ID: uc001ewg.2_intron_9_0_chr1_150979274_r.3p
GENE: (1)
chr1:150979224-150979473-


(1)
AGO2.ip
(9)
B-CELL
(1)
BRAIN
(14)
BREAST
(31)
CELL-LINE
(12)
CERVIX
(6)
HEART
(3)
HELA
(1)
KIDNEY
(8)
LIVER
(2)
OTHER
(31)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
ATACCCAGAGAGAGAGCCCAGATCCAACAAGCTGCTTCTGTCCAGCCCTTCTCCTCCCTACTTAGCAAGGGCACTTGCTCTTCCCTATTCTCACCAGAGAGGCACAAGCGCTCCGTCCCTTCTAGAGGCAGGCAGAGGGAAGAGAAAGGGTCTGTTGTTTTTCTCTCCTGTTTCTCGCTCCCTCTCTGCTGATCACAAAGCTGCTGACCGGGTCAGAAAGTCCTGATGGAAATCCACCAGCGCTGGGCAG
...................................................................................................((((.......(((..((((((.............)))))).))).....)))).................................................................................................
..................................................................................................99.........................................................158..........................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577739(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR040016(GSM532901)
G645N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040027(GSM532912)
G220T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359188(GSM359188)
HepG2_2pM_2. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR029129(GSM416758)
SW480. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM532890(GSM532890)
G576T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR040006(GSM532891)
G601N. (cervix)
SRR029126(GSM416755)
143B. (cell line)
SRR040017(GSM532902)
G645T. (cervix)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................................................AGGGAAGAGAAAGGGTCTG................................................................................................19121.0021.00---1.005.00----1.001.00--3.00--------------2.00-1.00--------1.00-------------1.00-1.00----1.001.00--------1.00---------------------------------------1.00-------------
........................................................................................................................................GGGAAGAGAAAGGGTCTGTTGTTTTTT.......................................................................................278.000.00-8.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................AGAGGGAAGAGAAAGGGT...................................................................................................1815.005.00---------1.00------------------------------------1.00--------------------------------------1.00--------------------------1.001.00----------
......................................................................................................................................GAGGGAAGAGAAAGGGTCTG................................................................................................2014.004.00-----1.00-1.001.00-1.00-----------------------------------------------------------------------------------------------------------------
.........GAGAGAGCCCAGATCCAACAAGC..........................................................................................................................................................................................................................2314.004.004.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GCAGAGGGAAGAGAAAGGGT...................................................................................................2014.004.00-------1.00----------------1.00----------------------------------1.00--------1.00-------------------------------------------------------
.......................................................................................................................................AGGGAAGAGAAAGGGTCT.................................................................................................1813.003.00----------1.00--------------------------------------------------------------1.00---------------------------1.00----------------------
.................................................................................................................................................AAGGGTCTGTTGTTTTTCTC.....................................................................................2013.003.00-----------------3.00----------------------------------------------------------------------------------------------------------
............................................................................................................................................AGAGAAAGGGTCTGTTGTTT..........................................................................................2013.003.001.00------------------------2.00--------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAGAGAAAGGGTCTG................................................................................................1813.003.00--1.00-1.001.00----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAGAGAAAGGGTCTGTTG.............................................................................................1813.003.00--1.001.00-----------------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................GAGGGAAGAGAAAGGGTCTGT...............................................................................................2112.002.00---1.001.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GAGAAAGGGTCTGTTGTTTTT........................................................................................2112.002.00---2.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................ACAAGCGCTCCGTCCCTT.................................................................................................................................1812.002.00---------------------------------------------------------------------------------1.00-----1.00------------------------------------
........................................................................................................................................GGGAAGAGAAAGGGTCTGTTG.............................................................................................2112.002.00---1.00----1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................CAGGCAGAGGGAAGAGAAAGGGT...................................................................................................2312.002.00---------------1.00---1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................AGAGGGAAGAGAAAGGGTCT.................................................................................................2012.002.00--------------------------1.00---------1.00---------------------------------------------------------------------------------------
........................................................................................................CAAGCGCTCCGTCCCTTCT...............................................................................................................................1912.002.00-2.00--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAGAGAAAGGGTCTGT...............................................................................................1912.002.00---------------------------1.00----------------------1.00-------------------------------------------------------------------------
........................................................................................................................................................................................................CTGCTGACCGGGTCAGAA................................1811.001.00------------------------------------------------------1.00---------------------------------------------------------------------
.....................................................................................................................................AGAGGGAAGAGAAAGGGTCTG................................................................................................2111.001.00-------------------------------------------------------------------------------------------------1.00--------------------------
.........................................................................................................................................................................................CTGCTGATCACAAAGCTGCTGA...........................................2211.001.00---------------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTGCTGATCACAAAGCTGC..............................................1911.001.00--------------------------------------------------------------------------------------------------------1.00-------------------
..............................................................................................................................GGCAGGCAGAGGGAAGAGAA........................................................................................................2011.001.00------------------------------------------------------------------------------------------1.00---------------------------------
..................................................................................................................................................................................TCCCTCTCTGCTGATCACAAAG..................................................2211.001.00--------------------------------------------------------------------------------------------1.00-------------------------------
............................................................................................................................................AGAGAAAGGGTCTGTTGTTG..........................................................................................2011.001.001.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAGAGAAAGGGTCTGTTGTT...........................................................................................2011.001.00------------------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................AAGCGCTCCGTCCCTTCTAGA............................................................................................................................2111.001.00---------------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTGCTGATCACAAAGCTG...............................................1811.001.00----------------------------------------------------1.00-----------------------------------------------------------------------
......................................................................................................CACAAGCGCTCCGTCC....................................................................................................................................1611.001.00--------------------------------------------------------------------------------------1.00-------------------------------------
..........................................................................................................................TAGAGGCAGGCAGAGGGAAGAG..........................................................................................................2211.001.00--------------------------------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................AGGGAAGAGAAAGGGTCTGTTGTTTTT........................................................................................2711.001.00------------------------------------------------1.00---------------------------------------------------------------------------
........................................................................................................................................GGGAAGAGAAAGGGTCTGTTGTT...........................................................................................2311.001.00------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................................CTGTTTCTCGCTCCCTCTCTG..............................................................2111.001.001.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GACCGGGTCAGAAAGTCCTGATGG.....................2411.001.00-----------------------------------------------1.00----------------------------------------------------------------------------
....................................................................................................................CCCTTCTAGAGGCAGGCAGAG.................................................................................................................2111.001.00------------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................AGGCACAAGCGCTCCGTC.....................................................................................................................................1811.001.00------------------1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................GCAGAGGGAAGAGAAATGGT...................................................................................................201.000.00-----------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................CAGAGGGAAGAGAAAGGGT...................................................................................................1911.001.00----------------1.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................CTTCTAGAGGCAGGCAGAGGG...............................................................................................................2111.001.00----------------------------------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................................CACAAAGCTGCTGACCGGG......................................1911.001.00-----1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GAGAAAGGGTCTGTTGTTT..........................................................................................1911.001.00----------------------------------------------------------------------------------1.00-----------------------------------------
....................................................................................................................................CAGAGGGAAGAGAAAGGGTC..................................................................................................2011.001.00------------------------------------------------------------------------------------------------------1.00---------------------
...............................................................................................AGAGAGGCACAAGCGCTCCGTC.....................................................................................................................................2211.001.00------------------------------------1.00---------------------------------------------------------------------------------------
...................................................................................................AGGCACAAGCGCTCCGT......................................................................................................................................1711.001.00--------------------------------------------------------------------------1.00-------------------------------------------------
.......................................................................................................................................AGGGAAGAGAAAGGGTCTGTTG.............................................................................................2211.001.00--------1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGAGGGAAGAGAAAGGGTCTG................................................................................................2211.001.00-----------------------------------------------------------------------1.00----------------------------------------------------
...........................................................................................................................AGAGGCAGGCAGAGGGAAGAGAAAGGTA...................................................................................................281.000.00---------------------1.00------------------------------------------------------------------------------------------------------
......................................................................................................................................GAGGGAAGAGAAAGGGTCTGA...............................................................................................2111.004.00--------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAGAGAAAGGGTCTGTT..............................................................................................2011.001.00---------------1.00------------------------------------------------------------------------------------------------------------
......................................................................................................................................GAGGGAAGAGAAAGGGTCTGTTGTTTT.........................................................................................2711.001.00--------------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................AGAGGCAGGCAGAGGGAAGAGAAAGGGTC..................................................................................................2911.001.00--------------------------------------------------------------------------------------------------1.00-------------------------
...............................................................................................AGAGAGGCACAAGCGCTCCG.......................................................................................................................................2011.001.00----------------------------------------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................................CTCCTGTTTCTCGCTCCCT...................................................................1911.001.00--------------------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................AGGCAGAGGGAAGAGAAAGGG....................................................................................................2111.001.00--------------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................GAGAAAGGGTCTGTTG.............................................................................................1631.001.00--------------------------------------0.67-----0.33-------------------------------------------------------------------------------
...............................................................................................................................GCAGGCAGAGGGAAGAGAAA.......................................................................................................2011.001.00-------------------------------------------------------------------1.00--------------------------------------------------------
............................................................................................................................................AGAGAAAGGGTCTGTTGT............................................................................................1811.001.00---------------------------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................AGAGGCAGGCAGAGGGAAGAG..........................................................................................................2111.001.00---------1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................AGAGAGGCACAAGCGCTCCGT......................................................................................................................................2111.001.00-----1.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TCTGTTGTTTTTCTCTCCTG................................................................................2011.001.001.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AAGGGTCTGTTGTTTTTCT......................................................................................1911.001.00------------------------------------------------------------------1.00---------------------------------------------------------
............................................................................................................................................AGAGAAAGGGTCTGTTGTT...........................................................................................1911.001.00----------------------------------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................GAGGGAAGAGAAAGGGTCTGTT..............................................................................................2211.001.00----------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................AAAGGGTCTGTTGTTTTTCTCTCCTGT...............................................................................2711.001.00-------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GTCAGAAAGTCCTGATG......................1711.001.00--------------------------------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................AAAGGGTCTGTTGTTTTT........................................................................................1811.001.00---1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................................................GTCCCTTCTAGAGGCAGGCAG...................................................................................................................2111.001.00--------------------------------1.00-------------------------------------------------------------------------------------------
..........................ACAAGCTGCTTCTGTCCA..............................................................................................................................................................................................................1811.001.00---------------------------------------------------1.00------------------------------------------------------------------------
....................................................................................................................CCCTTCTAGAGGCAGGCAGA..................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------------1.00------------
...............................................................................................................................GCAGGCAGAGGGAAGAGAAAGGTT...................................................................................................241.000.00---------------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................CCGTCCCTTCTAGAGGCAGGCAGA..................................................................................................................2411.001.00----------------------------------------------------------------------------------------------------1.00-----------------------
.......................................................................................................................................AGGGAAGAGAAAGGGTCTGTT..............................................................................................2111.001.00-----------------------------------------------------------------------------------------------1.00----------------------------
...........................................................................................................................................AAGAGAAAGGGTCTGTTGTTT..........................................................................................2111.001.00-------------------------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................TCTCTCCTGTTTCTCGCTCCCTCTCTGC.............................................................2811.001.00---------------------------------1.00------------------------------------------------------------------------------------------
.........................................................................................................................CTAGAGGCAGGCAGAGGGAAG............................................................................................................2111.001.00--1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGAGGGAAGAGAAAGGGTCTGTT..............................................................................................2411.001.00-------------------------------------1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTGACCGGGTCAGAAAGTCCTGATGGA....................2811.001.00-------------------------------------------------------------------------------------------------------1.00--------------------
......................................................................................................................................GAGGGAAGAGAAAGGGTCTGTTG.............................................................................................2311.001.00---1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................ATCCACCAGCGCTGGG...1630.670.67------------------------------------------0.33---------------------------------------------------------------------------0.33-----
......................................................................................................................................GAGGGAAGAGAAAGGGTC..................................................................................................1820.500.50-------------0.50--------------------------------------------------------------------------------------------------------------
...............................................................................................................................GCAGGCAGAGGGAAGAGAA........................................................................................................1920.500.50---------------------------------------------------------------------------------------------------------------------0.50------
.............................................................................................................................AGGCAGGCAGAGGGAAGAG..........................................................................................................1920.500.50-------0.50--------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TAGAGGCAGGCAGAGGGAAG............................................................................................................2020.500.50------------------------------------------------------------------------------------------------------------0.50---------------
..................................................................................................................................................AGGGTCTGTTGTTTTTC.......................................................................................1720.500.50--------------------------------------------------------------------------------------------------------------------0.50-------
.................................................................................................................................AGGCAGAGGGAAGAGAAAG......................................................................................................1950.400.40----0.20-----------------------------------------0.20-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................TCCACCAGCGCTGGG...1550.400.40---------------------0.20-----------------------0.20------------------------------------------------------------------------------
................................................................................................................................CAGGCAGAGGGAAGAGAAAG......................................................................................................2030.330.33-------------------------------------------0.33--------------------------------------------------------------------------------
....................................................................................................................................CAGAGGGAAGAGAAAGGG....................................................................................................1850.200.20-----------------------------------------------------------------------------------------------------------------------0.20----
..............................................................................................................................................AGAAAGGGTCTGTTGT............................................................................................1660.170.17--------------------0.17-------------------------------------------------------------------------------------------------------
..................................................................................................................................GGCAGAGGGAAGAGAAAGG.....................................................................................................1960.170.17------------------------------------------------------------------------------------------------------------------------0.17---
..................................................................................................................................................AGGGTCTGTTGTTTTT........................................................................................1660.170.17-------------------------------------------------------------------------------------------------------------------------0.17--
...................................................................................................................................GCAGAGGGAAGAGAAAGG.....................................................................................................1870.140.14--------------------------------------------------------------------------------------------------------------------------0.14-
...........................................................................................................................AGAGGCAGGCAGAGGGA..............................................................................................................1780.120.12---------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
ATACCCAGAGAGAGAGCCCAGATCCAACAAGCTGCTTCTGTCCAGCCCTTCTCCTCCCTACTTAGCAAGGGCACTTGCTCTTCCCTATTCTCACCAGAGAGGCACAAGCGCTCCGTCCCTTCTAGAGGCAGGCAGAGGGAAGAGAAAGGGTCTGTTGTTTTTCTCTCCTGTTTCTCGCTCCCTCTCTGCTGATCACAAAGCTGCTGACCGGGTCAGAAAGTCCTGATGGAAATCCACCAGCGCTGGGCAG
...................................................................................................((((.......(((..((((((.............)))))).))).....)))).................................................................................................
..................................................................................................99.........................................................158..........................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577739(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR038861(GSM458544)
MM466. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR040016(GSM532901)
G645N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040027(GSM532912)
G220T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359188(GSM359188)
HepG2_2pM_2. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR029129(GSM416758)
SW480. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
GSM532890(GSM532890)
G576T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR040006(GSM532891)
G601N. (cervix)
SRR029126(GSM416755)
143B. (cell line)
SRR040017(GSM532902)
G645T. (cervix)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038856(GSM458539)
D11. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................GACGGAGCGCTTGTGCCTCTCTGGTGAGAATAGGGAAGAGCAAGTGCCCTTGCTAAGTAGGGAGGAGAAGGGCTGGACAGAAGCAGCTTGTT..................................................................................................................................... 9217.007.00------7.00---------------------------------------------------------------------------------------------------------------------
.................................GAGAAGGGCTGGACAGAAGC..................................................................................................................................................................................................... 2016.006.002.00----------------------2.00--------------------------------------------------------1.00----------------------------1.00--------------
...................................................................................CCTATTCTCACCAGAACA..................................................................................................................................................... 184.000.00---1.00-----1.00-------------------------------------------------------------------------1.001.00---------------------------------------
..................AAGCAGCTTGTTGGATCTG..................................................................................................................................................................................................................... 1914.004.00-----1.00------2.00----------------------------1.00----------------------------------------------------------------------------------
..................................GGAGAAGGGCTGGACAGAAG.................................................................................................................................................................................................... 2013.003.00--1.00-------------2.00-----------------------------------------------------------------------------------------------------------
.....................................AGGAGAAGGGCTGGACAG................................................................................................................................................................................................... 1822.502.50------------0.50-------0.50------------------0.500.500.50----------------------------------------------------------------------------------
.......................GAAGGGCTGGACAGAAGCAGCTTGTTGG....................................................................................................................................................................................................... 2812.002.00-----------------------------------2.00----------------------------------------------------------------------------------------
.................AAGCAGCTTGTTGGATCTGG..................................................................................................................................................................................................................... 2012.002.00--2.00-------------------------------------------------------------------------------------------------------------------------
...........................GCTGGACAGAAGCAGCTTG............................................................................................................................................................................................................ 1912.002.00-----2.00----------------------------------------------------------------------------------------------------------------------
...................................................................................CGGAGCGCTTGTGCCTCTCTGGTGAGAATAGG....................................................................................................................................... 3212.002.00----------------------2.00-----------------------------------------------------------------------------------------------------
..............CAGCTTGTTGGATCTGGGCT........................................................................................................................................................................................................................ 2012.002.00-----------1.001.00---------------------------------------------------------------------------------------------------------------
...............................GAAGGGCTGGACAGAAGCAG....................................................................................................................................................................................................... 2012.002.00--2.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCCTCTCTGCTGATCCGAT.................................................... 191.000.00--------------1.00-------------------------------------------------------------------------------------------------------------
........................................AAGTGCCCTTGCTAAGTAGGGAGGAGAAGGGCTGGA.............................................................................................................................................................................. 3611.001.00---------------------------------------------------------------1.00------------------------------------------------------------
.................AGCAGCTTGTTGGATCTGG...................................................................................................................................................................................................................... 1911.001.00-----------------------------------------------------------------------------1.00----------------------------------------------
................................AAGGGCTGGACAGAAGCA........................................................................................................................................................................................................ 1811.001.00----------------------------------------------------------------------------------------------1.00-----------------------------
...........................................AGCCCTTCTCCTCCCCCG............................................................................................................................................................................................. 181.000.00-----------------------------------------------------------------------------------------1.00----------------------------------
......AGAGAGAGAGCCCAGATA.................................................................................................................................................................................................................................. 181.000.00-------------------------------------------------------------------------------1.00--------------------------------------------
...............................GGAGGAGAAGGGCTGGACAGAAGCAG................................................................................................................................................................................................. 2611.001.00----------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................GAGAAACAGGAGAGAAAAA.......................................................................... 1911.001.00---------------------------------------------------------------------------------------------1.00------------------------------
..............................AGGGCTGGACAGAAGCAGC......................................................................................................................................................................................................... 1911.001.00-----------1.00----------------------------------------------------------------------------------------------------------------
........................................TCCAGCCCTTCTCCTCCCTAATC........................................................................................................................................................................................... 231.000.00-------------------------------------------1.00--------------------------------------------------------------------------------
..............GCTTGTTGGATCTGGGCT.......................................................................................................................................................................................................................... 1811.001.00------------------------------------------------------------------------------------------------1.00---------------------------
................AGCAGCTTGTTGGATCTGGG...................................................................................................................................................................................................................... 2011.001.00----------------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................CTCTCTGGTGAGAATAGGGAAGAGCAAGTGCC..................................................................................................................................................... 3211.001.00----------------------------------------------------------1.00-----------------------------------------------------------------
.................GAAGCAGCTTGTTGGATCTGG.................................................................................................................................................................................................................... 2111.001.00--1.00-------------------------------------------------------------------------------------------------------------------------
...................................GGAGAAGGGCTGGACAGAA.................................................................................................................................................................................................... 1911.001.00-----------------------------1.00----------------------------------------------------------------------------------------------
..........................AGAAGGGCTGGACAGAAGCAGCTTGT...................................................................................................................................................................................................... 2611.001.00------------------------------------------------------------------------1.00---------------------------------------------------
.......................TGGACAGAAGCAGCTTGTTGG.............................................................................................................................................................................................................. 2111.001.00----------------------------------------------------------------------------------------------------------1.00-----------------
................................................................................................................................................................................................TTTCTGACCCGGTCAGCAGCTTTGTGA............................... 2711.001.00---------------------------------------------------------1.00------------------------------------------------------------------
.....................GACAGAAGCAGCTTGTTGGAT................................................................................................................................................................................................................ 2111.001.00------------------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................TAGAAGGGACGGAGCGCTTG.............................................................................................................................. 2011.001.00----1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................CCTATTCTCACCAGAACAA.................................................................................................................................................... 191.000.00---------------------------------------------------------------------------------------------------------1.00------------------
........................................TCCAGCCCTTCTCCTCCCAG.............................................................................................................................................................................................. 201.000.00--1.00-------------------------------------------------------------------------------------------------------------------------
................AAGCAGCTTGTTGGATCTGGG..................................................................................................................................................................................................................... 2111.001.00-----------1.00----------------------------------------------------------------------------------------------------------------
........................................TCCAGCCCTTCTCCTCCCTAT............................................................................................................................................................................................. 211.000.00-----------------------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................CAGAGAGGGAGCGAGAAA.............................................................. 1811.001.00---------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................CCTATTCTCACCAGAAC...................................................................................................................................................... 171.000.00-------1.00--------------------------------------------------------------------------------------------------------------------
...........................CTGGACAGAAGCAGCTTG............................................................................................................................................................................................................. 1811.001.00-------------------------------------1.00--------------------------------------------------------------------------------------
..........................TGGACAGAAGCAGCTTGT.............................................................................................................................................................................................................. 1811.001.00-----1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AGGACTTTCTGACCCGGTC.......................... 1911.001.00----------------------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................AGGGTCTGTTGTTTTGGGT..................................................................................... 191.000.00---------------------------------------------------------------------1.00------------------------------------------------------
..................AGCAGCTTGTTGGATCTG...................................................................................................................................................................................................................... 1811.001.00-------------------------------------------------1.00--------------------------------------------------------------------------
.............................................CCCTTCTCCTCCCTACAAAG......................................................................................................................................................................................... 201.000.00--------------1.00-------------------------------------------------------------------------------------------------------------
..........AGCAGCTTGTTGGATCTGGGCTCTCT...................................................................................................................................................................................................................... 2611.001.00------------------------------------------1.00---------------------------------------------------------------------------------
.............................GAGAAGGGCTGGACAGAAGCAGCT..................................................................................................................................................................................................... 2411.001.001.00---------------------------------------------------------------------------------------------------------------------------
........................................AGGGAGGAGAAGGGCTGGA............................................................................................................................................................................................... 1911.001.00-------------------------------1.00--------------------------------------------------------------------------------------------
.............................GGGCTGGACAGAAGCAGCT.......................................................................................................................................................................................................... 1911.001.00------------------1.00---------------------------------------------------------------------------------------------------------
.................................GAAGGGCTGGACAGAAGC....................................................................................................................................................................................................... 1811.001.00--------------------1.00-------------------------------------------------------------------------------------------------------
......................................................................................................AGGGACGGAGCGCTTGTG.................................................................................................................................. 1811.001.00---1.00------------------------------------------------------------------------------------------------------------------------
............GACAGAAGCAGCTTGTTGGATCTGGGCTCT................................................................................................................................................................................................................ 3011.001.00---------------------------------------------------------------------------------------------------1.00------------------------
...................................GAGGAGAAGGGCTGGACAGAA.................................................................................................................................................................................................. 2111.001.00-----------1.00----------------------------------------------------------------------------------------------------------------
......................TGGACAGAAGCAGCTTGTTGGA.............................................................................................................................................................................................................. 2211.001.00--------------------------------------------------------------1.00-------------------------------------------------------------
......................AGGGCTGGACAGAAGCAGCTTGTTGGA......................................................................................................................................................................................................... 2711.001.00-------------------1.00--------------------------------------------------------------------------------------------------------
.....................ATCCAACAAGCTGCTTCATGG................................................................................................................................................................................................................ 211.000.00--------------------------------------1.00-------------------------------------------------------------------------------------
.........................AACAAGCTGCTTCTGTCCAA............................................................................................................................................................................................................. 201.000.00-----------------------------------------------------------------------------------------------------------1.00----------------
..................................................................................................................................................................................................................GGTCAGAAAGTCCTGACGC..................... 191.000.00-------1.00--------------------------------------------------------------------------------------------------------------------
...............AGCAGCTTGTTGGATCTGGGC...................................................................................................................................................................................................................... 2111.001.001.00---------------------------------------------------------------------------------------------------------------------------
.......................................TAAGTAGGGAGGAGAAGGGCTGGAC.......................................................................................................................................................................................... 2511.001.00-------------------------------------------------------------------------------------------1.00--------------------------------
..............................GCTGCTTCTGTCCAGCCCGGGG...................................................................................................................................................................................................... 221.000.00--------------1.00-------------------------------------------------------------------------------------------------------------
...............GCTTGTTGGATCTGGGC.......................................................................................................................................................................................................................... 1720.500.50------------------------------------------------------------------------------------------------------------------0.50---------
...............AGCTTGTTGGATCTGGGC......................................................................................................................................................................................................................... 1820.500.50------------------------------------------------------------------------------------------------------------0.50---------------
....................AAGCAGCTTGTTGGATC..................................................................................................................................................................................................................... 1720.500.50-------------------------------------------------------------------------------------------------------------------0.50--------