ID: uc001efr.2_intron_22_0_chr1_115469185_f.3p
GENE: (23)
chr1:115486760-115487009+


(1)
BRAIN
(14)
BREAST
(4)
CELL-LINE
(4)
CERVIX
(2)
HEART
(1)
KIDNEY
(2)
LIVER
(3)
OTHER
(9)
SKIN
(1)
TESTES
(2)
UTERUS

Sense strand
AATACATATTTTAGGGGAGAAGATAGATTTTTTGAAAACAAAACACTTCTCACCATATGAAAATGTAAGGAAAGTGATCCAACCTAATTTCCATGAATAAGTAATCTTCTAAGATTCACAAAACCACAAAATGAATATGGAATGTTTTCAAGTAATCCATAGCATTTACTAATATTCATGCTATTTTTCTTTACTTAAAGGTCAATAAATTAGAGTTAGAACTAGAAAGTGCCAAACAGAAATTTGGAGA
..............................................................................................................................................................(((((((............)))))))..................................................................
.............................................................................................................................................142...............................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189785SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189783SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189786SRR553576(SRX182782)
source: Testis. (testes)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040043(GSM532928)
G428T. (cervix)
SRR040024(GSM532909)
G613N. (cervix)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
TAX577743(Rovira)
total RNA. (breast)
SRR343334SRR029128(GSM416757)
H520. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
TAX577740(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343335SRR040012(GSM532897)
G648N. (cervix)
SRR040042(GSM532927)
G428N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
..................................................................................................................................................TTCAAGTAATCCATAG........................................................................................16851.2551.2526.0015.505.88-1.88--0.12-0.12------------0.25-0.75-----0.38--0.12--0.25--------------
..................................................................................................................................................TTCAAGTAATCCATATAG......................................................................................1811.000.006.001.002.00-1.00--1.00-------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAGGCA.....................................................................................1984.1251.25---0.12-0.25--0.25--0.12----------0.380.25--0.120.500.250.12-0.120.25-0.120.25---0.12-0.120.120.120.120.12--0.120.12-
..................................................................................................................................................TTCAAGTAATCCATATGCT.....................................................................................193.000.00---1.00-1.00---------------1.00-----------------------------
..................................................................................................................................................TTCAAGTAATCCATATAGG.....................................................................................193.000.00-------1.00------1.001.00-----------------------------------
..................................................................................................................................................TTCAAGTAATCCATATGC......................................................................................183.000.00---2.00-----1.00-----------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAGGCAA....................................................................................2082.2551.25------1.00----------------0.25-0.620.12----0.25-------------------
..................................................................................................................................................TTCAAGTAATCCATAGGCTA....................................................................................2081.6251.25--------0.62-------------0.25-----0.120.12----0.12--0.12---------0.12--0.12
..................................................................................................................................................TTCAAGTAATCCATAGCCT.....................................................................................191.000.00--------1.00------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATATAA......................................................................................181.000.001.00--------------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAATAG.....................................................................................191.000.00------1.00--------------------------------------------
................................TGAAAACAAAACACTCTC........................................................................................................................................................................................................181.000.001.00--------------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAAGA......................................................................................181.000.00------------------1.00--------------------------------
..................................................................................................................................................TTCAAGTAATCCATAATAT.....................................................................................191.000.00-------------------1.00-------------------------------
..................................................................................................................................................TTCAAGTAATCCATAAA.......................................................................................171.000.00-----------------1.00---------------------------------
..................................................................................................................................................TTCAAGTAATCCATAAGG......................................................................................181.000.00-----------1.00---------------------------------------
..................................................................................................................................................TTCAAGTAATCCATATAGA.....................................................................................191.000.00-----1.00---------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATACAG......................................................................................181.000.001.00--------------------------------------------------
...................................................................................................................................................TCAAGTAATCCATAGGCAA....................................................................................191.000.00----------------1.00----------------------------------
................................TGAAAACAAAACACTCTCA.......................................................................................................................................................................................................191.000.001.00--------------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAAAA......................................................................................181.000.00--------------------1.00------------------------------
..................................................................................................................................................TTCAAGTAATCCATATGCA.....................................................................................191.000.00-------------1.00-------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAGGCG.....................................................................................1980.7551.25---0.12-0.12-----------------0.12-----0.12-------0.12--------0.12----
..................................................................................................................................................TTCAAGTAATCCATAGGCAT....................................................................................2080.3851.25-----------------------0.12--0.12-------------0.12----------
..................................................................................................................................................TTCAAGTAATCCATAGTCT.....................................................................................1980.2551.25--------------------------0.12------0.12-----------------
...........................................................................................................................................................................ATATTCATGCTATTTTT..............................................................1750.200.20----------0.20----------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAGACTA....................................................................................2080.1251.25--------0.12------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAGGGAA....................................................................................2080.1251.25------0.12--------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAGGCTC....................................................................................2080.1251.25-----------------------0.12---------------------------
..................................................................................................................................................TTCAAGTAATCCATAGTAT.....................................................................................1980.1251.25--------------------------------------0.12------------
..................................................................................................................................................TTCAAGTAATCCATAGGCC.....................................................................................1980.1251.25--------------------------0.12------------------------
..................................................................................................................................................TTCAAGTAATCCATAGGCTG....................................................................................2080.1251.25--------0.12------------------------------------------
..................................................................................................................................................TTCAAGTAATCCATAGGCAG....................................................................................2080.1251.25---------0.12-----------------------------------------

Antisense strand
AATACATATTTTAGGGGAGAAGATAGATTTTTTGAAAACAAAACACTTCTCACCATATGAAAATGTAAGGAAAGTGATCCAACCTAATTTCCATGAATAAGTAATCTTCTAAGATTCACAAAACCACAAAATGAATATGGAATGTTTTCAAGTAATCCATAGCATTTACTAATATTCATGCTATTTTTCTTTACTTAAAGGTCAATAAATTAGAGTTAGAACTAGAAAGTGCCAAACAGAAATTTGGAGA
..............................................................................................................................................................(((((((............)))))))..................................................................
.............................................................................................................................................142...............................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189785SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189783SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189786SRR553576(SRX182782)
source: Testis. (testes)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040043(GSM532928)
G428T. (cervix)
SRR040024(GSM532909)
G613N. (cervix)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
TAX577743(Rovira)
total RNA. (breast)
SRR343334SRR029128(GSM416757)
H520. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
TAX577740(Rovira)
total RNA. (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343335SRR040012(GSM532897)
G648N. (cervix)
SRR040042(GSM532927)
G428N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
....................................................................................................................................................................................................................................GTGCCAAACAGAAATTTAAA.. 201.000.00------------1.00--------------------------------------
....................................................................................................................................GAATATGGAATGTTTTTT.................................................................................................... 181.000.00----------1.00----------------------------------------
...............................................................................................................................................................................................................AGTTCTAACTCTAATT........................... 1640.250.250.25--------------------------------------------------