ID: uc001eyl.2_intron_0_0_chr1_151512903_f.3p
GENE: (1)
chr1:151534367-151534616+


(1)
AGO1.ip OTHER.mut
(1)
B-CELL
(5)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(1)
LIVER
(4)
OTHER
(8)
SKIN
(1)
UTERUS

Sense strand
GGTCCCAGAGTCACCACCCCAAACACCTGATCTTGGGCAAGGTAATGCTGCCTCCCTGGACTTCAGTTTTCCTAGTCTGTGAAGTGGTGATGATAAGACCCGCTCCACAGAGCTGGCAGAAGCACCCCTGTACTGGTAGCAGTTTGTACCTGTAGACTGTAAAGTTGAGGGGTTATTGTTGCTGTCATTGTCATTATTAGGGCAGCGTGGACATTCTCAGGCTGACTCTCCAGGGTGAACTGACAGGAGA
......................................................................................................................................(((((((((....((((...((((....))))...)))).)))))))))...................................................................
.................................................................................................................................130...................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189787SRR189782SRR189784SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................................................................GGTAGCAGTTTGTACAGTT.................................................................................................1927.000.0017.004.00-3.00-2.00-------1.00----------
......................................................................................................................................GGTAGCAGTTTGTACAG...................................................................................................175.000.00--4.00-----------1.00---------
.................................................................................................................................................................................GTTGCTGTCATTGTCGCTG......................................................193.000.00----3.00-------------------
......................................................................................................................................GGTAGCAGTTTGTACAGT..................................................................................................183.000.00-1.00-------------1.00-----1.00--
...................................................................................GTGGTGATGATAAGATGGG....................................................................................................................................................192.000.00---------1.00-------1.00------
.....................................................................................................................................TGGTAGCAGTTTGTACAGTT.................................................................................................202.000.001.001.00----------------------
...................................................................................................................................ACTGGTAGCAGTTTGTACAGGT.................................................................................................221.000.00-1.00----------------------
....................................................................................................................................................CCTGTAGACTGTAAAGGCTT..................................................................................201.000.00------------1.00-----------
.................................................................................................................................................GTACCTGTAGACTGTAAAGTTGAGGGG..............................................................................2711.001.00-------1.00----------------
...............................................................................................................................................................................................CATTATTAGGGCAGCGTGGA.......................................2011.001.00--------1.00---------------
...................................................................................................................................................ACCTGTAGACTGTAAAA......................................................................................171.000.00------1.00-----------------
............................................................................................................................................................................................................GCGTGGACATTCTCAGGC............................1811.001.00----------1.00-------------
............................................................................................................................................................CTGTAAAGTTGAGGGGTTAT..........................................................................2011.001.00-----------1.00------------
...................................................................................................................................ACTGGTAGCAGTTTGTACAGT..................................................................................................211.000.00-1.00----------------------
.......................................................................................................................................GTAGCAGTTTGTACCGTT.................................................................................................181.000.00------------------1.00-----
..............................................................................................................AGCTGGCAGAAGCACCAAA.........................................................................................................................191.000.00----------------1.00-------
.......................................................................................................................................................GTAGACTGTAAAGTTGAGGGG..............................................................................2111.001.00----------------------1.00-
..............................................................................................................................................TTTGTACCTGTAGACTGT..........................................................................................1811.001.00--------------------1.00---
..............................................................................................................................................................................................................GTGGACATTCTCAGGCTGACTC......................2211.001.00-------------------1.00----
......................................................................................................................................GGTAGCAGTTTGTACAGTC.................................................................................................191.000.001.00-----------------------

Antisense strand
GGTCCCAGAGTCACCACCCCAAACACCTGATCTTGGGCAAGGTAATGCTGCCTCCCTGGACTTCAGTTTTCCTAGTCTGTGAAGTGGTGATGATAAGACCCGCTCCACAGAGCTGGCAGAAGCACCCCTGTACTGGTAGCAGTTTGTACCTGTAGACTGTAAAGTTGAGGGGTTATTGTTGCTGTCATTGTCATTATTAGGGCAGCGTGGACATTCTCAGGCTGACTCTCCAGGGTGAACTGACAGGAGA
......................................................................................................................................(((((((((....((((...((((....))))...)))).)))))))))...................................................................
.................................................................................................................................130...................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189787SRR189782SRR189784SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................................................................CTGTAGACTGTAAAGTCTT.................................................................................. 191.000.00--1.00---------------------
...................................................................................................................................................................GTTGAGGGGTTATTGTCTG.................................................................... 191.000.00---1.00--------------------
................................TTGGGCAAGGTAATGCAC........................................................................................................................................................................................................ 181.000.00-----------------------1.00