ID: uc001fwl.3_intron_4_0_chr1_160604688_r.3p
GENE: (2)
chr1:160604638-160604887-


(4)
B-CELL
(1)
BRAIN
(26)
BREAST
(18)
CELL-LINE
(14)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(3)
LIVER
(2)
OTHER
(17)
SKIN

Sense strand
ATTTTATCCCAAGGTGGTCTTAGATAGGATGTAGTGGGGCATGATGGACAGTGTGAAGCAATAGATTCCCCACTAGAAATAAATCACATTGAGGGGGAGGGAAAATGCCATTAGGCTGTACTTTGTTCTAACAAAAAGGTCAAGTGAGAATTCCCAGGGGTTCACTTCAGTGATGGCTCCCTTCCTCCCACTCCTGACAGAGCAGGTCTCCACTCCAGAAATTAAAGTTTTAAACAAGACCCAGGAGAAC
.........................................................................................((.((((((((((....(((((((((((....(((((....)))))..))))......((((((....)))))).......))))))))))))))))).))..((((......))))............................................
.............................................................................78..............................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR037938(GSM510476)
293Red. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR040041(GSM532926)
G612T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR189782SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
GSM532878(GSM532878)
G691T. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532929(GSM532929)
G702N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191525(GSM715635)
121genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191538(GSM715648)
49genomic small RNA (size selected RNA from t. (breast)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR029125(GSM416754)
U2OS. (cell line)
SRR343334SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................................CTCCCACTCCTGACACCA................................................18377.000.0075.0052.0042.0030.0026.0016.0014.0013.0012.0012.005.006.005.003.004.003.003.001.002.002.002.002.00-2.002.001.001.001.001.001.00---1.001.001.001.001.001.00-1.001.001.001.001.001.00-1.00-1.00-1.001.00-1.00--1.00-1.001.001.001.001.001.001.00-1.001.001.00---1.001.001.001.001.001.001.00-1.00--1.001.00-----
........................................................................................................................................................................................CTCCCACTCCTGACACCAT...............................................1914.000.002.001.002.00--2.001.001.00-1.001.00--1.00-----------------1.00--------------------------1.00--------------------------------
........................................................................................................................................................................................CTCCCACTCCTGACACCAA...............................................194.000.00------2.001.00---------1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................TCCCACTCCTGACAGCA................................................172.000.00-------------------------------------------------------1.00---------------------------1.00-------
......................................................................................................................................................................................TCCTCCCACTCCTGACACCA................................................202.000.001.00---------------------------------------------1.00--------------------------------------------
........................................................................................................................................................................................CTCCCACTCCTGACAACA................................................182.000.00-----------------1.00--------------------------------------------------------------------1.00----
........................................................................................................................................................................................CTCCCACTCCTGACACCG................................................181.000.00--------------------------------------------------------1.00----------------------------------
..................................................................................ATCACATTGAGGGGGATTTC....................................................................................................................................................201.000.00-----------------------------------------------------1.00-------------------------------------
.........................................................................................................................................................................................TCCCACTCCTGACAGAGCAGAAA..........................................231.000.00---------------------------------------1.00---------------------------------------------------
........................................ATGATGGACAGTGTGAAGCAATAGA.........................................................................................................................................................................................2511.001.00------------------------------------------------1.00------------------------------------------
........................................................................................................................................................................................CTCCCACTCCTGACATTA................................................181.000.001.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTCCCACTCCTGACACCAC...............................................191.000.001.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTCCCACTCCTGACACGA................................................181.000.00--------1.00----------------------------------------------------------------------------------
..................................................................................ATCACATTGAGGGGGTTTT.....................................................................................................................................................191.000.00----------------------------------------------------------------------1.00--------------------
.........................................................................................................................................................................................TCCCACTCCTGACAGCTTG..............................................191.000.00--------------------------------1.00----------------------------------------------------------
..................................................................................ATCACATTGAGGGGGATT......................................................................................................................................................181.000.00----------------------------------------------------------------------------------1.00--------
........................................................................................................................................................................................CTCCCACTCCTGACAGCA................................................181.000.001.00------------------------------------------------------------------------------------------
...................TTAGATAGGATGTAGTGGGGCATG...............................................................................................................................................................................................................2411.001.00------------------------------------------------------------------------1.00------------------
.......................................................................................................................................................................................CCTCCCACTCCTGACACCA................................................1981.000.120.12-0.12-------0.12-------0.25------0.120.12---------------------------------------------------------------0.12
.........................................TGATGGACAGTGTGAAGTCTG............................................................................................................................................................................................211.000.00--------------------------------------------------1.00----------------------------------------
..............................................................................................................TTAGGCTGTACTTTGTACAG........................................................................................................................201.000.00----------------------1.00--------------------------------------------------------------------
................................................CAGTGTGAAGCAATATG.........................................................................................................................................................................................171.000.00------------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................TCCCACTCCTGACAGTAAT..............................................191.000.00-----------------------------------------------------------------------1.00-------------------
..............................................................................................................TTAGGCTGTACTTTGTTCTG........................................................................................................................201.000.00----------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................................TCCCACTCCTGACAGA.................................................1640.250.25----------------------------------------------------------------------------------------0.25--
.......................................................................................................................................................................................CCTCCCACTCCTGACA...................................................1680.120.12-----------0.12-------------------------------------------------------------------------------
.........................AGGATGTAGTGGGGC..................................................................................................................................................................................................................1580.120.12-----------------------------------------------------------------------------------------0.12-

Antisense strand
ATTTTATCCCAAGGTGGTCTTAGATAGGATGTAGTGGGGCATGATGGACAGTGTGAAGCAATAGATTCCCCACTAGAAATAAATCACATTGAGGGGGAGGGAAAATGCCATTAGGCTGTACTTTGTTCTAACAAAAAGGTCAAGTGAGAATTCCCAGGGGTTCACTTCAGTGATGGCTCCCTTCCTCCCACTCCTGACAGAGCAGGTCTCCACTCCAGAAATTAAAGTTTTAAACAAGACCCAGGAGAAC
.........................................................................................((.((((((((((....(((((((((((....(((((....)))))..))))......((((((....)))))).......))))))))))))))))).))..((((......))))............................................
.............................................................................78..............................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR037938(GSM510476)
293Red. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR040041(GSM532926)
G612T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR189782SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
GSM532878(GSM532878)
G691T. (cervix)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532929(GSM532929)
G702N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191525(GSM715635)
121genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191538(GSM715648)
49genomic small RNA (size selected RNA from t. (breast)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR029125(GSM416754)
U2OS. (cell line)
SRR343334SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................ATAAATCACATTGAGCACT......................................................................................................................................................... 191.000.00------------------------------------------------------------------1.00------------------------
...........................................................................................................................................................................................................AGGTCTCCACTCCAGCTG............................. 181.000.00--------------------------------------------------------------------------------1.00----------
................................................................ATTTCTAGTGGGGAAT.......................................................................................................................................................................... 1620.500.50---------------------------------------------------------------------------------------0.50---