ID: uc001fyj.2_intron_11_0_chr1_161140740_f
GENE: PPOX(12)
chr1:161140690-161140873+


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(4)
BREAST 		(9)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
HELA 		(1)
LIVER 		(1)
OTHER 		(5)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TTCTCAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGGTAAGTTGGGAAAACAGCTGGGCTGAGGAGGGCCAAGGACATCAGACCCCCAGCTAAAACATTCCTTTCATCCTTTCCTTCCAGAGTCAGCTAGGCAATTCCTGACTGCTCACAGGTTGCCCCTGACTCTGGCT
.........................................................(((((...(((((((((((...............))))...)))))))......)))))....................................................................
.........................................................58..........................................................................134................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189784SRR037937(GSM510475)
293cand2. (cell line)		SRR189786RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR343334SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR038862(GSM458545)
MM472. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)
..............................................................AACAGCTGGGCTGAGAGGG.......................................................................................................1932.000.0028.004.00--------------------------------
..............................................................AACAGCTGGGCTGAGAGG........................................................................................................1829.000.0025.00--1.00---------1.00-1.001.00-----------------
..............................................................AACAGCTGGGCTGAGAG.........................................................................................................178.000.006.001.00--1.00-----------------------------
..............................................................AACAGCTGGGCTGAGAGC........................................................................................................187.000.006.00--1.00------------------------------
................................................................................................................TCCTTTCATCCTTTCCTTCCAG..................................................2215.005.00------------1.00----1.00---1.00---1.00-----1.00--
............................................................................................CAGACCCCCAGCTAAGGCC.........................................................................194.000.00--4.00-------------------------------
.....................................................................GGGCTGAGGAGGGCCAAGGACA.............................................................................................2213.003.00----3.00-----------------------------
..................................................GTAAGTTGGGAAAACAGCTGGGCTGAGGAGGGCCAAGGACATCAGACCCCCAGCTAAAACATTCCTTTCATCCTTTCCTTC.....................................................8113.003.00-----3.00----------------------------
........................................................................................................................................TCAGCTAGGCAATTCCCG..............................182.000.00--------1.00--------------1.00----------
..............................................................AACAGCTGGGCTGAGAGAG.......................................................................................................192.000.001.00-1.00-------------------------------
..............................................................AACAGCTGGGCTGAGCGCT.......................................................................................................191.000.00---1.00------------------------------
..............................................................AACAGCTGGGCTGAGAGCC.......................................................................................................191.000.001.00---------------------------------
..............................................................AACAGCTGGGCTGAGAGGC.......................................................................................................191.000.00---1.00------------------------------
..................................................GTAAGTTGGGAAAACAGCTGGGCTGAG...........................................................................................................2711.001.00-------1.00--------------------------
..............................................................AACAGCTGGGCTGAGTTT........................................................................................................181.000.00---------1.00------------------------
..............................................................AACAGCTGGGCTGAGCTTT.......................................................................................................191.000.00-1.00--------------------------------
..................................................................................................................................................................CAGGTTGCCCCTGACTCTGGCT2211.001.00-----------1.00----------------------
..............................................................AACAGCTGGGCTGAGAAGG.......................................................................................................191.000.00-1.00--------------------------------
..............................................................AACAGCTGGGCTGAGAGGA.......................................................................................................191.000.001.00---------------------------------
...TCAGAACTGCATTCCATAA..................................................................................................................................................................191.000.00-1.00--------------------------------
..............................................................AACAGCTGGGCTGAGCGC........................................................................................................181.000.001.00---------------------------------
..............................AGGTCACTGGCAAAAACTA.......................................................................................................................................1911.001.00----------------------------1.00-----
............................CTAGGTCACTGGCAAAAACTA.......................................................................................................................................2111.001.00-------1.00--------------------------
..............................................................AACAGCTGGGCTGAGAGCT.......................................................................................................191.000.001.00---------------------------------
...............................................................................................................TTCCTTTCATCCTTTCCTTCCAGG.................................................241.000.00------------------------1.00---------
...............................................................................................................TTCCTTTCATCCTTTCCTTCCAGA.................................................2411.001.00--------------1.00-------------------
................................................................................................................TCCTTTCATCCTTTCCTTCCAGA.................................................2311.001.00----------1.00-----------------------
...TCAGAACTGCATTCCCCCGGT................................................................................................................................................................211.000.00-----------------------------1.00----
..............................................................AACAGCTGGGCTGAGACCT.......................................................................................................191.000.00-1.00--------------------------------
...TCAGAACTGCATTCCCCAGGCTT..............................................................................................................................................................231.000.00---------------------------1.00------
..............................................................AACAGCTGGGCTGAGTGGG.......................................................................................................191.000.001.00---------------------------------
..............................................................AACAGCTGGGCTGAGGGG........................................................................................................1880.380.250.12--0.25------------------------------
....CAGAACTGCATTCCCC....................................................................................................................................................................1630.330.33--------------------------------0.33-
..............................................................AACAGCTGGGCTGAGG..........................................................................................................1680.250.250.25---------------------------------
..............................................................AACAGCTGGGCTGAGGGGTA......................................................................................................2080.120.250.12---------------------------------
..............................................................AACAGCTGGGCTGAGGGCGA......................................................................................................2080.120.25---0.12------------------------------

Antisense strand
TTCTCAGAACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGGTAAGTTGGGAAAACAGCTGGGCTGAGGAGGGCCAAGGACATCAGACCCCCAGCTAAAACATTCCTTTCATCCTTTCCTTCCAGAGTCAGCTAGGCAATTCCTGACTGCTCACAGGTTGCCCCTGACTCTGGCT
.........................................................(((((...(((((((((((...............))))...)))))))......)))))....................................................................
.........................................................58..........................................................................134................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189784SRR037937(GSM510475)
293cand2. (cell line)		SRR189786RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR343334SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR038862(GSM458545)
MM472. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)
.....AGAACTGCATTCCCCTAC................................................................................................................................................................. 182.000.00------2.00---------------------------
......................................................................................................................CTAGCTGACTCTGGAAGGAAAGGATG........................................ 2611.001.00------------------------------1.00---
...............................................................................................................TTCCTTTCATCCTTTCCAGA..................................................... 201.000.00--------------------------1.00-------
.................................................................................................................................AGCAGTCAGGAATTGCCTAGCTGACTCTGGA........................ 3111.001.00-------------------1.00--------------
.................................................................................................CCCCAGCTAAAACATTTTTT................................................................... 201.000.00--------------------1.00-------------
......................................................................................................GCTAAAACATTCCTTTCGGG.............................................................. 201.000.00------------------1.00---------------
...................................................................................................................GCTGACTCTGGAAGGAAAGGATGAAA........................................... 2611.001.00----------------------1.00-----------
.......................................................................................................................................................................AGCCAGAGTCAGGGGCA 1740.250.25---------------------------------0.25