ID: uc001fpr.2
GENE: CRABP2(1)
chr1:156670795-156671044-


(2)
AGO2.ip 		(3)
BRAIN 		(18)
BREAST 		(16)
CELL-LINE 		(10)
CERVIX 		(1)
HEART 		(2)
HELA 		(6)
LIVER 		(6)
OTHER 		(2)
RRP40.ip 		(27)
SKIN 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
CCCCTCATCTTTCAGGGCTGCACCGCCTACCGTCTCCTTCAAGGCACTTTCTTAGACACCCAGGCACCAGGCAGATGCACCCCCCAACACACCCACCCCAAGCAAGTCACAAATCAGCCTGCTCCAACTGTCTTATGGGGAGGGTGTGAGAGAGGTGCCCAAAGGCCCCTAAAAGGTGAGCCTCTCCTCTCTCCCCACAGGGGTGAATGTGATGCTGAGGAAGATTGCTGTGGCTGCAGCGTCCAAGCCA
.......................................................................................................................................(((((((((.....((((((((((....))).((.....))...)))))))..))))))))).....................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189782TAX577579(Rovira)
total RNA. (breast)		SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040041(GSM532926)
G612T. (cervix)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
.........................................................................................................................................................................................................................AGGAAGATTGCTGTGGCTGCAG...........22111.0011.00-10.00------1.00------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTG.............................................................................................22111.0011.001.00-1.004.001.00--1.00----------2.00--------------------1.00-----------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTG.............................................................................................2319.009.003.00--1.00-1.00-----------------2.00-------2.00-------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGT..............................................................................................2118.008.00-2.00---1.00-----1.00-------1.00-1.001.00-------------------------1.00--------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGC............................................................................................2318.008.00-1.001.00----3.00-------1.00----------1.00-----------------------------1.00------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGT............................................................................................2317.0011.001.00-1.002.001.00------------1.00---------------------------1.00-----------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGG...............................................................................................2117.007.004.001.00-1.00-----------1.00-----------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGA............................................................................................2316.0011.003.001.00------------------1.00---------1.00--------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAG................................................................................................2016.006.001.00-3.00-------------1.00------------------------------------------------1.00---------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTG.............................................................................................2416.006.00----------3.00-3.00--------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGT..............................................................................................2316.006.002.001.00---1.00--------------------1.00-------------------------1.00----------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGG...............................................................................................2016.006.002.00----------2.00----------------------------------------------------1.00----------------1.00-----------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGG...............................................................................................2215.005.003.00----------1.00-----------------------------------------------------------------1.00---------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAG..................................................................................................1915.005.00-1.002.002.00-----------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAA................................................................................................2014.002.00--2.00--1.00--------------------------------1.00------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGC............................................................................................2414.004.00----1.00---------1.00---------------1.00--1.00-----------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCACA...................................................2314.004.00-----------------1.00-1.00------------------------------1.00---------------1.00--------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCAC....................................................2213.003.00--------------------------------------------1.00------1.00-------------------------------1.00---------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGT..............................................................................................2213.003.00---2.00---------1.00-------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGCGC............................................................................................2413.007.00------2.00-------1.00------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGCG.............................................................................................2413.005.00------3.00--------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGT............................................................................................2413.009.001.00--------------------------1.00------------------1.00----------------------------------------------
..........................................................................................................................................................................................................................GGAAGATTGCTGTGGCTGCAG...........2113.003.00-3.00-------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGA.................................................................................................2013.003.001.00---1.00-----------1.00----------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAG................................................................................................1912.002.001.00---------------------1.00----------------------------------------------------------------------
............................................................................................................ACAAATCAGCCTGCTGTA............................................................................................................................182.000.00---------2.00-----------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGAT...........................................................................................2612.006.00----2.00----------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGA.................................................................................................1912.002.00-1.001.00------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTAA............................................................................................2512.006.00-------------1.00--------------1.00----------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGT............................................................................................2512.006.001.00---1.00----------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGA.................................................................................................1812.002.002.00--------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTAT............................................................................................2412.003.00------------------------2.00--------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGCCCAAAGGCCCCTAAAAGGTGAGCCTCTCCTCTCTCCCC......................................................6312.002.00-----------------------------2.00---------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGT.................................................................................................192.000.00-----------------------------------1.00------1.00--------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAA............................1812.002.00-----------------------------------------------1.00------------------------------1.00--------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGA............................................................................................2412.009.00---1.00-1.00---------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAG................................................................................................2112.002.00----1.00----1.00-----------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTA.............................................................................................2412.006.002.00--------------------------------------------------------------------------------------------
............................................................................................................................................AGGGTGTGAGAGAGGTAC............................................................................................181.000.00----------------------------------------------------------------------------------1.00----------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGG..............................................................................................2311.005.00-----1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TGAATGTGATGCTGAGGAAGATTG.......................2411.001.00----------------------------------------1.00----------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAAGATTG.......................2311.001.00-------------------------------------------------------------------------------------1.00-------
.......................................................ACACCCAGGCACCAGGCAGAGGCG...........................................................................................................................................................................241.000.00-------------------------1.00-------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGGC...........................................................................................2511.009.00-------------------------------------------------------------------------1.00-------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGCGCC...........................................................................................2611.005.00------1.00--------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGCC...........................................................................................2511.001.00--1.00------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGAT...........................................................................................2411.0011.00-----1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AGGAAGATTGCTGTGGCTGC.............2011.001.00-1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................GTGAGCCTCTCCTCTCTCCCCAG....................................................231.000.00----1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGATTGCTGTGGCTGCA............3311.001.00-1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGCTGAGGAAGATTGCTGTGGCTG..............2411.001.00---------------------------1.00-----------------------------------------------------------------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTGTGGCTGCAGCGTT.......291.000.00----------------------------------------------------------------------1.00----------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGCAA..........................................................................................2611.004.00-----------------------------------------------------------1.00---------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTAG............................................................................................2511.006.001.00--------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAAGA..........................2011.001.00-1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGCCC..........................................................................................2511.001.00--------------1.00------------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTGCCGA.........................................................................................261.000.00--1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAAGATTGCTGTGGCTGC.............1911.001.00-1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAAGATTGCTGTGGCTGCAGCGT........2411.001.00--------------------1.00------------------------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCACCA..................................................2411.003.001.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCA.....................................................2111.001.00------------------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................GGGTGAATGTGATGCTGAGGAAGATTGC......................2811.001.00-1.00-------------------------------------------------------------------------------------------
....................................................................................................................GCCTGCTCCAACTGTCGGG...................................................................................................................191.000.00-------------------------------------------------------------------------------1.00-------------
..........................................................................................................TCACAAATCAGCCTGATCT.............................................................................................................................191.000.00---------------------------------------------------------------------------1.00-----------------
.............................................................AGGCACCAGGCAGATGCACAGTT......................................................................................................................................................................231.000.00-------------------------1.00-------------------------------------------------------------------
................................................................................................................................................................................TGAGCCTCTCCTCTCTCCCCACT...................................................2311.003.00------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................GTGAATGTGATGCTGAGGAAGATTGCTGTGG.................3111.001.00--------------------------------------------------------------------------1.00------------------
..........................................................................................................................................................................................................GTGAATGTGATGCTGAGGAAGATTGC......................2611.001.00-1.00-------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGA...............................................................................................2211.002.001.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGATTGCTGTGGCTGCAC...........201.000.00--------1.00------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGCCC..........................................................................................2711.001.00--------------------------------------------------------------------1.00------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTT.............................................................................................2211.008.00-------------------------------------1.00-------------------------------------------------------
..................................................................................................................................................................................................................GATGCTGAGGAAGATTGC......................1811.001.00-----------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................................................................GGTGAATGTGATGCTGAGGAAGATT........................2511.001.00-1.00-------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTA.............................................................................................2311.003.00-------------1.00-------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGCG.............................................................................................2311.007.00------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GATGCTGAGGAAGATTGCTGTGGC................2411.001.00----------------------------------------------------------1.00----------------------------------
........................................................................................................................................................................................................................GAGGAAGATTGCTGTGGCTGCAG...........2311.001.00-----1.00---------------------------------------------------------------------------------------
...........................................................................................................................................GAGGGTGTGAGAGAGAGAC............................................................................................191.000.00-----------------------------------------1.00---------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAAA.................................................................................................191.000.00----------------------------1.00----------------------------------------------------------------
............................................................................................................ACAAATCAGCCTGCTGTAG...........................................................................................................................191.000.00---------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGA..............................................................................................2311.005.001.00--------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAAA...............................................................................................2111.002.00---------------------------------------------------------------------1.00-----------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGGG.............................................................................................2311.007.00------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGTGATA..........................................................................................2711.006.001.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TGTGATGCTGAGGAAGA..........................1711.001.00-------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGAA.............................................................................................2211.006.00--1.00------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGATTGCTGTGGCTGCAG...........2011.001.00--------1.00------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTATT...........................................................................................2511.003.00-1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGATTG.......................2211.001.00-------------------------------------------------------------------1.00-------------------------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTGTGGCTGCAG...........2511.001.00---------------------------------------------------------1.00-----------------------------------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTGTGGCTGGAG...........251.000.00----------------1.00----------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTAG............................................................................................2411.003.00--1.00------------------------------------------------------------------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGTGTTT..........................................................................................2611.009.00-------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGA..........................1911.001.00-------------------------------------------------------------1.00-------------------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGA...............................................................................................2111.006.00-----1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TGAATGTGATGCTGAGGA.............................1811.001.00---------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGAGAGGCGC............................................................................................2511.005.00------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGA.............................1711.001.00-------------------------------------------------------1.00-------------------------------------
.............................................................................................................................................................................................................AATGTGATGCTGAGGAAGATTGCTGTGGCTGC.............3211.001.00---------------1.00-----------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGA...............................................................................................2011.002.001.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ATGTGATGCTGAGGAAGATTG.......................2111.001.00--------------------------------------------------------------------------------1.00------------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAGGTTT............................................................................................2311.008.00-------------------------------------------1.00-------------------------------------------------
..............................................................................ACCCCCCAACACACCAAG..........................................................................................................................................................181.000.00------------------------------------------------------------------------1.00--------------------
......................................................................................................................................ATGGGGAGGGTGTGAGAGAGGA..............................................................................................2211.007.00----------1.00----------------------------------------------------------------------------------
................................................................................CCCCCAACACACCCATT.........................................................................................................................................................171.000.00------------------------------------------------------1.00--------------------------------------
.........................................................................................................................................................................................................................AGGAAGATTGCTGTGGCTGCAGCGT........2511.001.00-------1.00-------------------------------------------------------------------------------------
............................................................................................................................................................................................................GAATGTGATGCTGAGGAAGATTGCTGTGGCTGCAG...........3511.001.00-1.00-------------------------------------------------------------------------------------------
.....................................................................................................................................TATGGGGAGGGTGTGAGA...................................................................................................1811.001.00----------------------------------1.00----------------------------------------------------------
............................................................................................................................................................................................................................AAGATTGCTGTGGCTGCGCAA.........211.000.00----------------------------------------------------------------------------1.00----------------
......................................................................................................................................................................................TCTCCTCTCTCCCCACAGGGGTA.............................................231.000.00------------------------------------------------------------------------------------1.00--------
.......................................................................................................................................TGGGGAGGGTGTGAGAGAA................................................................................................1911.002.001.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGATTGCTGTGGCTG..............1730.670.67--------0.33---------------------------------------------------------------------------------0.33--
.................................................................................................................................................................................................................TGATGCTGAGGAAGATTG.......................1820.500.50--------0.50------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTGAGGAAGATTGCTG....................1620.500.50--------0.50------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................CTGTGGCTGCAGCGTCC......1720.500.50---------------------------------------------------------------------------------------0.50-----
.....................................................................................................................................TATGGGGAGGGTGTGAG....................................................................................................1740.250.25--------------------------------------------------------------------------------------------0.25
.......................................................................................................................................................................................................................TGAGGAAGATTGCTG....................1560.170.17-----------------0.17---------------------------------------------------------------------------
.......................................................................................................................................TGGGGAGGGTGTGAGA...................................................................................................1690.110.110.11--------------------------------------------------------------------------------------------

Antisense strand
CCCCTCATCTTTCAGGGCTGCACCGCCTACCGTCTCCTTCAAGGCACTTTCTTAGACACCCAGGCACCAGGCAGATGCACCCCCCAACACACCCACCCCAAGCAAGTCACAAATCAGCCTGCTCCAACTGTCTTATGGGGAGGGTGTGAGAGAGGTGCCCAAAGGCCCCTAAAAGGTGAGCCTCTCCTCTCTCCCCACAGGGGTGAATGTGATGCTGAGGAAGATTGCTGTGGCTGCAGCGTCCAAGCCA
.......................................................................................................................................(((((((((.....((((((((((....))).((.....))...)))))))..))))))))).....................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189782TAX577579(Rovira)
total RNA. (breast)		SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040041(GSM532926)
G612T. (cervix)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
.........................................................................................................................................................................................................................................CTGCAGCGTCCAAGCAAT 181.000.00---1.00-----------------------------------------------------------------------------------------
.....................................................................................AACACACCCACCCCATAT................................................................................................................................................... 181.000.00-----------------------------------------------------------------------1.00---------------------
.....................................................................................AACACACCCACCCCATGT................................................................................................................................................... 181.000.00---------------------------------------------------------------1.00-----------------------------
..................................................................................CCCAACACACCCACCCCATGGG.................................................................................................................................................. 220.500.00--------------------------------0.50------------------------------------------------------------
..................................................................................CCCAACACACCCACCCCATA.................................................................................................................................................... 200.500.00--------------------------------------------------------------------------------------0.50------
..................................................................................CCCAACACACCCACCCCATGTG.................................................................................................................................................. 220.500.00--------------------------------0.50------------------------------------------------------------
..................................................................................CCCAACACACCCACCCCATTGG.................................................................................................................................................. 220.500.00--------------------------------------------------------------0.50------------------------------
..................................................................................CCCAACACACCCACCCCATGAA.................................................................................................................................................. 220.500.00----------------------------------------------------------------------------------------0.50----
..................................................................................TGGGGTGGGTGTGTTGGG...................................................................................................................................................... 1820.500.50--------------------------------------------------------------0.50------------------------------
..................................................................................CCCAACACACCCACCCCAAAAG.................................................................................................................................................. 220.500.00--------------------------------0.50------------------------------------------------------------
...........................................................................................................................................................................................................................................TGGCTTGGACGCTGC 1530.330.33-----------------------------------------------------------------------------------------0.33---
...................................................................................TGGGGTGGGTGTGTTGG...................................................................................................................................................... 1740.250.25-------------------------------------------------------------------------------------------0.25-