ID: uc001epj.2_intron_1_0_chr1_146661829_r.5p
GENE: FMO5(5)
chr1:146680214-146680463-


(2)
AGO2.ip 		(4)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(7)
LIVER 		(1)
OTHER 		(2)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
ATAAACCAAAGGTTTGACCATGAAATGTTTGGCCTGAAGCCTAAACACAGGTATGTTCCCAGGATGGGAGTGCAGGGATAGTGGCCAAAGCACAAGAATAAGGACTCTTCACACTGGCTAATAGTAAAGCCACCTCTACCCATACATTAAGAAAACCCACAGTGGCTGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCGGAGGCGGGTGGATCACCTGAGCTCAGGAGTTTGAGACCA
..................................................((((..((((.....))))))))........((((((......((((........)))).....))))))..................................................................................................................................
..................................................51.............................................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040015(GSM532900)
G623T. (cervix)		TAX577743(Rovira)
total RNA. (breast)
...........................................................................................................TTCACACTGGCTAATATCT............................................................................................................................199.000.009.00---------------------------
...........................................................................................................TTCACACTGGCTAATATCTG...........................................................................................................................206.000.006.00---------------------------
...........................................................................................................TTCACACTGGCTAATATCC............................................................................................................................195.000.005.00---------------------------
...........................................................................................................TTCACACTGGCTAATATCG............................................................................................................................194.000.004.00---------------------------
...........................................................................................................TTCACACTGGCTAATATTG............................................................................................................................193.000.003.00---------------------------
...........................................................................................................TTCACACTGGCTAATTTC.............................................................................................................................183.000.001.00---1.00----------1.00------------
...........................................................................................................TTCACACTGGCTAATATGC............................................................................................................................193.000.003.00---------------------------
.......................AATGTTTGGCCTGAAGCGAAC..............................................................................................................................................................................................................213.000.00-----3.00----------------------
..............................................................................................................................................................................................ATCCCAGCACTTTGGGAGGCGTGG....................................242.000.00-2.00--------------------------
...........................................................................................................TTCACACTGGCTAATCTC.............................................................................................................................182.000.00------------1.00-----1.00---------
...............................................................................................................................................................................................TCCCAGCACTTTGGGAGGCGGAGGCGGACAG............................312.000.00--2.00-------------------------
...........................................................................................................TTCACACTGGCTAATATCCG...........................................................................................................................202.000.002.00---------------------------
.............................................................................................................................................................................................................................GATCACCTGAGCTCAGGA...........1802.002.00--------2.00-------------------
....................TGAAATGTTTGGCCTGAAG...................................................................................................................................................................................................................1912.002.00---2.00------------------------
...........................................................................................................TTCACACTGGCTAATTTTG............................................................................................................................192.000.002.00---------------------------
...........................................................................................................TTCACACTGGCTAATTTCG............................................................................................................................192.000.002.00---------------------------
......................................................................................................................................................................................................ACTTTGGGAGGCGGAGGCGGGTGGACCA........................281.000.00-1.00--------------------------
........................................................TCCCAGGATGGGAGTCATG...............................................................................................................................................................................191.000.00---1.00------------------------
....................................................................................................................................................................GCTGGGCATGGTGGCTCACGCCTGGTA...........................................................271.000.00-------------1.00--------------
...................................................................................GCCAAAGCACAAGAATAAGGA..................................................................................................................................................2111.001.00------1.00---------------------
...AACCAAAGGTTTGACCATG....................................................................................................................................................................................................................................1911.001.00------1.00---------------------
...........................................................................................................TTCACACTGGCTAATTCCC............................................................................................................................191.000.001.00---------------------------
...........................................................................................................TTCACACTGGCTAATTTCT............................................................................................................................191.000.001.00---------------------------
...........................................................................................................TTCACACTGGCTAATATCGG...........................................................................................................................201.000.001.00---------------------------
.................................................................................................................................................................................................................................ACCTGAGCTCAGGAGTTTGAGACCAACCG291.000.00--1.00-------------------------
................................................................................................AATAAGGACTCTTCACACTGGCT...................................................................................................................................2311.001.00----1.00-----------------------
...................................................................................................................................................TAAGAAAACCCACAGTGGCTGGGAA..............................................................................251.000.00---------1.00------------------
.........................................................................................................................................................................................................TTGGGAGGCGGAGGCGGGTGGGCG.........................241.000.00-1.00--------------------------
...........................................................................................................TTCACACTGGCTAATCTTC............................................................................................................................191.000.00-------1.00--------------------
..................................................................................................................................................................................................................................CCTGAGCTCAGGAGTTTGAGACCA2401.001.00-------------------------1.00--
..........................................................................................................CTTCACACTGGCTAAGGTC.............................................................................................................................191.000.00----------------------1.00-----
..................................................................................................................................................................TGGCTGGGCATGGTGGCTCACGCACG..............................................................261.000.00-1.00--------------------------
....................................................................................................................................................................................................................AGGCGGGTGGATCACCTGAGCTCAGGAGCTTG......321.000.00--1.00-------------------------
...................................................................................................................................................TAAGAAAACCCACAGTGGCTGGGGA..............................................................................251.000.00---------1.00------------------
...............................................................ATGGGAGTGCAGGGATCT.........................................................................................................................................................................181.000.00--------------1.00-------------
..........................................................................................................................................................................................................TGGGAGGCGGAGGCGGGTGGACCA........................241.000.00-1.00--------------------------
...................................................................................................AAGGACTCTTCACACTGGCTAAT................................................................................................................................2311.001.00----------1.00-----------------
...........................................................................................................TTCACACTGGCTAATTTCC............................................................................................................................191.000.00------------------------1.00---
...........................................................................................................................................................................................................................TGGATCACCTGAGCTCAGGAGTGCG......251.000.00-1.00--------------------------
...........................................................................................................TTCACACTGGCTAATATTC............................................................................................................................191.000.001.00---------------------------
.................................................................................................................................................................................................CCAGCACTTTGGGAGGCGTGG....................................211.000.00----------------1.00-----------
...........................................................................................................TTCACACTGGCTAATTAGC............................................................................................................................191.000.00--------------------------1.00-
...........................................................................................................TTCACACTGGCTAATAGACGC..........................................................................................................................211.000.00-----------------------1.00----
.............................................................................................AAGAATAAGGACTCTTCACACTGGATA..................................................................................................................................271.000.00----1.00-----------------------
...........................................................................................................TTCACACTGGCTAATATTCT...........................................................................................................................201.000.001.00---------------------------
...........................................................................................................TTCACACTGGCTAATTTTC............................................................................................................................191.000.001.00---------------------------
..............................................................................................................................................................................................................................ATCACCTGAGCTCAGGAGGTGC......221.000.00--1.00-------------------------
...............................GCCTGAAGCCTAAACAGAG........................................................................................................................................................................................................191.000.00------1.00---------------------
..............................................................................................AGAATAAGGACTCTTCACACTGGCT...................................................................................................................................2511.001.00----1.00-----------------------
...........................................................................................................TTCACACTGGCTAATTTTT............................................................................................................................191.000.001.00---------------------------
............................TTGGCCTGAAGCCTAAACACAGAG......................................................................................................................................................................................................241.000.00----------1.00-----------------
...........................................................................................................TTCACACTGGCTAATATCGT...........................................................................................................................201.000.001.00---------------------------
...........................................................................................................TTCACACTGGCTAATATCTT...........................................................................................................................201.000.00-------1.00--------------------
..............................................................................................................................................................................................ATCCCAGCACTTTGGGAGGCGGCTGG..................................261.000.00--1.00-------------------------
............................................................................................................................................................................................................GGAGGCGGAGGCGGGTGGCCCC........................221.000.00---1.00------------------------
...........................................................................................................TTCACACTGGCTAATACCT............................................................................................................................191.000.001.00---------------------------
......................................................................................................................................................................................................ACTTTGGGAGGCGGAGGCGGGTGGGCC.........................271.000.00--1.00-------------------------

Antisense strand
ATAAACCAAAGGTTTGACCATGAAATGTTTGGCCTGAAGCCTAAACACAGGTATGTTCCCAGGATGGGAGTGCAGGGATAGTGGCCAAAGCACAAGAATAAGGACTCTTCACACTGGCTAATAGTAAAGCCACCTCTACCCATACATTAAGAAAACCCACAGTGGCTGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCGGAGGCGGGTGGATCACCTGAGCTCAGGAGTTTGAGACCA
..................................................((((..((((.....))))))))........((((((......((((........)))).....))))))..................................................................................................................................
..................................................51.............................................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040015(GSM532900)
G623T. (cervix)		TAX577743(Rovira)
total RNA. (breast)
.................................................................................................................................................................GTGGCTGGGCATGGTGGCTCACGCCTGTGAGC......................................................... 322.000.00-2.00--------------------------
.....................................................................................................................................................................CTGGGCATGGTGGCTCACGCCTGTGCGG......................................................... 281.000.00--1.00-------------------------
...................................................................................................................................................TAAGAAAACCCACAGTG...................................................................................... 171.000.00-------------------1.00--------
...........................................................................................................................................................................................................GGGAGGCGGAGGCGGGTTC............................ 191.000.00-----------1.00----------------
.......................................................................................................................................................................................................................CGGGTGGATCACCTGAGCTCATAA........... 241.000.00--------------------1.00-------
..................................................................................................................................................................................................................................GTCTCAAACTCCTGAGCTCAGG.. 2201.001.00-----------------1.00----------
......................................................................................................TTTACTATTAGCCAGTGTGAAGAGTC.......................................................................................................................... 2611.001.00---------------------1.00------
.............................................................................................................................TGGGTAGAGGTGGCTTT............................................................................................................ 1720.500.50---------------------------0.50