ID: uc001exr.2_intron_4_0_chr1_151274444_r
GENE: (7)
chr1:151274394-151274719-


(1)
AGO2.ip
(2)
B-CELL
(3)
BRAIN
(1)
BREAST
(6)
CELL-LINE
(1)
CERVIX
(8)
HEART
(1)
KIDNEY
(1)
LIVER
(2)
OTHER
(22)
SKIN
(1)
TESTES

Sense strand
GAAGATCCTTCTGCAGTTGCTCTCAAAGAGCCCTGGCAGGAGAAAGTACGGTGAGTTGGGTGTGGGTCTCTGAACCCCTCTCAAAGCTCAGAGGCAGTTGTAAGTGCTCACTGCACCAACTTTATTGTCCATCAGCCTCCAAAAAAATCTGTCAGGCTTCCAGGCTGTCTGGGTCCTTGCCCTATGGGGCGTTTGCTTGGGATTTTTTGTGGAAGCCATGTCTCTTGTCCTCACCCTGGCATCAACCTTTGACACCCTTTACTTCTGTCTTCACAGGCGGATCAGAGAGGGCTCCCCCTACGGCCATCTCCCCAATTGGCGGCTCC
...................................................(((((((((...((((......))))..))))..)))))((((((((((...((((.....))))))))).............)))))...........................................................................................................................................................................................
..................................................51.................................................................................................150..............................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
............................................................TGTGGGTCTCTGAACTCTG.......................................................................................................................................................................................................................................................19112.000.0039.0027.009.008.006.004.00--2.001.001.001.00-2.002.001.001.00-----1.00-1.001.00-----1.00---1.00--1.00----1.001.00---
........................AAAGAGCCCTGGCAGGAGAAAGT.......................................................................................................................................................................................................................................................................................2312.002.00-----------------------1.00----------------1.00-------
...........................................................GTGTGGGTCTCTGAACTCTG.......................................................................................................................................................................................................................................................202.000.00--1.00------------1.00--------------------------------
........................AAAGAGCCCTGGCAGGAGAAAGTACGGCGGA...............................................................................................................................................................................................................................................................................311.000.00------------1.00-----------------------------------
.......................CAAAGAGCCCTGGCAGGAGAAAGTAC.....................................................................................................................................................................................................................................................................................2611.001.00------------------------------------------1.00-----
...........................................................................................................................................................................................................................................................................................................ACGGCCATCTCCCCAATTGGC......2111.001.00------------------------------1.00-----------------
......................TCAAAGAGCCCTGGCAGGAGAAAGTACGG...................................................................................................................................................................................................................................................................................2911.001.00------1.00-----------------------------------------
.................................................................................................................................................................................................................................................................................CAGGCGGATCAGAGAGGG...................................1811.001.00-----------------1.00------------------------------
...........................................................................................................................................................................................................................................................ACACCCTTTACTTCTGCAT........................................................191.000.00-----------------------------1.00------------------
...................................................................................................................................................................................................................................................................................................CTCCCCCTACGGCCACTT.................181.000.00-------------------------------------1.00----------
........................................................TGGGTGTGGGTCTCTGAACTCTG.......................................................................................................................................................................................................................................................231.000.00--------1.00---------------------------------------
......................TCAAAGAGCCCTGGCAGGAGAA..........................................................................................................................................................................................................................................................................................2211.001.00------------------------------------1.00-----------
.........................AAGAGCCCTGGCAGGAGAAAGTACG....................................................................................................................................................................................................................................................................................2511.001.00---------1.00--------------------------------------
....................TCTCAAAGAGCCCTGGCAGGAGA...........................................................................................................................................................................................................................................................................................2311.001.00-----------------------------------------------1.00
...................................................TGAGTTGGGTGTGGGTA..................................................................................................................................................................................................................................................................171.000.00-----------------------------------------1.00------
.......................CAAAGAGCCCTGGCAGGAGAAAGTACGG...................................................................................................................................................................................................................................................................................2811.001.00------1.00-----------------------------------------
.......................CAAAGAGCCCTGGCAGGAGAAAGTACGGTG.................................................................................................................................................................................................................................................................................3011.001.00------------1.00-----------------------------------
.....................CTCAAAGAGCCCTGGCAGGAGAAAGTACG....................................................................................................................................................................................................................................................................................2911.001.00----------------1.00-------------------------------
.....................CTCAAAGAGCCCTGGCAGGAGAAAGTACGG...................................................................................................................................................................................................................................................................................3011.001.00------1.00-----------------------------------------
...................................................................................................................................................................................................................................................................................GGCGGATCAGAGAGGGCT.................................1811.001.00----------------------------1.00-------------------
.......................CAAAGAGCCCTGGCAGGAGAAAGTACG....................................................................................................................................................................................................................................................................................2711.001.00---------------------------1.00--------------------
..............................................................................................................................................................................................................................................................................................GAGGGCTCCCCCTACGAG......................181.000.00--------------------------1.00---------------------
.....................................................................................................................................................................................................................................................................................CGGATCAGAGAGGGCTCCCCCTA..........................2311.001.00---------------------1.00--------------------------
....................TCTCAAAGAGCCCTGGCAGGAGAAA.........................................................................................................................................................................................................................................................................................2511.001.00-------------------1.00----------------------------
....................................................................................................................................................................................................................................................................................GCGGATCAGAGAGGGCTCCCC.............................2111.001.00-1.00----------------------------------------------
.................................TGGCAGGAGAAAGTACG....................................................................................................................................................................................................................................................................................1720.500.50------------------0.50-----------------------------
.......CTTCTGCAGTTGCTCT...............................................................................................................................................................................................................................................................................................................1640.250.25---------0.25--------------------------------------

Antisense strand
GAAGATCCTTCTGCAGTTGCTCTCAAAGAGCCCTGGCAGGAGAAAGTACGGTGAGTTGGGTGTGGGTCTCTGAACCCCTCTCAAAGCTCAGAGGCAGTTGTAAGTGCTCACTGCACCAACTTTATTGTCCATCAGCCTCCAAAAAAATCTGTCAGGCTTCCAGGCTGTCTGGGTCCTTGCCCTATGGGGCGTTTGCTTGGGATTTTTTGTGGAAGCCATGTCTCTTGTCCTCACCCTGGCATCAACCTTTGACACCCTTTACTTCTGTCTTCACAGGCGGATCAGAGAGGGCTCCCCCTACGGCCATCTCCCCAATTGGCGGCTCC
...................................................(((((((((...((((......))))..))))..)))))((((((((((...((((.....))))))))).............)))))...........................................................................................................................................................................................
..................................................51.................................................................................................150..............................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.AAGATCCTTCTGCAGTA.................................................................................................................................................................................................................................................................................................................... 175.000.00-----------1.00--------1.00------------1.001.00----------1.00--
........................................................................................................................................CTCCAAAAAAATCTGTAGG........................................................................................................................................................................... 191.000.00-------1.00----------------------------------------
..................................................................................................................................ATCAGCCTCCAAAAATGT.................................................................................................................................................................................. 181.000.00------------------1.00-----------------------------
............................................................................................................................................AAAAAAATCTGTCAGGCTTTC..................................................................................................................................................................... 211.000.00-------1.00----------------------------------------
......................................................................................................................................GCCTCCAAAAAAATCTG............................................................................................................................................................................... 171.000.00-------1.00----------------------------------------
............................................................................................................................................................................................................................................................CTGTGAAGACAGAAGTAAAGGGTG.................................................. 2411.001.00----------------------------------------------1.00-
.............................................................................................................................TGTCCATCAGCCTCCACA....................................................................................................................................................................................... 181.000.00---1.00--------------------------------------------
...............................................................................................................................................................................................................AGAGACATGGCTTCCACA..................................................................................................... 1811.001.00---------------------------------------1.00--------
.................................................................................................................................................................................................TGCTTGGGATTTTTTTATA.................................................................................................................. 191.000.00--------------------------------1.00---------------
........TTCTGCAGTTGCTCTAGAC........................................................................................................................................................................................................................................................................................................... 191.000.00----------1.00-------------------------------------