ID: uc001fwu.2_intron_7_0_chr1_160793587_f
GENE: (8)
chr1:160793537-160794020+


(2)
B-CELL
(5)
BREAST
(5)
CELL-LINE
(4)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(9)
LIVER
(3)
OTHER
(9)
SKIN
(4)
UTERUS

Sense strand
AGTCTGTGGTTGGAGAGAACACCATGTATGCACAAGTGTTCAACTTACAGGTGAGCCCTTCTGATCAATACACCTTCCTCCTCCTCCCATGTCTAGCGGCATCTGAGATCCTGGATGACTAGTTCCTCCAAACTGGGGGCTGGGGCCTGGAAACAGGACTAGGGGCATACGGGCAGGGACTCATGGCTGTGTCCATGTTTACCAAACCTTGGGATCCTGTGGAACGAGGGACTTGTCCCTCAGCTCTCATTCTTGGGCCACTAATAAGGAAGGTGTTGGAGAACCAGAGGCACCGTCCCCACTGCACTAAGGCAGCTCCCACCCTGTGTGTGAGATGGGAAGCCAGGGGGTATCCCCTCTCCTCAAGGGTTGAGGGTAAAACTGAAAAGCTCTCATGTGGTCACTAGGGCTCATCTGCTGTTGGTGTGTTACAGGGAAAGACCCCAGTTTCTCAGAAGGAAGAGAGCTCAGCCACAATCTACTG
......................................................(((((.(((.(((........(((.....(((..(((((....)))))..))).....)))))).)))..(((((.....)))))..)))))..................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150............................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR040023(GSM532908)
G575T. (cervix)
SRR189784TAX577588(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................TCCCATGTCTAGCGGTTAG.............................................................................................................................................................................................................................................................................................................................................................................................19157.002.0016.0012.00---6.005.002.003.00--2.002.00--1.00-----1.00-1.00---1.00----1.00-1.001.001.001.00-----
....................................................................................TCCCATGTCTAGCGGTTA..............................................................................................................................................................................................................................................................................................................................................................................................18110.002.00-4.00---1.002.00---------------1.00-1.00----1.00-------------
....................................................................................TCCCATGTCTAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................1512.002.00--------------------1.00-----1.00----------------
.................................................................................................................................................................................................................................................................................................................................................................................TTGAGGGTAAAACTGGTGA................................................................................................191.000.00-------------1.00-----------------------------
......................................................................CACCTTCCTCCTCCTCTAG...........................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------1.00--------------------------------
....................................................................................................................................................GGAAACAGGACTAGGGGCATACGGGCAG....................................................................................................................................................................................................................................................................................................................2811.001.00----------------1.00--------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGGTGTGTTAAGG..................................................181.000.00-------------------1.00-----------------------
....................................................................................TCCCATGTCTAGCGGATA..............................................................................................................................................................................................................................................................................................................................................................................................1811.002.00-----1.00-------------------------------------
.GTCTGTGGTTGGAGAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------1.00---------------------------------
.............................................................................................TAGCGGCATCTGAGATCGGTT..................................................................................................................................................................................................................................................................................................................................................................................211.000.00-----------------1.00-------------------------
....TGTGGTTGGAGAGAACACTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00----------------1.00--------------------------
.......................................................................................................................................................................................................TACCAAACCTTGGGAAAA...........................................................................................................................................................................................................................................................................181.000.00---------------1.00---------------------------
..TCTGTGGTTGGAGAGAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------1.00---------
..................................................................................................................................................................................................................GGGATCCTGTGGAAC...................................................................................................................................................................................................................................................................1550.200.20-----------------------------------------0.20-
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGGGAAAGACC.........................................1570.140.14------------------------------------------0.14

Antisense strand
AGTCTGTGGTTGGAGAGAACACCATGTATGCACAAGTGTTCAACTTACAGGTGAGCCCTTCTGATCAATACACCTTCCTCCTCCTCCCATGTCTAGCGGCATCTGAGATCCTGGATGACTAGTTCCTCCAAACTGGGGGCTGGGGCCTGGAAACAGGACTAGGGGCATACGGGCAGGGACTCATGGCTGTGTCCATGTTTACCAAACCTTGGGATCCTGTGGAACGAGGGACTTGTCCCTCAGCTCTCATTCTTGGGCCACTAATAAGGAAGGTGTTGGAGAACCAGAGGCACCGTCCCCACTGCACTAAGGCAGCTCCCACCCTGTGTGTGAGATGGGAAGCCAGGGGGTATCCCCTCTCCTCAAGGGTTGAGGGTAAAACTGAAAAGCTCTCATGTGGTCACTAGGGCTCATCTGCTGTTGGTGTGTTACAGGGAAAGACCCCAGTTTCTCAGAAGGAAGAGAGCTCAGCCACAATCTACTG
......................................................(((((.(((.(((........(((.....(((..(((((....)))))..))).....)))))).)))..(((((.....)))))..)))))..................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150............................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR040023(GSM532908)
G575T. (cervix)
SRR189784TAX577588(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................TCAATACACCTTCCTCGA.................................................................................................................................................................................................................................................................................................................................................................................................................. 1810.000.00---10.00---------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCCCAGTTTCTCATG............................ 1910.000.00----10.00--------------------------------------
.....................................................................ACACCTTCCTCCTCCTGGAC........................................................................................................................................................................................................................................................................................................................................................................................................... 203.000.00---------2.00---1.00-----------------------------
...................................................................ATACACCTTCCTCCTCCAGGT............................................................................................................................................................................................................................................................................................................................................................................................................ 212.000.00--2.00----------------------------------------
.................................................................CAATACACCTTCCTCCTCCGTT............................................................................................................................................................................................................................................................................................................................................................................................................. 222.000.00--2.00----------------------------------------
.................................................................CAATACACCTTCCTCCTCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................. 212.000.00--2.00----------------------------------------
....................................................................TACACCTTCCTCCTCCTGTG............................................................................................................................................................................................................................................................................................................................................................................................................ 201.000.00---------------------------------------1.00---
...................................................................ATACACCTTCCTCCTCCAGT............................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00--1.00----------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGAGCTCAGCCAACG....... 181.000.00----------1.00--------------------------------
............................................TTACAGGTGAGCCCTTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00------------------1.00------------------------
...........................................................................TCCTCCTCCTCCCATGTCTGGAC.................................................................................................................................................................................................................................................................................................................................................................................................. 231.000.00--------------1.00----------------------------
............................................TTACAGGTGAGCCCTTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00------------------1.00------------------------
........................................................................................................................................................................................................................................................................................................................................................................................TAAAACTGAAAAGCTCTGGT........................................................................................ 201.000.00-------------------------------1.00-----------
..................................................................AATACACCTTCCTCCTCCAGTT............................................................................................................................................................................................................................................................................................................................................................................................................ 221.000.00--1.00----------------------------------------
......................................................................CACCTTCCTCCTCCTCCCAGT......................................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00--------------------------------------1.00----
..................................................................................................................................................................................................................GGGATCCTGTGGAACGGATC.............................................................................................................................................................................................................................................................. 201.000.00--1.00----------------------------------------
......................................................................................................................................................................................................................TCCTGTGGAACGAGGGAGTC.......................................................................................................................................................................................................................................................... 201.000.00-------1.00-----------------------------------
...........................................................................ATGGGAGGAGGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................... 1501.001.00-------------------------1.00-----------------
............................................................................................................................................................................................................................................CCCTCAGCTCTCATTGGGA..................................................................................................................................................................................................................................... 191.000.00--------------1.00----------------------------
..................................................................AATACACCTTCCTCCTCCATT............................................................................................................................................................................................................................................................................................................................................................................................................. 211.000.00--1.00----------------------------------------
.................................................................CAATACACCTTCCTCCTCCGAA............................................................................................................................................................................................................................................................................................................................................................................................................. 221.000.00--1.00----------------------------------------
......................................................................CACCTTCCTCCTCCTCCCATG......................................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00------------------------------1.00------------
..................................................GTGAGCCCTTCTGATCAT................................................................................................................................................................................................................................................................................................................................................................................................................................ 181.000.00-----------------1.00-------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGATTGTGGCTGAGCTCTC.. 2111.001.00----------------------------1.00--------------
...............................................................................................................................................................................CACAGCCATGAGTCCC..................................................................................................................................................................................................................................................................................................... 1640.250.25----------------------------------------0.25--