ID: uc001gar.2_intron_3_0_chr1_161518822_r.5p
GENE: (1)
chr1:161519287-161519536-


(1)
AGO2.ip 		(13)
BRAIN 		(11)
BREAST 		(7)
CELL-LINE 		(1)
HEART 		(7)
LIVER 		(1)
OTHER 		(5)
SKIN 		(3)
UTERUS

Sense strand
GTGTGGCATCATGTGGCAGCTGCTCCTCCCAACTGCTCTGCTACTTCTAGGTAAGTCAGGGTCTCCCTGGTTGAGGGAGAAGTTTGAGATGCCTTGGGTTCAGCAGAGACCCCTTTTCAGGCTACGAATGAGACTCCCACGAAGGGATGGGACCCCTCACCACATCTATAGCTGTGGATTGAGCTCCTAGGACAAGCCAAGATGGGGCTAGAAATGAGGAGAATGCTGGTTCCAATTGGGGCATACTCAT
..........................................................................(((((..(((((....((((.(((.((......)).))).....))))..)))))....)))))................................................................................................................
..................................................................67......................................................................139.............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577746(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577738(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189783SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		TAX577742(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................TGAGGGAGAAGTTTGTGCT................................................................................................................................................................1920.000.009.00-1.00-----1.002.001.001.00-1.002.00-----1.00--1.00--------------------------
....................................................................................................................................................................TCTATAGCTGTGGATC......................................................................1613.000.00-13.00------------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTAT.................................................................................................................................................................1811.000.00--1.00-1.002.002.00-1.00--------1.00-1.00------------1.00-----1.00-----------
.......................................................................TGAGGGAGAAGTTTGTGC.................................................................................................................................................................189.000.005.00-1.00----1.00--------------------------1.00----1.00----------
.......................................................................TGAGGGAGAAGTTTGAGATGTT.............................................................................................................................................................227.000.00----1.001.00-1.00--1.00-2.00-------------1.00-----------------------
.......................................................................TGAGGGAGAAGTTTGTACA................................................................................................................................................................197.000.00---3.002.00-1.00------------------------1.00------------------
.......................................................................TGAGGGAGAAGTTTGTGGT................................................................................................................................................................197.000.006.00---------------------------1.00---------------------
.......................................................................TGAGGGAGAAGTTTGTGAT................................................................................................................................................................194.000.00--1.00-1.00----------1.001.00---------------------------------
.......................................................................TGAGGGAGAAGTTTGAACAG...............................................................................................................................................................203.000.00--1.002.00----------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTATA................................................................................................................................................................193.000.001.00-1.00---1.00-------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTAC.................................................................................................................................................................183.000.00---1.00----1.00------1.00----------------------------------
.......................................................................TGAGGGAGAAGTTTGCGCT................................................................................................................................................................192.000.00-----1.00-------1.00------------------------------------
.......................................................................TGAGGGAGAAGTTTGAGCTG...............................................................................................................................................................202.000.00------------------1.00------------------1.00------------
.......................................................................TGAGGGAGAAGTTTGAGATGTTA............................................................................................................................................................232.000.00-----1.00-----------------------------1.00--------------
.......................................................................TGAGGGAGAAGTTTGTGA.................................................................................................................................................................182.000.00-------------------1.00--------------------1.00---------
.......................................................................TGAGGGAGAAGTTTGCAT.................................................................................................................................................................182.000.00-----1.00-1.00------------------------------------------
......................................................................................................................AGGCTACGAATGAGAGG...................................................................................................................172.000.00-----------2.00--------------------------------------
.......................................................................TGAGGGAGAAGTTTGTTCT................................................................................................................................................................192.000.00--------------1.00--1.00--------------------------------
.......................................................................TGAGGGAGAAGTTTGAGATGTTT............................................................................................................................................................231.000.00----1.00---------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTGG.................................................................................................................................................................181.000.00-------------------------------------------1.00------
.......................................................................TGAGGGAGAAGTTTGAGATGT..............................................................................................................................................................211.000.00-------1.00------------------------------------------
...............................ACTGCTCTGCTACTTCTAGTTT.....................................................................................................................................................................................................221.000.00-----------------------------------------1.00--------
.......................................................................TGAGGGAGAAGTTTGAGATGTA.............................................................................................................................................................221.000.00----------------------1.00---------------------------
.......................................................................TGAGGGAGAAGTTTGTGTT................................................................................................................................................................191.000.001.00-------------------------------------------------
.......................................................................TGAGGGAGAAGTTTGAGAAGGT.............................................................................................................................................................221.000.00--1.00-----------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTGGG................................................................................................................................................................191.000.001.00-------------------------------------------------
.......................................................................TGAGGGAGAAGTTTGGAC.................................................................................................................................................................181.000.00---------------------1.00----------------------------
.......................................................................TGAGGGAGAAGTTTGGAA.................................................................................................................................................................181.000.00--------1.00-----------------------------------------
.......................................................................TGAGGGAGAAGTTTGTTTG................................................................................................................................................................191.000.00--1.00-----------------------------------------------
.......................................................................TGAGGGAGAAGTTTGAGAGGTT.............................................................................................................................................................221.000.00----------------------1.00---------------------------
.......................................................................TGAGGGAGAAGTTTGAGGGT...............................................................................................................................................................201.000.00--------------------1.00-----------------------------
.......................................................................TGAGGGAGAAGTTTGAATA................................................................................................................................................................191.000.00-----------------------------1.00--------------------
.......................................................................TGAGGGAGAAGTTTGGAAA................................................................................................................................................................191.000.00-------------------------1.00------------------------
.......................................................................TGAGGGAGAAGTTTGTATG................................................................................................................................................................191.000.001.00-------------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTG..................................................................................................................................................................171.000.00-------------1.00------------------------------------
.......................................................................TGAGGGAGAAGTTTGAGCTGG..............................................................................................................................................................211.000.00------------1.00-------------------------------------
.......................................................................TGAGGGAGAAGTTTGAGCAGT..............................................................................................................................................................211.000.00---------------------1.00----------------------------
.......................................................................TGAGGGAGAAGTTTGACCAG...............................................................................................................................................................201.000.00---1.00----------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTAGA................................................................................................................................................................191.000.00---1.00----------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTT..................................................................................................................................................................171.000.00------1.00-------------------------------------------
..............................AACTGCTCTGCTACTTCTGGCT......................................................................................................................................................................................................221.000.00---------------------------------1.00----------------
...........................................................................................................................ACGAATGAGACTCCCGCA.............................................................................................................181.000.00------------------------------------------1.00-------
.......................................................................TGAGGGAGAAGTTTGAACCT...............................................................................................................................................................201.000.00---1.00----------------------------------------------
.......................................................................TGAGGGAGAAGTTTGTGT.................................................................................................................................................................181.000.00--1.00-----------------------------------------------
.......................................................................TGAGGGAGAAGTTTGCAC.................................................................................................................................................................181.000.00------------------------------1.00-------------------
...TGGCATCATGTGGCAGCTG....................................................................................................................................................................................................................................1921.001.00----------------------------------------------0.50-0.50-
.......................................................................TGAGGGAGAAGTTTGAGATGCT.............................................................................................................................................................221.000.00------------------1.00-------------------------------
.......................................................................TGAGGGAGAAGTTTGTAAG................................................................................................................................................................191.000.00----1.00---------------------------------------------
.......................................................................TGAGGGAGAAGTTTGATTAA...............................................................................................................................................................201.000.00----------------1.00---------------------------------
........................CCTCCCAACTGCTCTTCC................................................................................................................................................................................................................181.000.00------------------------------------1.00-------------
.............................................................................AGAAGTTTGAGATGCTGAA..........................................................................................................................................................191.000.00---------1.00----------------------------------------
.......................................................................TGAGGGAGAAGTTTGTGAG................................................................................................................................................................191.000.001.00-------------------------------------------------
.......................................................................TGAGGGAGAAGTTTGCTCA................................................................................................................................................................191.000.00----------1.00---------------------------------------
.......................................................................TGAGGGAGAAGTTTGAGCTTT..............................................................................................................................................................211.000.00-----------------------1.00--------------------------
.......................................................................TGAGGGAGAAGTTTGAGCT................................................................................................................................................................191.000.00--1.00-----------------------------------------------
...........................CCCAACTGCTCTGCTACTTC...........................................................................................................................................................................................................2020.500.50---------------------------------------------0.50----
...................CTGCTCCTCCCAACTGCTCT...................................................................................................................................................................................................................2020.500.50-----------------------------------------------0.50--
............................................................................................................................CGAATGAGACTCCCAC..............................................................................................................1620.500.50--------------------------------------------0.50-----
........................CCTCCCAACTGCTCTGCT................................................................................................................................................................................................................1830.330.33------------------------0.33-------------------------

Antisense strand
GTGTGGCATCATGTGGCAGCTGCTCCTCCCAACTGCTCTGCTACTTCTAGGTAAGTCAGGGTCTCCCTGGTTGAGGGAGAAGTTTGAGATGCCTTGGGTTCAGCAGAGACCCCTTTTCAGGCTACGAATGAGACTCCCACGAAGGGATGGGACCCCTCACCACATCTATAGCTGTGGATTGAGCTCCTAGGACAAGCCAAGATGGGGCTAGAAATGAGGAGAATGCTGGTTCCAATTGGGGCATACTCAT
..........................................................................(((((..(((((....((((.(((.((......)).))).....))))..)))))....)))))................................................................................................................
..................................................................67......................................................................139.............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577746(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577738(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189783SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		TAX577742(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................CCCATCCCTTCGTGGGAGTCT................................................................................................... 2111.001.00------------------------1.00-------------------------
..................................................................................................................................CCATCCCTTCGTGGGAGTCT.................................................................................................... 2011.001.00---------------------------1.00----------------------
..................................................................................................................................................................CTCAATCCACAGCTATAGATG................................................................... 2120.500.50-------------------------------------------------0.50