ID: uc001epe.2_intron_0_0_chr1_146631222_r.3p
GENE: (7)
chr1:146631172-146631421-


(1)
AGO2.ip
(3)
B-CELL
(1)
BRAIN
(9)
BREAST
(12)
CELL-LINE
(3)
HEART
(3)
LIVER
(1)
OTHER
(16)
SKIN
(1)
TESTES
(2)
UTERUS

Sense strand
GGACACACTAAGTAGATTACCCAAGGCCACAAGTAGAATGATGATAGGAGTCAGAATTGGAACTAAAACTTATTTGACCTCCTGCTCTTATATCAAACTATCTCTGTTAAAAGTGAGTGACTGTGAAGGACTGATGACTGGGAAGAGCTACCTACTGTCTGAAGTAATGAATTAGCTGCGTATGTTTCTTTTCCTTGCAGGACAGTGTGATGGTCCTTAGCGCAACCCATCGCTACAAGAAGAAGTATGT
.................................................................................................................................((((.((...((((((((..((.(((.((((((.........))))..))))).))..))))))))..))...))))............................................
.........................................................................................................................122.................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029131(GSM416760)
MCF7. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029127(GSM416756)
A549. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................................................AGGACTGATGACTGGGGTG.........................................................................................................1912008.00768.001944.00-19.00-25.0010.009.00--1.00-------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGT..........................................................................................................181915.00768.00817.00-64.0014.004.0013.003.00----------------------------------------------
..............................................................................................................................AGGACTGATGACTGGG............................................................................................................161768.00768.00758.00--10.00-------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGG...........................................................................................................171234.00768.00222.00--10.00--1.00--1.00-------------------------------------------
..............................................................................................................................AGGACTGATGACTGG.............................................................................................................154197.00197.00196.00--0.50----------------------------------------------0.250.25-
..............................................................................................................................AGGACTGATGACTGGGATC.........................................................................................................19122.000.00-122.00---------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGATC..........................................................................................................184117.25197.00-117.25---------------------------------------------------
...............................................................................................................................GGACTGATGACTGGGGTG.........................................................................................................18466.5040.2563.50-0.25-1.750.250.75----------------------------------------------
...............................................................................................................................GGACTGATGACTGGG............................................................................................................15440.2540.2540.25----------------------------------------------------
...............................................................................................................................GGACTGATGACTGGGGT..........................................................................................................17440.0040.2539.50--0.25--0.25----------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGTGA........................................................................................................20139.00768.0027.00-6.00-2.001.001.00--2.00-------------------------------------------
...............................................................................................................................GGACTGATGACTGGGG...........................................................................................................16421.0040.2521.00----------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGATC........................................................................................................20117.00768.00-17.00---------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGTA.........................................................................................................19112.00768.0012.00----------------------------------------------------
...............................................................................................................................GGACTGATGACTGGGATC.........................................................................................................189.000.00-9.00---------------------------------------------------
.............................................................................................................................AAGGACTGATGACTGGGGTG.........................................................................................................207.000.007.00----------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGAT..........................................................................................................187.000.00-7.00---------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGGG.........................................................................................................1916.00768.006.00----------------------------------------------------
...............................................................................................................................GGACTGATGACTGGGGTGA........................................................................................................1944.7540.253.25-0.75-0.500.25-----------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGG..........................................................................................................1814.00768.002.00--1.00-1.00-----------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGCG.........................................................................................................1914.00768.004.00----------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGTGT........................................................................................................2013.00768.00--3.00--------------------------------------------------
........................................................................................................................................ACTGGGAAGAGCTACCTACTGTGAA.........................................................................................252.000.00------------------2.00----------------------------------
...................................................................................................................................TGATGACTGGGAAGACATT....................................................................................................192.000.00---------------------------------1.00-----------1.00-------
............................................................................................................................GAAGGACTGATGACTGGG............................................................................................................1812.002.00---1.00-1.00-----------------------------------------------
.....................................................................................................................................ATGACTGGGAAGAGCTAC...................................................................................................1812.002.00--------------2.00--------------------------------------
.......................................................................................................................ACTGTGAAGGACTGATGACTGGGAAGAGC......................................................................................................2912.002.00-----------------2.00-----------------------------------
..............................................................................................................................AGGACTGATGACTGGGGTT.........................................................................................................1912.00768.001.00-1.00--------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGC..........................................................................................................1812.00768.002.00----------------------------------------------------
................................................................................................................................GACTGATGACTGGGATG.........................................................................................................172.000.002.00----------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGAG.........................................................................................................1912.00768.001.00-----1.00----------------------------------------------
................................................................................................................................................................................TGCGTATGTTTCTTTTCCTTGCAGGACAG.............................................2912.002.00------------2.00----------------------------------------
............................................................................................................................GAAGGACTGATGACTGGGGT..........................................................................................................2012.002.00-----2.00-----------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGACG.........................................................................................................191.000.001.00----------------------------------------------------
...............................AGTAGAATGATGATAGGAGTCAGAATTGG..............................................................................................................................................................................................2911.001.00--------------------------------1.00--------------------
..........................................................................................................................GTGAAGGACTGATGACTGGGAAGAGC......................................................................................................2611.001.00-------1.00---------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGGTAA........................................................................................................2011.00768.00--1.00--------------------------------------------------
............................................................................................................................GAAGGACTGATGACTGGGAAGAGCTA....................................................................................................2611.001.00-------1.00---------------------------------------------
.............................CAAGTAGAATGATGATAGGAGTCAGAA..................................................................................................................................................................................................2711.001.00----------1.00------------------------------------------
.............................................................................................................................AAGGACTGATGACTGGGGT..........................................................................................................191.000.001.00----------------------------------------------------
....................CCAAGGCCACAAGTAGAATGATGATA............................................................................................................................................................................................................2611.001.00-------1.00---------------------------------------------
.........................................................................................................................TGTGAAGGACTGATGACTGGGAAGAGT......................................................................................................271.000.00-------1.00---------------------------------------------
..................................AGAATGATGATAGGAGTCAG....................................................................................................................................................................................................2011.001.00------------------------------------1.00----------------
..............................AAGTAGAATGATGATAGGAGTCAG....................................................................................................................................................................................................2411.001.00----------1.00------------------------------------------
....................................................................................................................................GATGACTGGGAAGAGCTACCTACT..............................................................................................2411.001.00----------1.00------------------------------------------
.................................................................................................................................ACTGATGACTGGGAAACGG......................................................................................................191.000.00---------------------------1.00-------------------------
......................................................................................................................................................CCTACTGTCTGAAGTAATGAATTAGCTGCGTA....................................................................3211.001.00-------------------------1.00---------------------------
........................................................................................................................................................................................TTTCTTTTCCTTGCACAG................................................181.000.00-----------------------------------------------1.00-----
..............................................................................................................................AGGACTGATGACTGGGGA..........................................................................................................1811.00768.001.00----------------------------------------------------
....................................................................................................................................................................................................................................ATCGCTACAAGAAGAAGTATG.2111.001.00--------------------------------------------1.00--------
......ACTAAGTAGATTACCCAAGGCCACAAGTA.......................................................................................................................................................................................................................2911.001.00--------------------------1.00--------------------------
...................CCCAAGGCCACAAGTAGAATGATG...............................................................................................................................................................................................................2411.001.00----------------------------1.00------------------------
........................................................................................................................................................................................TTTCTTTTCCTTGCAGCA................................................181.000.00-------------1.00---------------------------------------
........................................................................................................................................................TACTGTCTGAAGTAATGAATTAGCTGC.......................................................................2711.001.00-------1.00---------------------------------------------
................................................................................................................................GACTGATGACTGGGAAGGAGG.....................................................................................................211.000.00-------------1.00---------------------------------------
............................................................................................................................................................................................................GTGTGATGGTCCTTAGCGCAACC.......................2311.001.00----------------------------------------------1.00------
.............................................................................................................................AAGGACTGATGACTGGGGCG.........................................................................................................201.000.001.00----------------------------------------------------
....................................................................................................................................GATGACTGGGAAGAGCTACCTACTGT............................................................................................2611.001.00----------------------------------------1.00------------
............................................................................................................AAAAGTGAGTGACTGTGAAGGACTGATGACTGG.............................................................................................................3311.001.00-------------------1.00---------------------------------
.................................................................................................................TGAGTGACTGTGAAGGACTCTG...................................................................................................................221.000.00----------------------1.00------------------------------
..............................................................................................................................AGGACTGATGACTGGGTG..........................................................................................................1811.00768.001.00----------------------------------------------------
...........................................ATAGGAGTCAGAATTGGAA............................................................................................................................................................................................1911.001.00---------------------1.00-------------------------------
.........................................................................................................................TGTGAAGGACTGATGACTGGGAAGAGC......................................................................................................2711.001.00-------1.00---------------------------------------------
......................AAGGCCACAAGTAGAATGATG...............................................................................................................................................................................................................2111.001.00-----------------------------------1.00-----------------
..........................................................................................................................GTGAAGGACTGATGACTGGGAAGAG.......................................................................................................2511.001.00-------1.00---------------------------------------------
............TAGATTACCCAAGGCCACAAGTAG......................................................................................................................................................................................................................2411.001.00----------1.00------------------------------------------
...........................................................................................................................TGAAGGACTGATGACTCTG............................................................................................................191.000.00-----------------------1.00-----------------------------
...............................................................................................................................GGACTGATGACTGGGGG..........................................................................................................1740.7540.250.75----------------------------------------------------
...............................................................................................................................GGACTGATGACTGGGGGG.........................................................................................................1840.7540.250.75----------------------------------------------------
..............................................................................................................................AGGACTGATGACTGGTGTG.........................................................................................................1940.50197.000.50----------------------------------------------------
......................................................AATTGGAACTAAAACTT...................................................................................................................................................................................1720.500.50------------------------------------------------0.50----
..............................................................................................................................AGGACTGATGACTGGAGTG.........................................................................................................1940.50197.000.25------------------------------------------------0.25---
..............................................................................................................................AGGACTGATGACTGGCTC..........................................................................................................1840.25197.00-0.25---------------------------------------------------
.....................................................................................................................................................................................................CAGGACAGTGTGATGG.....................................1650.200.20----------------------------------------------------0.20

Antisense strand
GGACACACTAAGTAGATTACCCAAGGCCACAAGTAGAATGATGATAGGAGTCAGAATTGGAACTAAAACTTATTTGACCTCCTGCTCTTATATCAAACTATCTCTGTTAAAAGTGAGTGACTGTGAAGGACTGATGACTGGGAAGAGCTACCTACTGTCTGAAGTAATGAATTAGCTGCGTATGTTTCTTTTCCTTGCAGGACAGTGTGATGGTCCTTAGCGCAACCCATCGCTACAAGAAGAAGTATGT
.................................................................................................................................((((.((...((((((((..((.(((.((((((.........))))..))))).))..))))))))..))...))))............................................
.........................................................................................................................122.................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029131(GSM416760)
MCF7. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029127(GSM416756)
A549. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................GAAGAGCTACCTACTAGTC.......................................................................................... 1910.000.00-----------4.00---2.00-------------1.00----1.00--1.00----1.00----------
..............................................................................................................................AGGACTGATGACTGGGCCT......................................................................................................... 1944.000.00--------4.00--------------------------------------------
..............................................................................................................................AGGACTGATGACTGGGCC.......................................................................................................... 1843.000.00--------1.00-------2.00------------------------------------
............................ACAAGTAGAATGATGAG............................................................................................................................................................................................................. 172.000.00------------------------1.00-----1.00----------------------
.............................................................................................................................................GAAGAGCTACCTACTAGT........................................................................................... 181.000.00---------------------------------------1.00-------------
.............................................................................CCTCCTGCTCTTATATCACAC........................................................................................................................................................ 211.000.00-----------------------------------------1.00-----------
........................................................................TTTGACCTCCTGCTCCGA................................................................................................................................................................ 181.000.00-------------------------------1.00---------------------
............................................................................................................................GAAGGACTGATGACTGGTC........................................................................................................... 191.000.00-------------------------------------------1.00---------
...............................................................................................................................GGACTGATGACTGGGCTC......................................................................................................... 1841.000.00--------------------1.00--------------------------------
.............................................................................................................................................GAAGAGCTACCTACTATTC.......................................................................................... 191.000.00--------------------------------------1.00--------------