ID: uc001enj.2_intron_1_0_chr1_145415316_f.5p
GENE: HFE2(2)
chr1:145415266-145415515+


(1)
AGO2.ip 		(6)
B-CELL 		(6)
BREAST 		(18)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(7)
LIVER 		(1)
OTHER 		(6)
SKIN 		(1)
TESTES

Sense strand
CTTCTGTCTTTAGCTCATTCTCAATGCAAGATCCTCCGCTGCAATGCTGAGTACGTATCGTCCACTCTGAGCCTTAGAGGTGGGGGTTCATCAGGAGCACTTCGAGGAGGAGGAGGAGGAGGCCGGGGTGGAGGGGTGGGCTCTGGCGGCCTCTGTCGAGCCCTCCGCTCCTATGCGCTCTGCACTCGGCGCACCGCCCGCACCTGCCGCGGGGACCTCGCCTTCCATTCGGCGGTACATGGCATCGAAG
...................................................................................................((((.....))))..((.((..((((((..((((.((.((((((.(((((...))))))))))).)).))))..(((.....)))))))))...))..))...................................................
.................................................................................................98....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM532877(GSM532877)
G691N. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
......................................................................................................CGAGGAGGAGGAGGAGGATA................................................................................................................................20020.003.00-4.003.00-2.00-3.00--3.003.00-1.00----------------------------------1.00-------
.............................................................................................................................GGGTGGAGGGGTGGGCTCTGGCGGC....................................................................................................2515.005.00---5.00---------------------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGA..................................................................................................................................1803.003.00--------1.00--------1.00-1.00-----------------------------------
...............................................TGAGTACGTATCGTCCACT........................................................................................................................................................................................1912.002.00----2.00--------------------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGATAA...............................................................................................................................2102.003.00--1.00---------1.00------------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGATTT...............................................................................................................................2102.003.00--1.00-------------------1.00--------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGAG.................................................................................................................................1902.002.00--------1.00----------1.00-----------------------------------
.........................................................................................................GGAGGAGGAGGAGGAGGC...............................................................................................................................1802.002.00--------1.00--------1.00-------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGAGGCC..............................................................................................................................2221.501.50----------------------0.50--------------------------0.50--0.50--
.....................................................................................................................................................................................................................................CGGCGGTACATGGCATCGAAGAACT251.000.00-----1.00-------------------------------------------------
...........................................................................................................................................................................................................CTGCCGCGGGGACCTCGCCTTCC........................2311.001.00-------1.00-----------------------------------------------
......................................................................................................................GAGGCCGGGGTGGAGTTT..................................................................................................................181.000.00--------------------1.00----------------------------------
............................................................................................................................................................................ATGCGCTCTGCACTCGGCGCACCG......................................................2411.001.001.00------------------------------------------------------
..................................................................................................................................................................................................................................ATTCGGCGGTACATGGCATA....201.000.001.00------------------------------------------------------
...............CATTCTCAATGCAAGATCCTCCGCTGCAAT.............................................................................................................................................................................................................3011.001.00-----1.00-------------------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGAGGGAA.............................................................................................................................2301.001.00---------------------1.00---------------------------------
.....................................................................................................TCGAGGAGGAGGAGGAGACCA................................................................................................................................211.000.00------------------------------1.00------------------------
.................................................................................................................AGGAGGAGGCCGGGGTAGG......................................................................................................................191.000.00----------------------------------------1.00--------------
.....................................GCTGCAATGCTGAGTACGTAT................................................................................................................................................................................................2111.001.001.00------------------------------------------------------
.....................CAATGCAAGATCCTCCGCTGCAATG............................................................................................................................................................................................................2511.001.00--------------------------1.00----------------------------
............................................................................................................................................................CGAGCCCTCCGCTCCGAC............................................................................181.000.00----------------------------------1.00--------------------
.................................................................................................................................................................................................................................CATTCGGCGGTACATGGGAT.....201.000.001.00------------------------------------------------------
...............................................................................................................................................................................................................................TCCATTCGGCGGTACATGGGATG....231.000.001.00------------------------------------------------------
...........................................................................................................................CGGGGTGGAGGGGTGTCT.............................................................................................................181.000.00----------------1.00--------------------------------------
.......................................................................................................GAGGAGGAGGAGGAGGAGGC...............................................................................................................................2001.001.00--------------1.00----------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGCGA................................................................................................................................2001.001.00------------------------1.00------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGAGGCCA.............................................................................................................................2321.001.50------------------------------------------------0.50--0.50---
..........................................................................................................................................................................................................................CGCCTTCCATTCGGCGGTACATGGCATCG...2911.001.00-------1.00-----------------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGTT.................................................................................................................................1901.001.00------1.00------------------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGATGT...............................................................................................................................2101.003.00-----------1.00-------------------------------------------
..................................................GTACGTATCGTCCACTCTGAGC..................................................................................................................................................................................2211.001.00-------1.00-----------------------------------------------
...........................................................................AGAGGTGGGGGTTCACATA............................................................................................................................................................191.000.00-------------------------1.00-----------------------------
.........................................................................TTAGAGGTGGGGGTTCACC..............................................................................................................................................................191.000.00------------------1.00------------------------------------
.....................................................................................................TCGAGGAGGAGGAGGAGGACTA...............................................................................................................................221.000.00--------------------------------------------1.00----------
...........................................................................AGAGGTGGGGGTTCATCAGGA..........................................................................................................................................................2111.001.00-----1.00-------------------------------------------------
........................................GCAATGCTGAGTACGTATA...............................................................................................................................................................................................191.000.00-----1.00-------------------------------------------------
.............................................................................................................................................TCTGGCGGCCTCTGTCCGT..........................................................................................191.000.00---------------------------------------1.00---------------
......................................................................................................CGAGGAGGAGGAGGAGGAGTTT..............................................................................................................................2201.002.00-------------1.00-----------------------------------------
.....................................GCTGCAATGCTGAGTACGTATCGTCC...........................................................................................................................................................................................2611.001.00---------------1.00---------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGATAAT..............................................................................................................................2201.003.00-----------1.00-------------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGG...................................................................................................................................1701.001.00--------------------------------1.00----------------------
............................................................................................................................................................CGAGCCCTCCGCTCCGACG...........................................................................191.000.00-----------------------------------1.00-------------------
................ATTCTCAATGCAAGATC.........................................................................................................................................................................................................................1711.001.00---------------------1.00---------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGAGG................................................................................................................................2001.001.00--------------1.00----------------------------------------
...................................................................................................................GAGGAGGCCGGGGTGTGAG....................................................................................................................191.000.00--------------------------------------1.00----------------
......................................................................................................CGAGGAGGAGGAGGAGGATAGA..............................................................................................................................2201.003.00---------------------------------1.00---------------------
...............................................TGAGTACGTATCGTCCACTC.......................................................................................................................................................................................2011.001.00-----1.00-------------------------------------------------
......................AATGCAAGATCCTCCGCTG.................................................................................................................................................................................................................1911.001.00-------------1.00-----------------------------------------
.........................................................................TTAGAGGTGGGGGTTCATCA.............................................................................................................................................................2011.001.00---------------1.00---------------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGTTA................................................................................................................................2001.001.00-1.00-----------------------------------------------------
......................................................................................................................................................................GCTCCTATGCGCTCTGCACTCGGC............................................................2411.001.001.00------------------------------------------------------
..............................................................................................................................................CTGGCGGCCTCTGTCGAGCCCTC.....................................................................................2311.001.00-------------------------------------------1.00-----------
..........................................................................................................................................................................................................CCTGCCGCGGGGACCCG...............................171.000.00----------------------------------------------1.00--------
.......................................................................................................................AGGCCGGGGTGGAGGGGTGTG..............................................................................................................211.000.00------------------1.00------------------------------------
...........................................................................................................................CGGGGTGGAGGGGTGGGTA............................................................................................................191.000.00------------------------------------------1.00------------
......................................................................................................CGAGGAGGAGGAGGAGGTTTT...............................................................................................................................2101.001.00-----------1.00-------------------------------------------
.......................................................................................................................................GTGGGCTCTGGCGGCCTCTGTCGAGC.........................................................................................2611.001.00-----------------------1.00-------------------------------
...................................................................................................CTTCGAGGAGGAGGAGGAGGA..................................................................................................................................2120.500.50--------------------------------------------------0.50----
.........................................................TCGTCCACTCTGAGC..................................................................................................................................................................................1520.500.50-----------------------0.50-------------------------------
......................................................................................................CGAGGAGGAGGAGGAGGAGGC...............................................................................................................................2130.330.330.33------------------------------------------------------
........................................................................................................AGGAGGAGGAGGAGGAGGCCG.............................................................................................................................2140.250.25------------0.25------------------------------------------
.........................................................................................................GGAGGAGGAGGAGGAGGCCG.............................................................................................................................2080.250.25------0.12-----------------------------------------------0.12
.........................................................................................................GGAGGAGGAGGAGGAGGCCGAGGA.........................................................................................................................2480.120.25------------------------0.12------------------------------

Antisense strand
CTTCTGTCTTTAGCTCATTCTCAATGCAAGATCCTCCGCTGCAATGCTGAGTACGTATCGTCCACTCTGAGCCTTAGAGGTGGGGGTTCATCAGGAGCACTTCGAGGAGGAGGAGGAGGAGGCCGGGGTGGAGGGGTGGGCTCTGGCGGCCTCTGTCGAGCCCTCCGCTCCTATGCGCTCTGCACTCGGCGCACCGCCCGCACCTGCCGCGGGGACCTCGCCTTCCATTCGGCGGTACATGGCATCGAAG
...................................................................................................((((.....))))..((.((..((((((..((((.((.((((((.(((((...))))))))))).)).))))..(((.....)))))))))...))..))...................................................
.................................................................................................98....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM532877(GSM532877)
G691N. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
...........................................................................................................................CGGGGTGGAGGGGTGGGCG............................................................................................................ 192.000.00--------------------1.00--------1.00-------------------------
...........................................................................................................................CGGGGTGGAGGGGTGGCGC............................................................................................................ 192.000.00---------------------------1.00-----------------1.00---------
..........................................................................................................................................................................................CGGCGCACCGCCCGCCG............................................... 171.000.00------------------------------------1.00------------------
...............................................................................................................................................................................................CGGCAGGTGCGGGCGGTG......................................... 1811.001.00----1.00--------------------------------------------------
..........................................................................................................................................................................................CGGCGCACCGCCCGCCGAG............................................. 191.000.00-----------------------------------------1.00-------------
.........................................................................................................GGAGGAGGAGGAGGAGGCCGGGGCTC....................................................................................................................... 261.000.00-------------------------------------1.00-----------------
...........................................................................................................................CGGGGTGGAGGGGTGGGCGT........................................................................................................... 201.000.00----------------1.00--------------------------------------
...........................................................................................................................CGGGGTGGAGGGGTGGCG............................................................................................................. 181.000.00-------------------------------1.00-----------------------
.............................................................................................................................................................................................CGCACCGCCCGCACCAGG........................................... 181.000.00----------------------------1.00--------------------------
.......................................................................................................................................................................................................................GAATGGAAGGCGAGG.................... 1550.400.40-----------------------------------------------------0.40-