ID: uc001ges.2_intron_2_0_chr1_167889870_r.3p
GENE: (2)
chr1:167889820-167890069-


(3)
B-CELL 		(3)
BRAIN 		(1)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(5)
HEART 		(9)
LIVER 		(1)
OTHER 		(1)
SKIN 		(2)
UTERUS

Sense strand
AAATAAAATTAGTTCAAAAAGCAGTTTTTTAATTCATTGTGCTTTTTTTTTGTTGTAATCTACATTTTCTTAATGAATGGACACTAAAATTATAGCTGCTAACTTACGGAAATCTCAAAAATGTCTTGTGCTTGATTTAAAGTTAAAACTATTACTCCACATTTGTGATACTTTTTTTCTTTCTATGCGTTAATGTGTAGGGGTTGGTGTGTGCTGGATTGGCTGATATGGCCAGACCTGCAGAAAAACT
................................................................................................................................(((..((....(((..((((.((((((.........)))))).))))...)))))...))).............................................................
........................................................................................................................121......................................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784SRR189785SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334
.............................................................................................................................TTGTGCTTGATTTAACCAT..........................................................................................................1933.000.0017.00--2.00---5.003.00---2.00---1.00---1.00--1.00---------1.00-------
.............................................................................................................................TTGTGCTTGATTTAAACATG.........................................................................................................2010.000.006.00--2.002.00------------------------------------
.............................................................................................................................TTGTGCTTGATTTAAATATG.........................................................................................................205.000.005.00----------------------------------------
.............................................................................................................................TTGTGCTTGATTTAACCAG..........................................................................................................194.000.004.00----------------------------------------
.............................................................................................................................TTGTGCTTGATTTAACCA...........................................................................................................184.000.002.00--------------1.00-------------------1.00-----
...............................................................................................................................................................................................................................TGATATGGCCAGACCTGC.........1812.002.00----------1.00---------------------1.00--------
..................................................................................................................................................................................................................................TATGGCCAGACCTGCAGAAAA...2112.002.00--1.00--1.00-----------------------------------
.........................................................................................................................................................................................................GGTTGGTGTGTGCTGGATTGGCTGA........................2512.002.00-1.00---1.00-----------------------------------
.........................................................................................................................................................................................................GGTTGGTGTGTGCTGGATTGGCTGAT.......................2612.002.00--1.00--1.00-----------------------------------
..................................................................................................................................................................................................................................TATGGCCAGACCTGCAGAAAAAC.2312.002.00-2.00---------------------------------------
..........................................................................................................................................................................CTTTTTTTCTTTCTATTCAG............................................................202.000.00----2.00------------------------------------
.............................................................................................................................TTGTGCTTGATTTAAATATT.........................................................................................................202.000.002.00----------------------------------------
..................................................................................................................................................................................................................................TATGGCCAGACCTGCAGAAA....2012.002.00-2.00---------------------------------------
.............................................................................................................................................................................................................GGTGTGTGCTGGATTGGCT..........................1912.002.00-----1.00----------------------------1.00------
.....................................TGTGCTTTTTTTTTGGATC..................................................................................................................................................................................................192.000.00------2.00----------------------------------
.............................................................................................................................TTGTGCTTGATTTAACTA...........................................................................................................182.000.001.00--1.00-------------------------------------
.............................................................................................................................TTGTGCTTGATTTAATCAT..........................................................................................................191.000.001.00----------------------------------------
.............................................................................................................................TTGTGCTTGATTTAAACCAG.........................................................................................................201.000.001.00----------------------------------------
.............................................................................................................................TTGTGCTTGATTTAACCG...........................................................................................................181.000.001.00----------------------------------------
...............................................................................................................................................................................................................................TGATATGGCCAGACCTGCAGAAAA...2411.001.00---------1.00-------------------------------
.......................................................................................................................................................................................................GGGGTTGGTGTGTGCTGGATTGGCTGA........................2711.001.00--1.00--------------------------------------
...................................................................................................................................................................................................................................ATGGCCAGACCTGCAGAAAAAG.221.000.00-1.00---------------------------------------
..........................................................................................................................................................................................................................................GACCTGCAGAAAAACTTTT191.000.00-----------------1.00-----------------------
......................................................................................................................................................................................................AGGGGTTGGTGTGTGCTGTCC...............................211.000.00------1.00----------------------------------
.............................................................................................................................TTGTGCTTGATTTAAACACG.........................................................................................................201.000.00---1.00-------------------------------------
.............................................................................................................................TTGTGCTTGATTTAATAAT..........................................................................................................191.000.001.00----------------------------------------
...................................................................................................................................................................................................................................ATGGCCAGACCTGCAGAAAAACT2311.001.00-----------1.00-----------------------------
...................................................................................................................................................................................................................................ATGGCCAGACCTGCAGAAAA...2011.001.00-------------------1.00---------------------
.......................................................................................................................................................................ATACTTTTTTTCTTTGAC.................................................................181.000.00------1.00----------------------------------
.............................................................................................................................TTGTGCTTGATTTAAACAT..........................................................................................................191.000.001.00----------------------------------------
...................................................................................................................................................................................................................................ATGGCCAGACCTGCAGAAAAACTTT2511.001.00-1.00---------------------------------------
.......................................................................................................................................................................................................................................CCAGACCTGCAGAAAAAC.1811.001.00------------------------------------1.00----
...................................................................................................................................................................................................................................ATGGCCAGACCTGCAGAAA....1911.001.00-1.00---------------------------------------
.......................................................................................................................................................................................................GGGGTTGGTGTGTGCTGGATTGGCT..........................2511.001.00--1.00--------------------------------------
.........................................................................................................................................................................................................GGTTGGTGTGTGCTGGATTGGCT..........................2311.001.00--1.00--------------------------------------
.............................................................................................................................TTGTGCTTGATTTAAACAAG.........................................................................................................201.000.001.00----------------------------------------
..............................................................................................................................................................................................................GTGTGTGCTGGATTGGCTGATC......................221.000.00-----1.00-----------------------------------
..................................CATTGTGCTTTTTTTTTCTTG...................................................................................................................................................................................................211.000.001.00----------------------------------------
...............................................................................................................................................................................................................................TGATATGGCCAGACCTGCAGAAAAACT2711.001.00--1.00--------------------------------------
...............................................................................GACACTAAAATTATAGCT.........................................................................................................................................................1811.001.00--1.00--------------------------------------
..................................................................................................................................................................................................................................TATGGCCAGACCTGCAGAAAAATTTT261.000.00-1.00---------------------------------------
................................................................................ACACTAAAATTATAGCTGCTAACTTACG..............................................................................................................................................2811.001.001.00----------------------------------------
.............................................................................................................................TTGTGCTTGATTTAACCTG..........................................................................................................191.000.001.00----------------------------------------
.............................................................................................................................................................................................................GGTGTGTGCTGGATTGGCTGATAT.....................2411.001.00----------------------1.00------------------
..........................................................................................................................................................................CTTTTTTTCTTTCTATTCG.............................................................191.000.00-------------------------------------1.00---
.............................................................................................................................TTGTGCTTGATTTAAACATA.........................................................................................................201.000.00----1.00------------------------------------
.............................................................................................................................TTGTGCTTGATTTAATTAG..........................................................................................................191.000.001.00----------------------------------------
....................................TTGTGCTTTTTTTTTGGATC..................................................................................................................................................................................................201.000.00-------------------------1.00---------------
......................................................................................................................................................................................................................TGGATTGGCTGATATGGC..................1811.001.00--------------1.00--------------------------
.............................................................................................................................TTGTGCTTGATTTAAAGATG.........................................................................................................201.000.001.00----------------------------------------
........................................................................................................................................................................................................................................CAGACCTGCAGAAAAACTA1911.001.00--------------------------------------1.00--
.........................................CTTTTTTTTTGTTGTAAG...............................................................................................................................................................................................181.000.00--1.00--------------------------------------
........................................................................................................................................................................................................GGGTTGGTGTGTGCTGGATTGGCTGAT.......................2711.001.00-----------1.00-----------------------------
........................................................................................................................................................................................................................................CAGACCTGCAGAAAAACT1811.001.00--1.00--------------------------------------
.............................................................................................................................TTGTGCTTGATTTAACAGG..........................................................................................................191.000.001.00----------------------------------------
................................................................................................................................................................................................................................GATATGGCCAGACCTGGA........181.000.00-----1.00-----------------------------------
.............................................................................................................................TTGTGCTTGATTTAAATATC.........................................................................................................201.000.001.00----------------------------------------
..................................................................................................................................................................................................................GTGCTGGATTGGCTGATATGGC..................2211.001.00------------------------1.00----------------
.................................................................................................................................................................................................................TGTGCTGGATTGGCTGATATGGCC.................2411.001.00----------1.00------------------------------
.......................................TGCTTTTTTTTTGTTGCG.................................................................................................................................................................................................181.000.00------1.00----------------------------------
.......................................................................................................................................................................ATACTTTTTTTCTTTCTAAAG..............................................................211.000.00---------------------------------------1.00-
............................................................................................................................................................................................................TGGTGTGTGCTGGATTGGCT..........................2011.001.00-------------1.00---------------------------
..........................................................................................................................................................................................................................................GACCTGCAGAAAAACTTT181.000.00---------------------------1.00-------------
.......................................................................................................................................................................................................GGGGTTGGTGTGTGCTGGATTGGCTGAT.......................2811.001.00--1.00--------------------------------------
......................................................................................................................................................................................................................................GCCAGACCTGCAGAAAAAC.1911.001.00---------1.00-------------------------------
.............................................................................................................................TTGTGCTTGATTTAACGTG..........................................................................................................191.000.00----------------------------1.00------------
..................................................................................................................................................................................................................................TATGGCCAGACCTGCAGAAAAACT2411.001.00-1.00---------------------------------------
.....................................................................................................................................................................................................................CTGGATTGGCTGATATGG...................1811.001.00---------------------1.00-------------------
.............................................................................................................................................................................................................GGTGTGTGCTGGATTGGCTGGTA......................231.000.00------------------1.00----------------------
..................................................................................................................................................................................................................................TATGGCCAGACCTGCAGAAAAT..2211.002.00-1.00---------------------------------------
............................................................................................................................................................................................................TGGTGTGTGCTGGATTGGC...........................1920.500.50---------0.50-------------------------------
..................................................................................................................................................AACTATTACTCCACA.........................................................................................1570.140.14----------------------------------------0.14

Antisense strand
AAATAAAATTAGTTCAAAAAGCAGTTTTTTAATTCATTGTGCTTTTTTTTTGTTGTAATCTACATTTTCTTAATGAATGGACACTAAAATTATAGCTGCTAACTTACGGAAATCTCAAAAATGTCTTGTGCTTGATTTAAAGTTAAAACTATTACTCCACATTTGTGATACTTTTTTTCTTTCTATGCGTTAATGTGTAGGGGTTGGTGTGTGCTGGATTGGCTGATATGGCCAGACCTGCAGAAAAACT
................................................................................................................................(((..((....(((..((((.((((((.........)))))).))))...)))))...))).............................................................
........................................................................................................................121......................................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784SRR189785SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334
......................AGTTTTTTAATTCATTTTTT................................................................................................................................................................................................................ 201.000.00---1.00-------------------------------------
....................................TTGTGCTTTTTTTTTGTCTCT................................................................................................................................................................................................. 211.000.00------------------------------1.00----------
....................................TTGTGCTTTTTTTTTGTACCT................................................................................................................................................................................................. 211.000.00--------------------------1.00--------------
.......................................................................................................................................................................ATACTTTTTTTCTTTCTAGTAT............................................................. 221.000.00-----------------------------1.00-----------
.......................................................................................................................................................................ATACTTTTTTTCTTTCTAGTGT............................................................. 221.000.00-------------------------------1.00---------
.............................................................................................................................TTGTGCTTGATTTAACATA.......................................................................................................... 191.000.00---1.00-------------------------------------
............................................................................................................................................AGTTAAAACTATTACGT............................................................................................. 171.000.00----1.00------------------------------------