ID: uc001emo.2_intron_3_0_chr1_145281705_f.5p
GENE: NOTCH2NL(4)
chr1:145281655-145281904+


(1)
AGO2.ip 		(1)
B-CELL 		(7)
BRAIN 		(9)
BREAST 		(25)
CELL-LINE 		(7)
CERVIX 		(4)
FIBROBLAST 		(4)
HEART 		(8)
LIVER 		(3)
OTHER 		(31)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CACCTGTCGGCAGACTGGTGACTTCACTTTTGAGTGCAACTGCCTTCCAGGTAAGGAGCTCCCTAGTGTCCCAGGATTAGGGGACAAACCCCTAGCACAGGAGGTAGTGGGTGTGGCTCAATTGCTTTTTTTAGGAAGCGCAAGGAAAAAGGGAAGTGAGAATTTTGTGTGGGGTGGGTTGCTAGTGAGGGAGGAGTTTTATGGGCCCACTGTGGTCCATAAACTGAGCAGGGGATAATTTAGCATGTCA
.....................................................(((.....)))..((((((........)))))).(((((..((((((((..............((((.((.((((((((............)))))))).)).))))..)))))))))))))...........................................................................
..................................................51............................................................................................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR029129(GSM416758)
SW480. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
.................................GTGCAACTGCCTTCCAG........................................................................................................................................................................................................1738.678.67-1.67---------------------0.330.67---------------------------0.330.670.67---------------------------0.330.330.330.33-0.330.330.330.330.330.330.330.330.33--------
..................................................GTAAGGAGCTCCCTAGTGTCATC.................................................................................................................................................................................237.000.00--7.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................GTGAGAATTTTGTGTGGG.............................................................................1826.506.50-6.50------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTGCT..............................................193.000.00-------------------1.00--------------------1.00------1.00--------------------------------------------------------
........GGCAGACTGGTGACTTCAC...............................................................................................................................................................................................................................1922.502.50---2.00-------------0.50--------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTGGCT..............................................192.000.00----------1.00-------------------------------1.00-------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTAGA..............................................192.000.002.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAAGGGAAGTGAGAATTT.....................................................................................1922.002.00------------2.00-------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTAC...............................................182.000.00-------------------------------1.00---------1.00--------------------------------------------------------------
................................AGTGCAACTGCCTTCCAGGTT.....................................................................................................................................................................................................212.000.00--------------2.00-----------------------------------------------------------------------------------------
........GGCAGACTGGTGACTTCACTTTTGA.........................................................................................................................................................................................................................2521.501.50----------------------1.50---------------------------------------------------------------------------------
........GGCAGACTGGTGACTTCACT..............................................................................................................................................................................................................................2021.501.50----0.50-1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ACTGAGCAGGGGATAATTTA........2021.501.50---------------------1.50----------------------------------------------------------------------------------
..................................TGCAACTGCCTTCCAG........................................................................................................................................................................................................1641.251.25------------------------------------------------------------------------------------------------0.250.250.25-0.250.25--
.......CGGCAGACTGGTGACTTCACT..............................................................................................................................................................................................................................2121.001.00------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTGAT...............................................181.000.00-----------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTCA...............................................181.000.00-------------------------1.00------------------------------------------------------------------------------
..........CAGACTGGTGACTTCACTTTTGAGTGC.....................................................................................................................................................................................................................2721.001.00--------------------------------------------0.50----------------------0.50------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTTAG..............................................191.000.001.00-------------------------------------------------------------------------------------------------------
.................................GTGCAACTGCCTTCCAGCAA.....................................................................................................................................................................................................2031.008.67---1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTAA...............................................181.000.00---1.00----------------------------------------------------------------------------------------------------
.................................................................................................CAGGAGGTAGTGGGTGTGG......................................................................................................................................1921.001.00------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTCGTG..............................................191.000.00----------------------------------1.00---------------------------------------------------------------------
.................................................................................................CAGGAGGTAGTGGGTGTGGCTTAAT................................................................................................................................2521.001.00----1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AGGGAGGAGTTTTATAGTT............................................191.000.00---------------1.00----------------------------------------------------------------------------------------
...........................................................TCCCTAGTGTCCCAGGATCACG.........................................................................................................................................................................221.000.00------------------------------1.00-------------------------------------------------------------------------
......................................................................................................GGTAGTGGGTGTGGCGGCG.................................................................................................................................191.000.00-------------1.00------------------------------------------------------------------------------------------
.......CGGCAGACTGGTGACTTCACTTT............................................................................................................................................................................................................................2321.001.00------0.50---------------------------------------------------------0.50---------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTGGT...............................................181.000.00---------------------------1.00----------------------------------------------------------------------------
.................................................................................................CAGGAGGTAGTGGGTGTG.......................................................................................................................................1821.001.00----0.50---------------------------------------------------------------------------0.50-----------------------
..................................................................................................................................TTAGGAAGCGCAAGGAAAAAGGGAAG..............................................................................................2611.001.00-----------------------1.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTAT...............................................181.000.00-----------1.00--------------------------------------------------------------------------------------------
...CTGTCGGCAGACTGGTG......................................................................................................................................................................................................................................1721.001.00--------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTACAG..............................................1941.000.251.00-------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTT................................................171.000.00--------1.00-----------------------------------------------------------------------------------------------
...................................................................................................GGAGGTAGTGGGTGTGGTTT...................................................................................................................................201.000.00--------------------------------------1.00-----------------------------------------------------------------
........GGCAGACTGGTGACTTCACTTTT...........................................................................................................................................................................................................................2321.001.00--------0.50--------0.50--------------------------------------------------------------------------------------
..........CAGACTGGTGACTTCACTTTTGAGTGCAACTG................................................................................................................................................................................................................3221.001.00---------------------------------------------1.00----------------------------------------------------------
...CTGTCGGCAGACTGGTGACTT..................................................................................................................................................................................................................................2121.001.00------------------------------------0.50------------------------0.50------------------------------------------
.................................................................................................CAGGAGGTAGTGGGTGTGGCT....................................................................................................................................2121.001.00----------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................GGAAGCGCAAGGAAAAAGGGAAGTGAG..........................................................................................2711.001.00----1.00---------------------------------------------------------------------------------------------------
......................................................................................AACCCCTAGCACAGGAACC.................................................................................................................................................191.000.00-----1.00--------------------------------------------------------------------------------------------------
................................................................................................ACAGGAGGTAGTGGGTGTGGCC....................................................................................................................................221.000.00-----1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................AAAAAGGGAAGTGAGAATTTTGTGTGGGGT...........................................................................3021.001.00---------1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................GCAAGGAAAAAGGGAAGTGAGAATT......................................................................................2511.001.00------------------------------------------------1.00-------------------------------------------------------
....................................................AAGGAGCTCCCTAGTGTCCCAGGAC.............................................................................................................................................................................251.000.00-----1.00--------------------------------------------------------------------------------------------------
................................AGTGCAACTGCCTTCCAGAAAC....................................................................................................................................................................................................2231.000.67--------------------------1.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTGA................................................171.000.00-------1.00------------------------------------------------------------------------------------------------
...CTGTCGGCAGACTGGTGAC....................................................................................................................................................................................................................................1921.001.00---0.50------------------------------------------------------------------------0.50---------------------------
............................................................................................................................................................................................................................AAACTGAGCAGGGGAAGCA...........191.000.00-----------------------------1.00--------------------------------------------------------------------------
.....................................AACTGCCTTCCAGGTGG....................................................................................................................................................................................................171.000.00-----1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................AGGAAGCGCAAGGAAAAAGGGAAGTG............................................................................................2611.001.00----------1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTACATG.............................................2041.000.25-------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTTT...............................................181.000.00---------------------------------1.00----------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTTGT..............................................191.000.00--------1.00-----------------------------------------------------------------------------------------------
.................................GTGCAACTGCCTTCCAA........................................................................................................................................................................................................171.000.00----------------------------------------------1.00---------------------------------------------------------
.................................................................................................................................................AAAAAGGGAAGTGAGAATTTTGTGTGGGG............................................................................2921.001.00---------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTTCGA..............................................191.000.001.00-------------------------------------------------------------------------------------------------------
................................AGTGCAACTGCCTTCCAG........................................................................................................................................................................................................1830.670.67---------------------------------------------------0.33----------------------------------0.33-----------------
.....GTCGGCAGACTGGTGACT...................................................................................................................................................................................................................................1820.500.50-----------------------------------------------------------------------------0.50--------------------------
......TCGGCAGACTGGTGACTTCACTTTTGA.........................................................................................................................................................................................................................2720.500.50---------------0.50----------------------------------------------------------------------------------------
..................TGACTTCACTTTTGAGTGCAACTGCCTTCC..........................................................................................................................................................................................................3020.500.50--------------------------------0.50-----------------------------------------------------------------------
..................................................GTAAGGAGCTCCCTAGTGTCCCAGGATTAGG.........................................................................................................................................................................3120.500.50--------------------------------------------------------------0.50-----------------------------------------
....................ACTTCACTTTTGAGTGCAACTG................................................................................................................................................................................................................2220.500.500.50-------------------------------------------------------------------------------------------------------
............................................................................................................................................................TGAGAATTTTGTGTGGG.............................................................................1720.500.50-------------------------------------------------0.50------------------------------------------------------
.........................................................................................................................................................AAGTGAGAATTTTGTGTGG..............................................................................1920.500.50-----------------------------------------------------------------0.50--------------------------------------
.......CGGCAGACTGGTGACTTCA................................................................................................................................................................................................................................1920.500.50----------------------------------------------------0.50---------------------------------------------------
..........................................................................................................................................................................................................................ATAAACTGAGCAGGGGAT..............1820.500.50-------0.50------------------------------------------------------------------------------------------------
.....GTCGGCAGACTGGTGAC....................................................................................................................................................................................................................................1720.500.50--------------------0.50-----------------------------------------------------------------------------------
......TCGGCAGACTGGTGACTTCACT..............................................................................................................................................................................................................................2220.500.50-------------------------------------0.50------------------------------------------------------------------
........GGCAGACTGGTGACTTC.................................................................................................................................................................................................................................1720.500.50----------------------------------------------------------------------0.50---------------------------------
..........................CTTTTGAGTGCAACTGCCTTC...........................................................................................................................................................................................................2120.500.50-------------------0.50------------------------------------------------------------------------------------
..............CTGGTGACTTCACTTTTGAG........................................................................................................................................................................................................................2020.500.50-------------------------------------------------0.50------------------------------------------------------
........GGCAGACTGGTGACTTCACTTTTG..........................................................................................................................................................................................................................2420.500.50------0.50-------------------------------------------------------------------------------------------------
...............................................CAGGTAAGGAGCTCCCTAGTGTC....................................................................................................................................................................................2320.500.50------------------------------------------------------------------------0.50-------------------------------
..CCTGTCGGCAGACTGGTGACTTCACTTTTGAGTG......................................................................................................................................................................................................................3420.500.50--------------------------------------------0.50-----------------------------------------------------------
............................................................................................................................................CAAGGAAAAAGGGAAGTGAGAATTTTGT..................................................................................2820.500.50--------------------------------0.50-----------------------------------------------------------------------
....TGTCGGCAGACTGGTGACTTC.................................................................................................................................................................................................................................2120.500.50-------------------------------------0.50------------------------------------------------------------------
...........................................................................................................................................................................................................................TAAACTGAGCAGGGGATAATTTAGCATGT..2920.500.50--------------------------------------------------------------------0.50-----------------------------------
.......CGGCAGACTGGTGACTTCAC...............................................................................................................................................................................................................................2020.500.50-----------------0.50--------------------------------------------------------------------------------------
........GGCAGACTGGTGACTTCACTTT............................................................................................................................................................................................................................2220.500.50----0.50---------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGAAAAAGGGAAGTGAGAATT......................................................................................2220.500.50-------0.50------------------------------------------------------------------------------------------------
.....................................................................................................................................................AGGGAAGTGAGAATTTTGTG.................................................................................2020.500.50---------------------------------------0.50----------------------------------------------------------------
..........CAGACTGGTGACTTCACTTTTGAGTGCAA...................................................................................................................................................................................................................2920.500.50------0.50-------------------------------------------------------------------------------------------------
......TCGGCAGACTGGTGACTTCA................................................................................................................................................................................................................................2020.500.50-----------------------------------------------------------------------0.50--------------------------------
..........CAGACTGGTGACTTCACTT.............................................................................................................................................................................................................................1920.500.50--------------------------------------------------0.50-----------------------------------------------------
......TCGGCAGACTGGTGACTTCAC...............................................................................................................................................................................................................................2120.500.50------------------------------------------------------------0.50-------------------------------------------
...........................................................................................CTAGCACAGGAGGTAG...............................................................................................................................................1620.500.50-----------------------------------------------------------0.50--------------------------------------------
.................................................................GTGTCCCAGGATTAGGGGA......................................................................................................................................................................1920.500.50--------------------------------------------------------------------------0.50-----------------------------
...............................................CAGGTAAGGAGCTCCCTAG........................................................................................................................................................................................1920.500.50------------------------0.50-------------------------------------------------------------------------------
....................ACTTCACTTTTGAGTGCAACTGCCTTCCAG........................................................................................................................................................................................................3020.500.50------------------------------------------------------------------0.50-------------------------------------
.............................................................................................................................................AAGGAAAAAGGGAAGTGAGAATT......................................................................................2320.500.50----0.50---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CACTGTGGTCCATAAACTGAGCAGGGGATA.............3020.500.50------------------0.50-------------------------------------------------------------------------------------
....TGTCGGCAGACTGGTGACTTCA................................................................................................................................................................................................................................2220.500.50--------0.50-----------------------------------------------------------------------------------------------
...................................................................................................GGAGGTAGTGGGTGTGGCTC...................................................................................................................................2020.500.50---------------------------------------------------------------------0.50----------------------------------
..................................................................................................................................................................TTTTGTGTGGGGTGGGTTGCTAGTG...............................................................2520.500.50---------------------------------------------------0.50----------------------------------------------------
....................................................................................................................................................................................................TTTTATGGGCCCACTGTG....................................1820.500.50------------------------------------0.50-------------------------------------------------------------------
..................................................................................................AGGAGGTAGTGGGTGTGGCTC...................................................................................................................................2120.500.50---------------------------------------------------------------0.50----------------------------------------
...........AGACTGGTGACTTCACTTTTGAGTGCAACTG................................................................................................................................................................................................................3120.500.50-------------------------------------------------------0.50------------------------------------------------
..................................................GTAAGGAGCTCCCTAGTGTCCCA.................................................................................................................................................................................2320.500.50--------------------------------------------------------0.50-----------------------------------------------
........GGCAGACTGGTGACTTCACTTTTGAG........................................................................................................................................................................................................................2620.500.50----0.50---------------------------------------------------------------------------------------------------
..................................................GTAAGGAGCTCCCTAGTGTCC...................................................................................................................................................................................2120.500.50---------------------------------------0.50----------------------------------------------------------------
......TCGGCAGACTGGTGACTT..................................................................................................................................................................................................................................1820.500.50-------------------------------------------------------------------------0.50------------------------------
......................TTCACTTTTGAGTGCAACTGC...............................................................................................................................................................................................................2120.500.50---------------------------------------------------------------------------0.50----------------------------
.....................................................................................................................................................AGGGAAGTGAGAATTTTGTGTGGGGTGGG........................................................................2920.500.50-------------------------------------------------------------------------------0.50------------------------
.............................TTGAGTGCAACTGCCTTCCAGGTAAGGA.................................................................................................................................................................................................2820.500.50------------------------------------------------------------------------------0.50-------------------------
........GGCAGACTGGTGACTTCA................................................................................................................................................................................................................................1820.500.50----------------0.50---------------------------------------------------------------------------------------
.............ACTGGTGACTTCACTTTTG..........................................................................................................................................................................................................................1920.500.50----------------------------------------------------------0.50---------------------------------------------
.........................................................................................................................................................................................TGAGGGAGGAGTTTTA.................................................1640.250.250.25-------------------------------------------------------------------------------------------------------
...............................................CAGGTAAGGAGCTCCC...........................................................................................................................................................................................1640.250.25---------------------------------------------------------------------------------------------------0.25----
................................................AGGTAAGGAGCTCCCT..........................................................................................................................................................................................1650.200.20------------------------------------------------------------------------------------------------------0.20-
...................................................................................................................................................................................TGCTAGTGAGGGAGGA.......................................................1650.200.20---------------------------------------------------------------------------------0.20----------------------
.................................................................................................CAGGAGGTAGTGGGTG.........................................................................................................................................1660.170.17-------------------------------------------------------------------------------------------------------0.17

Antisense strand
CACCTGTCGGCAGACTGGTGACTTCACTTTTGAGTGCAACTGCCTTCCAGGTAAGGAGCTCCCTAGTGTCCCAGGATTAGGGGACAAACCCCTAGCACAGGAGGTAGTGGGTGTGGCTCAATTGCTTTTTTTAGGAAGCGCAAGGAAAAAGGGAAGTGAGAATTTTGTGTGGGGTGGGTTGCTAGTGAGGGAGGAGTTTTATGGGCCCACTGTGGTCCATAAACTGAGCAGGGGATAATTTAGCATGTCA
.....................................................(((.....)))..((((((........)))))).(((((..((((((((..............((((.((.((((((((............)))))))).)).))))..)))))))))))))...........................................................................
..................................................51............................................................................................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		GSM532876(GSM532876)
G547T. (cervix)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR029129(GSM416758)
SW480. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
...................................................................................ACAAACCCCTAGCACAACAG................................................................................................................................................... 204.000.004.00-------------------------------------------------------------------------------------------------------
.....................................................AGGAGCTCCCTAGTGGG.................................................................................................................................................................................... 171.000.00----------------------------1.00---------------------------------------------------------------------------
...............................................................................................................................................................................................................................CTGAGCAGGGGATAACG.......... 171.000.00-------------1.00------------------------------------------------------------------------------------------
..................................................................................GACAAACCCCTAGCACATAG.................................................................................................................................................... 201.000.001.00-------------------------------------------------------------------------------------------------------
......TCGGCAGACTGGTGATT................................................................................................................................................................................................................................... 171.000.00-----------------------------------1.00--------------------------------------------------------------------
...................................................................................ACAAACCCCTAGCACAAGAT................................................................................................................................................... 201.000.001.00-------------------------------------------------------------------------------------------------------
...................................................................................ACAAACCCCTAGCACAAGAG................................................................................................................................................... 201.000.001.00-------------------------------------------------------------------------------------------------------
......................................................................................................................CAATTGCTTTTTTTAGT................................................................................................................... 171.000.00-------------------------------------------1.00------------------------------------------------------------
.................................................................................................................................................ATTCTCACTTCCCTTTTT....................................................................................... 1820.500.50--------------------------------------------------0.50-----------------------------------------------------
....................................................................................................................................................................................................................................CTAAATTATCCCCTG....... 1540.250.25---------------------------------------------------------------------------------0.25----------------------