ID: uc001flq.2_intron_3_0_chr1_155691410_f.3p
GENE: (4)
chr1:155694973-155695222+


(1)
AGO2.ip
(1)
B-CELL
(2)
BREAST
(4)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(1)
HELA
(6)
LIVER
(1)
OTHER
(2)
SKIN

Sense strand
CGGAATAATGTATTTCAGTTTTTAGCTAAGTTATATGGATAGATTTTCAAACTCAGTACCAACCCAGCTTCTCCTAACTGAGTAAATTAGAGGCATGCAATCTGATGGTCTTGGTTGCCACTTTAGGCAGAGTATATATACCACCCCCCACCCACTCCTTCCACACCCACCCACTCTTTCCTTCTTTCCTACTTTATCAGGTGAAGACATTCAGTGAAGCTTGCCTGATGGTAAGGAAACCAGCCCTAGA

.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................................................................................................................TCTTTCCTACTTTATGGA..................................................18143.000.00143.00--------------------
.........................................GATTTTCAAACTCAGGGA...............................................................................................................................................................................................181.000.00-----1.00---------------
............................................................................................................................................................................................................AGACATTCAGTGAAGCTTGCC.........................2111.001.00----1.00----------------
...........................................................................................................................................................................CACTCTTTCCTTCTTTTAAT...........................................................201.000.00------------------1.00--
......................................................................................................................................................................................................AGGTGAAGACATTCAGTGAAGCTTGCC.........................2711.001.00-1.00-------------------
..................................................................................................................................................CCCACCCACTCCTTCCACACCCCG................................................................................241.000.00-------1.00-------------
............................................................................................................................................................................................................AGACATTCAGTGAAGCTTGC..........................2011.001.00------1.00--------------
..................................................................................................................................................................................................................................GATGGTAAGGAAACCAGCCCTAGA2411.001.00--------------1.00------
........................................................................................................................................................................................................................................AAGGAAACCAGCCCTAGA1811.001.00-1.00-------------------
......................................................................................................................................................................................................................TGAAGCTTGCCTGATGGTA.................1911.001.00----------1.00----------
.........................................................................................GAGGCATGCAATCTGATGGT.............................................................................................................................................2011.001.00---1.00-----------------
.....................................................................................................................................................ACCCACTCCTTCCACCTAC..................................................................................191.000.00--1.00------------------
..................................................ACTCAGTACCAACCCAGCTTC...................................................................................................................................................................................2111.001.00----------------1.00----
.....................................................................................................................................................................................................................GTGAAGCTTGCCTGATGG...................1811.001.00-----------1.00---------
.....................................................................................................................................................................................TTCTTTCCTACTTTATCAG..................................................1921.001.00------------1.00--------
...............................................................................GAGTAAATTAGAGGCATGCAATCTGA.................................................................................................................................................2611.001.00-------------1.00-------
.....................................................................................................................................................................................TTCTTTCCTACTTTATC....................................................1720.500.50--------------------0.50

Antisense strand
CGGAATAATGTATTTCAGTTTTTAGCTAAGTTATATGGATAGATTTTCAAACTCAGTACCAACCCAGCTTCTCCTAACTGAGTAAATTAGAGGCATGCAATCTGATGGTCTTGGTTGCCACTTTAGGCAGAGTATATATACCACCCCCCACCCACTCCTTCCACACCCACCCACTCTTTCCTTCTTTCCTACTTTATCAGGTGAAGACATTCAGTGAAGCTTGCCTGATGGTAAGGAAACCAGCCCTAGA

.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.................................................................................................................................................................CACACCCACCCACTCTGGT...................................................................... 191.000.00-----------------1.00---
.............................................................................................................................................CACCCCCCACCCACTCCTGGG........................................................................................ 211.000.00---------1.00-----------
.......................................................................................................................................................................................................................................TAAGGAAACCAGCCCGTTC 191.000.00---------------1.00-----
............................................................................................................................................................CCTTCCACACCCACCCAGTG.......................................................................... 201.000.00-------------------1.00-
...............................................................................................................................................CCCCCCACCCACTCCTTGG........................................................................................ 191.000.00--------1.00------------
.......................................................................................................................................................CCACTCCTTCCACACCAGGA............................................................................... 201.000.00-1.00-------------------