ID: uc001fge.4
GENE: FLAD1(5)
chr1:154962684-154962864+


(2)
AGO2.ip 		(11)
B-CELL 		(1)
BRAIN 		(10)
BREAST 		(34)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(6)
HELA 		(4)
LIVER 		(2)
OTHER 		(18)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
ATCTCCCCTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATCAAGAGGTACTAGGGGCCTGGAGGTTTGGGCTCCAAGAGAAGCTTGACAGAGCCCACGCCCGACCCCTACTTCTGTTTCTTCCTAAGGTATAATCTGCAGATGTTGGAAGCTGAGGGCAGCATGAAGCAGGCCCTGG
......................................................((((((..((..(((.(((((((((((.....))))...))))))).))))).))))))....................................................................
..................................................51.................................................................118.............................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343335DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR343334SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR189785DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR343337SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................CAGGACACTATCAAGAG...................................................................................................................................17130.0030.00-12.00-----2.00--1.00-2.00------1.002.002.00----2.00----1.00-------------------1.00---1.00--1.00----1.00--------------1.00------------------
...................................................TACTAGGGGCCTGGAGGTTTGG............................................................................................................22124.0024.001.00--2.00-1.00-1.004.005.00--1.00--1.00-----1.00--1.00---1.00----------------2.00-------------------1.00--------------1.00-----1.00----------
................................ACAGGACACTATCAAGAG...................................................................................................................................18115.0015.005.00-------1.00----------------------1.00----2.00----1.002.001.00------------------------1.00------------------1.00---------
...................................................TACTAGGGGCCTGGAGGTTTGGGCT.........................................................................................................25110.0010.00--3.00---1.00-----1.002.00--------------1.00--------1.00---------1.00-------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGC..........................................................................................................2419.009.002.00--1.00-1.00---1.001.00-1.00------1.00------------------------------------------------------------------------1.00----
..................................................GTACTAGGGGCCTGGAGGTTTGGGCTCCAAGAGAAGCTTGACAGAGCCCACGCCCGACCCCTACTTCTGTTTCTTCCTAAG..................................................8119.009.00----8.00-------------------------------------------1.00------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGG...........................................................................................................2317.007.00---1.00-1.00--1.00-1.00--------1.00--------------------1.00-----------------------------1.00--------------------------
....................................................ACTAGGGGCCTGGAGGTTTGGGCTTT.......................................................................................................2615.002.00------5.00------------------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGG............................................................................................................2315.005.00---1.00---1.00--1.00-----------------------------1.00------------------------------------------------------1.00-
..............................CTACAGGACACTATCAAG.....................................................................................................................................1814.004.00-----------3.00----------------------------------1.00--------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGA...........................................................................................................2314.0024.00------------1.00---1.00------------2.00-------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGT...........................................................................................................2314.0024.00----------------------1.00-----------2.00--1.00-----------------------------------------------------------
............................TTCTACAGGACACTATCAAG.....................................................................................................................................2014.004.00-----------3.00--1.00----------------------------------------------------------------------------------
..............................................................................................................................................AGATGTTGGAAGCTGAGGGCAGCATGAAGCA........3113.003.00-----3.00-------------------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGC..........................................................................................................2513.003.00---1.00---1.00-----------1.00-----------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGCTT........................................................................................................2613.0010.00-------1.00---------------2.00-------------------------------------------------------------------------
..............................................................................................................................................AGATGTTGGAAGCTGAGGGCAT.................2213.001.002.00-------------------------------------------------------1.00----------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGA............................................................................................................2213.002.00--------1.00---------------1.00----------------1.00-------------------------------------------------------
..............................................................................................AGCCCACGCCCGACCCCTACT..................................................................2113.003.00-----------------------------------2.00----------------------------------------------1.00--------------
..................................................GTACTAGGGGCCTGGAGGTTTGGG...........................................................................................................2413.003.00-------1.00--2.00--------------------------------------------------------------------------------------
.............................................................................CAAGAGAAGCTTGACAGA......................................................................................1813.003.00---1.00------------------------------------------------1.00------1.00-------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGCTCCAAGAGAAGCTTGACAGAGCCCACGCCCGACCCCTACTTCTGTTTCTTCCTAAGT.................................................8213.009.00-------------------------3.00-----------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGCTCT.......................................................................................................2812.001.00-----------------1.00--------------------1.00----------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGCT.........................................................................................................2612.002.00---------------1.00-----------------------------------------------------------------1.00---------------
..............................................................................................AGCCCACGCCCGACCCCTAAA..................................................................212.000.00----------------1.00-------------------------------------1.00------------------------------------------
....................................................ACTAGGGGCCTGGAGGTTTGGGCT.........................................................................................................2412.002.00------2.00------------------------------------------------------------------------------------------
.TCTCCCCTTTCCCTGAGCCAG...............................................................................................................................................................212.000.00------------------1.00----------------------------------1.00-------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGCTCCAAGAGAAGCTTGACAGAGCCCACGCCCGACCCCTACTTCTGTTTCTTCCTAA...................................................8012.002.00----2.00--------------------------------------------------------------------------------------------
....................................................ACTAGGGGCCTGGAGGTTTGGAA..........................................................................................................2312.001.002.00------------------------------------------------------------------------------------------------
....................................................ACTAGGGGCCTGGAGGTTTGGG...........................................................................................................2212.002.00-------1.00-----------------------------------------------------------------------1.00-----------------
..................................................................................................................................GGTATAATCTGCAGATGTTGGAAG...........................2412.002.00---------------------------2.00---------------------------------------------------------------------
............................................................................................................CCCTACTTCTGTTTCTTCCTAAG..................................................2312.002.00--------------------------------------------2.00----------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTG.............................................................................................................2112.002.00---------1.00-------1.00-------------------------------------------------------------------------------
.......................ACAGTTTCTACAGGACACTATCA.......................................................................................................................................2312.002.00-----------1.00--1.00----------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTCGGG...........................................................................................................242.000.00--2.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................GGAAGCTGAGGGCAGCATGAAGCAGG......2612.002.00-----2.00-------------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAGCTGAGGGCACTT...............181.000.00-----------------------------------------------1.00-------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGAT...........................................................................................................2311.002.00--------1.00----------------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGCTCAAA.....................................................................................................3011.001.00-------------1.00-----------------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGCCC........................................................................................................2611.009.00--1.00----------------------------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGCTA........................................................................................................2611.0010.00---1.00---------------------------------------------------------------------------------------------
..................CTGGAACAGTTTCTATCTG................................................................................................................................................191.000.00-----------------1.00-------------------------------------------------------------------------------
....................................................ACTAGGGGCCTGGAGGTTTGG............................................................................................................2111.001.00-------------------------------------------------------------------1.00-----------------------------
..............................................................................................AGCCCACGCCCGACCCCTATA..................................................................211.000.00----------------1.00--------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTA...............................................................................................................201.000.00--------------------------------1.00----------------------------------------------------------------
...............................TACAGGACACTATCAAGAG...................................................................................................................................1911.001.00-------------------------------------------------1.00-----------------------------------------------
...........................................................................................................................................TGCAGATGTTGGAAGCTGAGGGCAGCATGA............3011.001.00------------------------------1.00------------------------------------------------------------------
.............................................................................CAAGAGAAGCTTGACAGC......................................................................................181.000.00---------------1.00---------------------------------------------------------------------------------
...........................TTTCTACAGGACACTACAAG......................................................................................................................................201.000.00--------------1.00----------------------------------------------------------------------------------
...........................................................................TCCAAGAGAAGCTTGAACAG......................................................................................201.000.00----------------------------------------------------------------------------------------------1.00--
.....................................................CTAGGGGCCTGGAGGTTTGGGCT.........................................................................................................2311.001.00------1.00------------------------------------------------------------------------------------------
......................................................TAGGGGCCTGGAGGTTTGGGCTAAA......................................................................................................251.000.00----------------------1.00--------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGTA.........................................................................................................2511.007.00-----------------------------------------------------------------------------------------1.00-------
......................................................................................................................................TAATCTGCAGATGTTGGAAGCTGA.......................2411.001.00-----------------------------------------------------------------------------------1.00-------------
......................................................TAGGGGCCTGGAGGTTTGGGCTC........................................................................................................2311.001.00-------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................AGGTATAATCTGCAGATG..................................1811.001.00---------------------------------1.00---------------------------------------------------------------
.................................................................AGGTTTGGGCTCCAAGAGAAG...............................................................................................2111.001.00---------------1.00---------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGT............................................................................................................2311.001.00----------------------------------------------------------------1.00--------------------------------
.............................................................................................................CCTACTTCTGTTTCTTCCTAAG..................................................2211.001.00---------------------------------------------------------------------------1.00---------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGT...........................................................................................................2411.005.00----------------------------1.00--------------------------------------------------------------------
...........................TTTCTACAGGACACTATCA.......................................................................................................................................1911.001.00--------------1.00----------------------------------------------------------------------------------
......................................................................................................................................TAATCTGCAGATGTTGGAAGCTGAG......................2511.001.00---------------------------------------1.00---------------------------------------------------------
.................................................................AGGTTTGGGCTCCAAGAGA.................................................................................................1911.001.00-------------------------------------------------------------1.00-----------------------------------
.........................................................................................................................................TCTGCAGATGTTGGAAGCTGAGGGCAGC................2811.001.00--------------------------1.00----------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGCTC........................................................................................................2611.001.00--1.00----------------------------------------------------------------------------------------------
.................................................................................................................................................TGTTGGAAGCTGAGGGCAGCAT..............2211.001.00------------------------1.00------------------------------------------------------------------------
.........................................................................................................................................TCTGCAGATGTTGGAAGCTGAGGGCA..................2611.001.00---------------------------------------1.00---------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGCTCT.......................................................................................................2711.001.00--1.00----------------------------------------------------------------------------------------------
..........................................................................................................ACCCCTACTTCTGTTTCTTCCTAAG..................................................2511.001.00--------------------1.00----------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGTA..........................................................................................................2511.005.00---------------------------------------------------------------------1.00---------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGAAC..........................................................................................................2511.001.00---1.00---------------------------------------------------------------------------------------------
....................................................................................................................................TATAATCTGCAGATGTTGGAAGCTGAGGGC...................3011.001.00------------------------------------------------------------1.00------------------------------------
..........................................................................................................................................CTGCAGATGTTGGAAATA.........................181.000.00-----------------------------------------------------------------------1.00-------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGAAAA........................................................................................................2611.0024.001.00------------------------------------------------------------------------------------------------
.....................................................................................................................................ATAATCTGCAGATGTTGGAAGCTGAG......................2611.001.00----------------------------------------------------------------------------------------1.00--------
.......................ACAGTTTCTACAGGACAC............................................................................................................................................1811.001.00--------------------------------------------------1.00----------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGCTC........................................................................................................2711.001.00-----------------1.00-------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGCTCCT......................................................................................................291.000.00--1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................CAGATGTTGGAAGCTGAGGGCAGC................2411.001.00--------------------------------------1.00----------------------------------------------------------
....................................................ACTAGGGGCCTGGAGGTTTGGGCTCTTT.....................................................................................................281.000.00--1.00----------------------------------------------------------------------------------------------
.........................AGTTTCTACAGGACACTATCAAGAG...................................................................................................................................2511.001.00---------------------------------------------------------1.00---------------------------------------
.................................CAGGACACTATCAAGAGAA.................................................................................................................................1911.0030.00------------------------------------------------------------------------1.00------------------------
..............................................................................AAGAGAAGCTTGACAGA......................................................................................1721.001.00-----------------------------------------------------------------------------1.00-------------------
......................................................TAGGGGCCTGGAGGTTTGGGCTCT.......................................................................................................2411.001.00-------------1.00-----------------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGCTGA.......................................................................................................2711.0010.00---1.00---------------------------------------------------------------------------------------------
...........................TTTCTACAGGACACTATCAAG.....................................................................................................................................2111.001.00----------------------------------------------1.00--------------------------------------------------
..............................................................................................................................................AGATGTTGGAAGCTGAGGGCAGCATGAAGCAGGC.....3411.001.00-----1.00-------------------------------------------------------------------------------------------
..............................................................................................AGCCCACGCCCGACCCCTACTT.................................................................2211.001.00----------------1.00--------------------------------------------------------------------------------
.................................................................AGGTTTGGGCTCCAAGAGAA................................................................................................2011.001.00-----------------------1.00-------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTT..............................................................................................................2011.001.00---------------------------1.00---------------------------------------------------------------------
....................................................................TTTGGGCTCCAAGAGAAG...............................................................................................1811.001.00--------------------------------------------------------------------------1.00----------------------
.................................................................................................................................AGGTATAATCTGCAGATA..................................181.000.00---------------------------------1.00---------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGTAT.........................................................................................................2511.0024.00----------------------1.00--------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTCGGG...........................................................................................................231.000.00--1.00----------------------------------------------------------------------------------------------
.......................................................AGGGGCCTGGAGGTTTGG............................................................................................................1811.001.00-------------------------------------------------------------------------------------------1.00-----
................................................................................................................................................ATGTTGGAAGCTGAGGGCA..................1911.001.001.00------------------------------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTTGGGT..........................................................................................................2411.007.00------------------------------------------------------------------------------------1.00------------
..................................................GTACTAGGGGCCTGGAGGTTTGGGTAT........................................................................................................2711.003.00----------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................TGCAGATGTTGGAAGCTGAGGGC...................2311.001.00-------------------------------------------------------------------------------------1.00-----------
..................................................GTACTAGGGGCCTGGAGGTTTG.............................................................................................................2211.001.00--------------------------------1.00----------------------------------------------------------------
......................................................................................CTTGACAGAGCCCACGCCCGACCCCTACTCCTG..............................................................331.000.00-------------------------------------------------------------------------1.00-----------------------
..................................AGGACACTATCAAGAG...................................................................................................................................1601.001.00----------1.00--------------------------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGGTTCG.............................................................................................................211.000.00--------------------------------------------------------------1.00----------------------------------
.................................CAGGACACTATCAAGAGGTACTA.............................................................................................................................2311.001.00---------------------------------------------------------------------------------------------1.00---
..............................................................................................................................................AGATGTTGGAAGCTGAGGGCA..................2111.001.00------------------------------------------------------------------------------------------1.00------
.................................................................................................................................................TGTTGGAAGCTGAGGGCA..................1820.500.50-----------------------------0.50-------------------------------------------------------------------
...................................................TACTAGGGGCCTGGAGG.................................................................................................................1730.330.33---------0.33---------------------------------------------------------------------------------------
..................................................GTACTAGGGGCCTGGAG..................................................................................................................1730.330.33-----0.33-------------------------------------------------------------------------------------------
..............................................................TGGAGGTTTGGGCTC........................................................................................................1580.120.12------------------------------0.12------------------------------------------------------------------

Antisense strand
ATCTCCCCTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATCAAGAGGTACTAGGGGCCTGGAGGTTTGGGCTCCAAGAGAAGCTTGACAGAGCCCACGCCCGACCCCTACTTCTGTTTCTTCCTAAGGTATAATCTGCAGATGTTGGAAGCTGAGGGCAGCATGAAGCAGGCCCTGG
......................................................((((((..((..(((.(((((((((((.....))))...))))))).))))).))))))....................................................................
..................................................51.................................................................118.............................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343335DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR343334SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR189785DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR343337SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................ACGCCCGACCCCTACTCGA............................................................... 193.000.00------------------3.00------------------------------------------------------------------------------
................................................................................................AGGGGTCGGGCGTGGG..................................................................... 1611.001.00------------------------------1.00------------------------------------------------------------------
......................CCTCTTGATAGTGTCCTGTAGAAACTGTT.................................................................................................................................. 2911.001.00------------------------------------------------------------------1.00------------------------------
...................................GGACACTATCAAGAGGTACA.............................................................................................................................. 201.000.00-------------------------------------------1.00-----------------------------------------------------
..........................................................................................CGGGCGTGGGCTCTGT........................................................................... 1620.500.50------------------------------------------------------------------------------------------------0.50