ID: uc001fcz.2_intron_5_0_chr1_153751030_f
GENE: (6)
chr1:153750980-153751212+


(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(1)
B-CELL 		(3)
BRAIN 		(4)
BREAST 		(12)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(3)
HELA 		(4)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(24)
SKIN

Sense strand
AGGAGAGCCAATTCGGGACCCCCAGGGGCACTGTATGGCCACATCTCCAGGTTGGTGGTGTTCTGGTGGGGTGGGCGGGGTGCTGAAGCTGGCACAGGAGGACTGGAATTGGAGACTGGGGTGGATGGGGGCAGAAGGCTCTGGGAAAGGTGACACCACTCCTGACCCTGGTGACTCTGCCAGGTGAGCCAGGGCTGCTGGTGGCCCCGGTAAGCCAGCAGTCCCCATTCCTG
......................................................................................................((((....((((((..((((.....(((((.....))))).(((..((.....))..)))..))))..))..)))).))))..................................................
................................................................................................97....................................................................................183................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
..................................................................................................................................................................TGACCCTGGTGACTCTGCCAGT.................................................22123.001.009.00--1.00-2.00--1.00--2.00--1.001.00----1.001.00----1.00----------1.00---1.00-1.00------------
..................................................................................................................................................................TGACCCTGGTGACTCTGCCAGA.................................................22110.001.00---2.00-------------------1.00-1.00-1.00--1.00--1.00-1.00------1.00---1.00---------
.....................................................................................................ACTGGAATTGGAGACAG...................................................................................................................175.000.00-5.00------------------------------------------------------
.....................................................................................................ACTGGAATTGGAGACAGAA.................................................................................................................193.000.00-----------------------------1.00---------1.00-------1.00--------
.....................................................................................................................................................................................AGGTGAGCCAGGGCTGCTGGTGGC............................2412.002.00------2.00-------------------------------------------------
...................................................................................................................................................................GACCCTGGTGACTCTGCCAGT.................................................212.000.00-------------------------------------------------1.00-1.00----
.....................................................................................................ACTGGAATTGGAGACAGA..................................................................................................................182.000.00----1.00-----1.00---------------------------------------------
................................................................GGTGGGGTGGGCGGGGGA.......................................................................................................................................................182.000.00------------2.00-------------------------------------------
.....................................................................................................ACTGGAATTGGAGACTGAAGG...............................................................................................................212.000.00----1.00---------------------------------------------1.00-----
...........TTCGGGACCCCCAGGGGCACT.........................................................................................................................................................................................................2112.002.00-------1.00----------------------------------------1.00-------
.............................................................................................................................TGGGGGCAGAAGGCTCTGG.........................................................................................1911.001.00----------------------1.00---------------------------------
.......................................................................................................................................................GACACCACTCCTGACGCAG...............................................................191.000.00--1.00-----------------------------------------------------
..................................................................TGGGGTGGGCGGGGTCT......................................................................................................................................................171.000.00----------------------------1.00---------------------------
...........TTCGGGACCCCCAGGGGCACTGT.......................................................................................................................................................................................................2311.001.00-------1.00------------------------------------------------
................................................................................................................................GGGCAGAAGGCTCTGGGAAAG....................................................................................2111.001.00---------1.00----------------------------------------------
..............................................................................................................................GGGGGCAGAAGGCTCTGGGAAAGGTT.................................................................................261.000.00---------1.00----------------------------------------------
............................................................................................CACAGGAGGACTGGAATTGGAGA......................................................................................................................2311.001.00--------------------------------------1.00-----------------
....................................................................GGGTGGGCGGGGTGCTGAAGCTGGCACAGGA......................................................................................................................................3111.001.00-----------------------------------------------------1.00--
...............................................................................................................................GGGGCAGAAGGCTCTGGGAAAGGTG.................................................................................2511.001.00-------------1.00------------------------------------------
.....................................................................................................ACTGGAATTGGAGACTATC.................................................................................................................191.000.00--1.00-----------------------------------------------------
........................................................................................................................GTGGATGGGGGCAGAAGGCTCTGG.........................................................................................2411.001.00------------------1.00-------------------------------------
................................................AGGTTGGTGGTGTTCCTA.......................................................................................................................................................................181.000.00----------1.00---------------------------------------------
..........ATTCGGGACCCCCAGGGGCACT.........................................................................................................................................................................................................2211.001.00-------------1.00------------------------------------------
.............................................................................................................................TGGGGGCAGAAGGCTCTGGGA.......................................................................................2111.001.00----1.00---------------------------------------------------
........................................................................................................................................................................................TGAGCCAGGGCTGCTGG................................1711.001.00----------------------------------1.00---------------------
......................................................................................................CTGGAATTGGAGACTGGGGT...............................................................................................................2011.001.00-----------------1.00--------------------------------------
...................................................................................................................................................................GACCCTGGTGACTCTGCCAGA.................................................211.000.00------------------------1.00-------------------------------
.....................................................................................AAGCTGGCACAGGAGGACTGGAACTGG.........................................................................................................................271.000.00----------------------------------------1.00---------------
..................................................................................................................................................................TGACCCTGGTGACTCTGCCAG..................................................2111.001.00----------------------------------------------------1.00---
..............................................................................................................................................................................................AGGGCTGCTGGTGGCCGAC........................191.000.00------------------------------------------------------1.00-
...................................................................................................................................CAGAAGGCTCTGGGAAAGGTGACACCACTCCTG.....................................................................3311.001.00---1.00----------------------------------------------------

Antisense strand
AGGAGAGCCAATTCGGGACCCCCAGGGGCACTGTATGGCCACATCTCCAGGTTGGTGGTGTTCTGGTGGGGTGGGCGGGGTGCTGAAGCTGGCACAGGAGGACTGGAATTGGAGACTGGGGTGGATGGGGGCAGAAGGCTCTGGGAAAGGTGACACCACTCCTGACCCTGGTGACTCTGCCAGGTGAGCCAGGGCTGCTGGTGGCCCCGGTAAGCCAGCAGTCCCCATTCCTG
......................................................................................................((((....((((((..((((.....(((((.....))))).(((..((.....))..)))..))))..))..)))).))))..................................................
................................................................................................97....................................................................................183................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
......................................................................................................CCCATCCACCCCAGTCTCCAATTCCAG........................................................................................................ 2713.003.00--------1.00-------1.00--------------1.00------------------------
..GGTCCCGAATTGGCTCTC..................................................................................................................................................................................................................... 1811.001.00--------------------------------1.00-----------------------
..GGGTCCCGAATTGGCTCTC.................................................................................................................................................................................................................... 1911.001.00---------------------------------------------1.00----------
.....................................................................................................................GGGGTGGATGGGGGCCAAT................................................................................................. 191.000.00--------------------------------------------1.00-----------
......................................................................GTGGGCGGGGTGCTGGGCT................................................................................................................................................ 191.000.00--1.00-----------------------------------------------------
......................................................................GTGGGCGGGGTGCTGATTC................................................................................................................................................ 191.000.00--1.00-----------------------------------------------------
......................................................................................................CACCCCAGTCTCCAATTCCAG.............................................................................................................. 2111.001.00-------------------1.00------------------------------------
.....................................................................................................................................................................................................................AATGGGGACTGCTGGC.... 1650.200.20-------------------------------------------------------0.20