uc001ehk.2_intron_4_0_chr1_118514671

TGCCTCATTATTTGCTGAGTTCCAAGCCTAAGTCTCAACCTCTTGCAAAGGTAAAACAAACATTGGAACAAATTCCCCACAGCCAATCAGCATTTGATGGAATTCTTTATTTTTTATTTTTTTCAATCCTGCTCCTTTTGTAGATTTTATGTAATTCTGATTCATTGAAGTTATTAGTTTCCGGCCACTGTGTACTGCTATTGACCGTATCTACCATCTCACCATGAAGCTCTTTAAACTTACATCTCAC ................................................................................................................................((((.......))))........................................................................................................... .....................................................................................................102........................................................161.......................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela)	SRR189782	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin)	SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR343334	SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver)	TAX577743(Rovira) total RNA. (breast)
..........................................................................................................TTATTTTTTATTTTTTTCATTAG.........................................................................................................................	23		24.00	0.00	7.00	8.00	2.00	6.00	-	-	-	-	-	-	1.00	-	-	-
........................................................................................................CTTTATTTTTTATTTTTTTCTAG...........................................................................................................................	23		9.00	0.00	2.00	3.00	3.00	1.00	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................TAGATTTTATGTAATTCTGATTCATTG...................................................................................	27	1	3.00	3.00	-	-	-	-	-	-	-	-	3.00	-	-	-	-	-
...........................................................................................................TATTTTTTATTTTTTTCACATT.........................................................................................................................	22		2.00	0.00	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................ATTCTTTATTTTTTATTTTTTAATT............................................................................................................................	25		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
.....................................................................................................ATTCTTTATTTTTTATTTTTTCAAC............................................................................................................................	25		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
.....................................................................................................ATTCTTTATTTTTTAACG...................................................................................................................................	18		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................GTAGATTTTATGTAAGCT.............................................................................................	18		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................TCTTTATTTTTTATTTTTTTCACTAG.........................................................................................................................	26		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TTCTTTATTTTTTATTTCAAG...............................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..CCTCATTATTTGCTGCTCT.....................................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
......................................................................................................TTCTTTATTTTTTATTTTTGGTG.............................................................................................................................	23		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.....................................................................................................................TTTTTTCAATCCTGCAATT..................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-
.........................................................................................................TTTATTTTTTATTTTTTTCATTAG.........................................................................................................................	24		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................TTTTTTATTTTTTTCAATTATG.......................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TTCTTTATTTTTTATTTTTGGTA.............................................................................................................................	23		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
......................................................................................................TTCTTTATTTTTTATTTCTAC...............................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................ATTCTTTATTTTTTATTTTTTAGTA............................................................................................................................	25		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
............................................................................................................ATTTTTTATTTTTTTCACTAG.........................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TTCTTTATTTTTTATTTTTTGGAG............................................................................................................................	24		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.........................................................................................................................................................ATTCTGATTCATTGAACT...............................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
......................................................................................................TTCTTTATTTTTTATTTTTTAC..............................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................ATTCTGATTCATTGAACTTA.............................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
.....................................................................................................ATTCTTTATTTTTTATTTTTTTAAG............................................................................................................................	25		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................TATTTTTTATTTTTTTCACCAG.........................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................TATTTTTTATTTTTTTCAAT...........................................................................................................................	20	6	0.17	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	0.17
..CCTCATTATTTGCTGA........................................................................................................................................................................................................................................	16	9	0.11	0.11	-	-	-	-	-	-	-	-	-	-	0.11	-	-	-

TGCCTCATTATTTGCTGAGTTCCAAGCCTAAGTCTCAACCTCTTGCAAAGGTAAAACAAACATTGGAACAAATTCCCCACAGCCAATCAGCATTTGATGGAATTCTTTATTTTTTATTTTTTTCAATCCTGCTCCTTTTGTAGATTTTATGTAATTCTGATTCATTGAAGTTATTAGTTTCCGGCCACTGTGTACTGCTATTGACCGTATCTACCATCTCACCATGAAGCTCTTTAAACTTACATCTCAC
................................................................................................................................((((.......))))...........................................................................................................
.....................................................................................................102........................................................161.......................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR189782

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR343334

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

TAX577743(Rovira)
total RNA. (breast)

..........................................................................................................TTATTTTTTATTTTTTTCATTAG.........................................................................................................................

24.00

0.00

7.00

8.00

2.00

6.00

1.00

........................................................................................................CTTTATTTTTTATTTTTTTCTAG...........................................................................................................................

9.00

0.00

2.00

3.00

1.00

............................................................................................................................................TAGATTTTATGTAATTCTGATTCATTG...................................................................................

3.00

...........................................................................................................TATTTTTTATTTTTTTCACATT.........................................................................................................................

2.00

0.00

2.00

.....................................................................................................ATTCTTTATTTTTTATTTTTTAATT............................................................................................................................

1.00

0.00

1.00

.....................................................................................................ATTCTTTATTTTTTATTTTTTCAAC............................................................................................................................

1.00

0.00

1.00

.....................................................................................................ATTCTTTATTTTTTAACG...................................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................GTAGATTTTATGTAAGCT.............................................................................................

1.00

0.00

1.00

.......................................................................................................TCTTTATTTTTTATTTTTTTCACTAG.........................................................................................................................

1.00

0.00

1.00

......................................................................................................TTCTTTATTTTTTATTTCAAG...............................................................................................................................

1.00

0.00

1.00

..CCTCATTATTTGCTGCTCT.....................................................................................................................................................................................................................................

1.00

0.00

1.00

......................................................................................................TTCTTTATTTTTTATTTTTGGTG.............................................................................................................................

1.00

0.00

1.00

.....................................................................................................................TTTTTTCAATCCTGCAATT..................................................................................................................

1.00

0.00

1.00

.........................................................................................................TTTATTTTTTATTTTTTTCATTAG.........................................................................................................................

1.00

0.00

1.00

.............................................................................................................TTTTTTATTTTTTTCAATTATG.......................................................................................................................

1.00

0.00

1.00

......................................................................................................TTCTTTATTTTTTATTTTTGGTA.............................................................................................................................

1.00

0.00

1.00

......................................................................................................TTCTTTATTTTTTATTTCTAC...............................................................................................................................

1.00

0.00

1.00

.....................................................................................................ATTCTTTATTTTTTATTTTTTAGTA............................................................................................................................

1.00

0.00

1.00

............................................................................................................ATTTTTTATTTTTTTCACTAG.........................................................................................................................

1.00

0.00

1.00

......................................................................................................TTCTTTATTTTTTATTTTTTGGAG............................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................ATTCTGATTCATTGAACT...............................................................................

1.00

0.00

1.00

......................................................................................................TTCTTTATTTTTTATTTTTTAC..............................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................ATTCTGATTCATTGAACTTA.............................................................................

1.00

0.00

1.00

.....................................................................................................ATTCTTTATTTTTTATTTTTTTAAG............................................................................................................................

1.00

0.00

1.00

...........................................................................................................TATTTTTTATTTTTTTCACCAG.........................................................................................................................

1.00

0.00

1.00

...........................................................................................................TATTTTTTATTTTTTTCAAT...........................................................................................................................

0.17

..CCTCATTATTTGCTGA........................................................................................................................................................................................................................................

0.11

TGCCTCATTATTTGCTGAGTTCCAAGCCTAAGTCTCAACCTCTTGCAAAGGTAAAACAAACATTGGAACAAATTCCCCACAGCCAATCAGCATTTGATGGAATTCTTTATTTTTTATTTTTTTCAATCCTGCTCCTTTTGTAGATTTTATGTAATTCTGATTCATTGAAGTTATTAGTTTCCGGCCACTGTGTACTGCTATTGACCGTATCTACCATCTCACCATGAAGCTCTTTAAACTTACATCTCAC ................................................................................................................................((((.......))))........................................................................................................... .....................................................................................................102........................................................161.......................................................................................	Size	Total Norm	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela)	SRR189782	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin)	SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR343334	SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver)	TAX577743(Rovira) total RNA. (breast)
................................TCTCAACCTCTTGCAGCG........................................................................................................................................................................................................	18	3.00	-	-	-	-	3.00	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................ATTCTGATTCATTGAAAG...............................................................................	18	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.........................................................................................................................................................................................CACTGTGTACTGCTACGTG..............................................	19	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..........................................................................CCCCACAGCCAATCAGGGG.............................................................................................................................................................	19	1.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-