAAGTAAATTTCTATTTCAGATCCTGGAGTGGCACTCTTCCTTCTGTTCTTTTTTTTTTCCAGGGACACCTAACACACAATAATGTCTGTTTATCATCTGTGTTTGTGAGTGA
...................................................................................................((((.(((((....((((((((........))))))))((((.......(((((((((...)))))))))........))))...))))).))))....(((....)))..........................................
..................................................................................................99.............................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR189783SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................TTTAAAATAAAGATTCGTT....................................................................................................................................... 191.000.00--1.00--------------------
...................................................GTGGGAAGGCTTGTCGCA..................................................................................................................................................................................... 181.000.00-------------------1.00---
......................................................................................................................................................................................................................ATAAACAGACATTATTG................... 1720.500.50--------------------0.50--
.........................................................................................................................................................................AGAACAGAAGGAAGAGTG............................................................... 1820.500.50---------------------0.50-