ID: uc001fou.1_intron_4_0_chr1_156386657_r.3p
GENE: C1orf61(2)
chr1:156386607-156386856-


(1)
B-CELL 		(9)
BRAIN 		(4)
CELL-LINE 		(1)
LIVER 		(2)
OTHER

Sense strand
ACAAATCTCTGAGCCTCAATTCAGATATTTGTATAATCAGGATAAGAAACCCTTAGGATTATTGTGTGCAGAAAATGAAGAATTCTATATAAAAGATCGTATACTATGTTATGACACTCATGGTTAAACGGTAATTCTTAGATTGCAGAAAGGTTAAAGGCTACAGTTTGGAAAGACTGATAGCATATGATTTGTTTCAGAATGTAAAAAGGGCAGCTCTCTGGCATGTTCCTGACTGAGGATCTCATAA
..................................................................(((((......(((((((...........(((((..((((((..........))))))...))))))))))))...)))))(((((((((...((((((((((....)))))).))))...)))))..))))....................................................
..............................................................63.......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR343334SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
............................................................................................................................................................................AAGACTGATAGCATATGATTTGTTT.....................................................2514.004.004.00-------------------
...................................................................GCAGAAAATGAAGAATTCTATA.................................................................................................................................................................2213.003.003.00-------------------
.......................................................................................................................................................................TTGGAAAGACTGATAGCATA...............................................................2012.002.001.001.00------------------
...................................................................GCAGAAAATGAAGAATTCT....................................................................................................................................................................1912.002.001.00-1.00-----------------
..........................................................................................................................................TAGATTGCAGAAAGGTT...............................................................................................1712.002.00-2.00------------------
...........................................................................................................................................................................AAAGACTGATAGCATATGATTTGTTT.....................................................2612.002.001.00---1.00---------------
........................................................................................................................................CTTAGATTGCAGAAAGGT................................................................................................1812.002.001.00-1.00-----------------
............................................................................................................................................................................AAGACTGATAGCATATGATTTGTTTC....................................................2612.002.002.00-------------------
............................................................................................................................................................................AAGACTGATAGCATATGATTTGTT......................................................2412.002.00-1.00--1.00---------------
............................................................................................................................................................................AAGACTGATAGCATATGATTTGTTTCA...................................................2712.002.001.00-1.00-----------------
..........................................................................................................................................................................GAAAGACTGATAGCATATGATTT.........................................................2311.001.00--1.00-----------------
............................................................................................................................................................................................................................CTGGCATGTTCCTGACTGAGG.........2111.001.00-----1.00--------------
.....................................................TAGGATTATTGTGTGCAGAAAATGAAGA.........................................................................................................................................................................2811.001.00-----1.00--------------
.....................................................................................................................................................................GTTTGGAAAGACTGATAGCATATG.............................................................2411.001.00-1.00------------------
....................................................TTAGGATTATTGTGTGCAG...................................................................................................................................................................................1911.001.00-1.00------------------
.................................................................................................................................................................................................................AGGGCAGCTCTCTGGCATGTTC...................2211.001.001.00-------------------
.............................................................................................................................................................................................................................TGGCATGTTCCTGACTGAGG.........2011.001.00---1.00----------------
.............................................................................................................................................................................................................AAAAAGGGCAGCTCTCTGGCA........................2111.001.00-----1.00--------------
.........................................................................................................................................TTAGATTGCAGAAAGGTTA..............................................................................................1911.001.00---------------1.00----
.............................................................TTGTGTGCAGAAAATGAAGAATTC.....................................................................................................................................................................2411.001.00----1.00---------------
.............................................................................................................................................................................AGACTGATAGCATATGAT...........................................................1811.001.00------1.00-------------
............................................................ATTGTGTGCAGAAAATGAAGAATTCT....................................................................................................................................................................2611.001.00----1.00---------------
.....................................................................................TATATAAAAGATCGTAT....................................................................................................................................................1711.001.00----1.00---------------
......................................................................................................................................TTCTTAGATTGCAGAAAGGT................................................................................................2011.001.00--1.00-----------------
...................................................................................................................................TAATTCTTAGATTGCAGAAAGGTTA..............................................................................................2511.001.00------1.00-------------
............................................................................................................................................................................AAGACTGATAGCATATGATTTG........................................................2211.001.001.00-------------------
....................................................TTAGGATTATTGTGTGCAGAAAATGAAG..........................................................................................................................................................................2811.001.00----1.00---------------
...................................................CTTAGGATTATTGTGTGCAGAA.................................................................................................................................................................................2211.001.00-1.00------------------
......................................................................................................................................TTCTTAGATTGCAGAAAGGTT...............................................................................................2111.001.00--------------1.00-----
........................................................................................ATAAAAGATCGTATACTATGTTA...........................................................................................................................................2311.001.00-1.00------------------
...........................................................................................................................................................................AAAGACTGATAGCATATGATTTGT.......................................................2411.001.00----1.00---------------
...............................................................................................................................................................................................................AAAGGGCAGCTCTCTGGCA........................1911.001.00---1.00----------------
...................................................CTTAGGATTATTGTGTGCAGAAAAT..............................................................................................................................................................................2511.001.00-1.00------------------
.............................................................................................................................................................................................................AAAAAGGGCAGCTCTCTGGCATG......................2311.001.00---1.00----------------
..................................................CCTTAGGATTATTGTGTGCAG...................................................................................................................................................................................2111.001.00-1.00------------------
..............................................................................................................................................................................................................................GGCATGTTCCTGACTGAGGATCTCA...2511.001.00-1.00------------------
...................................................CTTAGGATTATTGTGTGCAG...................................................................................................................................................................................2011.001.001.00-------------------
......................................................AGGATTATTGTGTGCAGAAAATGAAGAA........................................................................................................................................................................2811.001.00---1.00----------------
...........................................................................................................................................................................AAAGACTGATAGCATATGATTTG........................................................2311.001.001.00-------------------
........................................................................................................................................CTTAGATTGCAGAAAGGTTA..............................................................................................2011.001.001.00-------------------
.................................................................................................................................................................................................................AGGGCAGCTCTCTGGCATGTT....................2111.001.00-----1.00--------------
......................................................................................................................................................................................................................AGCTCTCTGGCATGTTCCTGACT.............2311.001.00---1.00----------------
...................................................................GCAGAAAATGAAGAATCTG....................................................................................................................................................................191.000.00-------1.00------------
..............................................................................................................................................................................................................................GGCATGTTCCTGACTGAGGATCTC....2411.001.00-1.00------------------
...........................................................................................................................................................................AAAGACTGATAGCATATGATTTGTTTC....................................................2711.001.00----1.00---------------
..............................................................TGTGTGCAGAAAATGAAGAATTC.....................................................................................................................................................................2311.001.00-1.00------------------
.........................................................................................................................................TTAGATTGCAGAAAGGTTAAAGG..........................................................................................2311.001.00--1.00-----------------
..................................................................TGCAGAAAATGAAGAATTCTATA.................................................................................................................................................................2311.001.00--1.00-----------------
.....................................................................................................................................................................................................CAGAATGTAAAAAGGGCAGCTCTC.............................2411.001.00-1.00------------------
................................................................................................................................................................................................................AAGGGCAGCTCTCTGGCATGTTCCTGA...............2711.001.001.00-------------------
...................................................................GCAGAAAATGAAGAATTCTATAT................................................................................................................................................................2311.001.00-1.00------------------
............................................................................................................................................................................AAGACTGATAGCATATGATTTGT.......................................................2311.001.00-1.00------------------
.......................................................................................................................................TCTTAGATTGCAGAAAGGT................................................................................................1911.001.00--1.00-----------------
....................................................TTAGGATTATTGTGTGCAGAAAATG.............................................................................................................................................................................2511.001.00--1.00-----------------
.........................................................................................................................................................................GGAAAGACTGATAGCATAT..............................................................1911.001.00-------1.00------------
......................................................................................................................................................................................................AGAATGTAAAAAGGGCAGCTCTCTGGCA........................2811.001.00---1.00----------------
...................................................................GCAGAAAATGAAGAATCTGA...................................................................................................................................................................201.000.00------------1.00-------
..........................................................................................................................................................................................................TGTAAAAAGGGCAGCTCTCTGG..........................2211.001.00---1.00----------------
...............................................................................................................................ACGGTAATTCTTAGATTGCAG......................................................................................................2111.001.00---1.00----------------
....................................................................................................................................................................AGTTTGGAAAGACTGATAGCATAT..............................................................2411.001.00-----------------1.00--
.....................................................................................................................................................................GTTTGGAAAGACTGATAGCATA...............................................................2211.001.00-1.00------------------
...................................................................................................................................TAATTCTTAGATTGCAGGGAC..................................................................................................211.000.00-----------1.00--------
.....................................................................................................................................................................................................................................TCCTGACTGAGGATC......1550.400.40-------------------0.40

Antisense strand
ACAAATCTCTGAGCCTCAATTCAGATATTTGTATAATCAGGATAAGAAACCCTTAGGATTATTGTGTGCAGAAAATGAAGAATTCTATATAAAAGATCGTATACTATGTTATGACACTCATGGTTAAACGGTAATTCTTAGATTGCAGAAAGGTTAAAGGCTACAGTTTGGAAAGACTGATAGCATATGATTTGTTTCAGAATGTAAAAAGGGCAGCTCTCTGGCATGTTCCTGACTGAGGATCTCATAA
..................................................................(((((......(((((((...........(((((..((((((..........))))))...))))))))))))...)))))(((((((((...((((((((((....)))))).))))...)))))..))))....................................................
..............................................................63.......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR343334SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
...............................................................................................................TGACACTCATGGTTAAAAG........................................................................................................................ 192.000.00---------1.00------1.00---
..................................................................................................................................................................................................................................TGTTCCTGACTGAGGGTG...... 182.000.00--------2.00-----------
......................................................................................ATATAAAAGATCGTATATT................................................................................................................................................. 191.000.00----------1.00---------
............................................................................................................................................GATTGCAGAAAGGTTAAAC........................................................................................... 191.000.00------------------1.00-
............................................................................................................................................................................................................................CTGGCATGTTCCTGACTCTTC......... 211.000.00-------------1.00------