ID: uc001eez.2_intron_5_0_chr1_115090819_r.5p
GENE: (24)
chr1:115110535-115110784-


(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
AGO3.ip 		(4)
B-CELL 		(3)
BRAIN 		(8)
BREAST 		(22)
CELL-LINE 		(3)
CERVIX 		(6)
HEART 		(6)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(2)
OTHER 		(28)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GGCAAACAAAGAAAACATCCGGCAAGACTTCTGAAAAGACAATTTAGCAGGTAGAAGAAAAGTTGGGCTTTCACAAAAGGCATCTGAACTTTTAATGAACTTTGAAGGACAACAGCATCTTCCCAAAACCATTGATGTTTAAGTGTTTAGAAATCATAGAAGGTGTAGGCTGCTGTGGTAATTCTATTTGTATATCTCAACAGAATTAAAATGTCTAGCTTGGTGGTATTTTTATAGCCATAAAAGAAAA
..................................................((((((..((((.....))))..((...((((((((.((((((.((((..((((...((((..((((((..............))))))....))))))))..)))).)))))).)))).)))).))....))))))...............................................................
..................................................51.............................................................................................................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037937(GSM510475)
293cand2. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................GCTGTGGTAATTCTAGAGC............................................................1918.000.00--6.00----2.00-1.00------------1.00---1.00---1.00-1.00--1.00--1.00----------1.00--1.001.00--------------------------------------------
............................................................................................................................................................................CTGTGGTAATTCTATAGC............................................................1811.000.00------2.00------1.00---1.00-------1.00-------2.00--------1.00-----------1.00------------1.00--------------1.00---------------
.....ACAAAGAAAACATCCGGCAAGACT.............................................................................................................................................................................................................................2425.005.00------------------3.50----------------------1.50--------------------------------------------------------
...................................................TAGAAGAAAAGTTGGGCTTTCA.................................................................................................................................................................................2215.005.00-----------------------------1.00------1.00--1.00--------------------------1.00-----------1.00-------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGTGGT.......................................................................2214.004.00--------3.00-----------------------------------------------------------1.00-----------------------------
.............AACATCCGGCAAGACTTCTGAA.......................................................................................................................................................................................................................2223.503.50--3.50-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................GCTGTGGTAATTCTAGAG.............................................................183.000.00--2.00--------------------------------------------------------------1.00--------------------------------
...........................................................................................................................................................ATAGAAGGTGTAGGCTGCT............................................................................1913.003.00-3.00------------------------------------------------------------------------------------------------
........AAGAAAACATCCGGCAAG................................................................................................................................................................................................................................1822.502.500.50----2.00--------------------------------------------------------------------------------------------
.............................................................................................AATGAACTTTGAAGGCCG...........................................................................................................................................182.000.00----------------------------2.00---------------------------------------------------------------------
...............................................................................................................................................TGTTTAGAAATCATAGAAGGTGT....................................................................................2312.002.00---2.00----------------------------------------------------------------------------------------------
.......................................................AGAAAAGTTGGGCTTTCA.................................................................................................................................................................................1812.002.00--------1.00----------------------------------------------------------------------------1.00------------
..................................................GTAGAAGAAAAGTTGGGCTTTCACAAAAGGCATCTGAACTTTTAATGAACTTTGAAGGACAACAGCATC...................................................................................................................................6912.002.00---------------2.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................AAAATGTCTAGCTTGGTGGTATT....................2312.002.00-----2.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................ATAGAAGGTGTAGGCTGCTG...........................................................................2012.002.00------------2.00-------------------------------------------------------------------------------------
..........................................................................................TTTAATGAACTTTGAAGGACA...........................................................................................................................................2112.002.00-------------------1.00------------1.00-----------------------------------------------------------------
...............CATCCGGCAAGACTTCTGAAAAGACAA................................................................................................................................................................................................................2722.002.00--------------------2.00-----------------------------------------------------------------------------
.............................TCTGAAAAGACAATTTAGCAGGTAGAAGAAA..............................................................................................................................................................................................3112.002.00------2.00-------------------------------------------------------------------------------------------
..........................................................................................TTTAATGAACTTTGAAGGACAACA........................................................................................................................................2412.002.00-------------------2.00------------------------------------------------------------------------------
.........................................................................................................AGGACAACAGCATCTTCCC..............................................................................................................................1912.002.00------------2.00-------------------------------------------------------------------------------------
.....................................................................................................................................................GAAATCATAGAAGGTGTAGGCTGCT............................................................................2512.002.00---2.00----------------------------------------------------------------------------------------------
......................................................................................................................................................AAATCATAGAAGGTGTAGGCTGCT............................................................................2412.002.00---------------------1.00------------1.00---------------------------------------------------------------
..........................................................................AAAAGGCATCTGAACTCTG.............................................................................................................................................................192.000.00------------------------------------------------------------1.00----------------------1.00--------------
............................................................................................TAATGAACTTTGAAGGACAACAGC......................................................................................................................................2412.002.00----------------2.00---------------------------------------------------------------------------------
....AACAAAGAAAACATCCGGCAAGACTTCTGAAAAGACAATTTAGCAGGTAGAAGAAAAGTTGGGCTTTCACAAAAGGCATCTGAACTTTTAA...........................................................................................................................................................9112.002.00---------------2.00----------------------------------------------------------------------------------
...................CGGCAAGACTTCTGAAAAGACAATTTAGCAGGT......................................................................................................................................................................................................3312.002.00-2.00------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................ATGTCTAGCTTGGTGGTATTTTTATAGCC...........2912.002.00-----------2.00--------------------------------------------------------------------------------------
................................................AGGTAGAAGAAAAGTTGGGCTTTT..................................................................................................................................................................................242.000.00-----------------------2.00--------------------------------------------------------------------------
..............................................................................................................................................................GAAGGTGTAGGCTGCTG...........................................................................1712.002.00-1.00-------1.00----------------------------------------------------------------------------------------
.................................................................................................................................................TTTAGAAATCATAGAAGGTGTAG..................................................................................2312.002.00-----------------2.00--------------------------------------------------------------------------------
................ATCCGGCAAGACTTCTGAAAAGACA.................................................................................................................................................................................................................2521.501.50-----1.00-------------------0.50------------------------------------------------------------------------
.........................................ATTTAGCAGGTAGAAGAAAAGTTGGGCTTTCA.................................................................................................................................................................................3211.001.00-1.00------------------------------------------------------------------------------------------------
.......................................................................................................................................................................GGCTGCTGTGGTAATTCTATTTGTATATCTC....................................................3111.001.00-------------------------------------------------------------1.00------------------------------------
...........................................................AAGTTGGGCTTTCACAAAAGGCATA......................................................................................................................................................................251.000.001.00-------------------------------------------------------------------------------------------------
................................................................................................................................................GTTTAGAAATCATAGAAGGTGT....................................................................................2211.001.00--------------------------------------------------1.00-----------------------------------------------
.......................................................................................................................................................AATCATAGAAGGTGTAGGCTGCTG...........................................................................2411.001.00-------------------------------1.00------------------------------------------------------------------
............AAACATCCGGCAAGACTTCTG.........................................................................................................................................................................................................................2121.001.00-----------------0.50---------------------0.50----------------------------------------------------------
.........AGAAAACATCCGGCAAGACTTCTGAAAAGACAATTTAGCAGGTAGAAGAAAAGTTGGGCTTT...................................................................................................................................................................................6211.001.00--------------------------------------------------------------------------1.00-----------------------
......................................................................................................................................................................AGGCTGCTGTGGTAATTCTAT...............................................................2111.001.00----1.00---------------------------------------------------------------------------------------------
..............................................................................GGCATCTGAACTTTTAATGAACTTTGAAGGACAACAGCATCTTCCCAAAACCATTGATGTTTAAGTGTTTAGAAATCATAGAAGGTGTA...................................................................................8911.001.00---------------------------------------------------------------------------------1.00----------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTG...........................................................................1811.001.00-------1.00------------------------------------------------------------------------------------------
..........................................................................................TTTAATGAACTTTGAAGGACAACAGC......................................................................................................................................2611.001.00-----------------------------------------------1.00--------------------------------------------------
........AAGAAAACATCCGGCAAGACTCCTG.........................................................................................................................................................................................................................251.000.00----1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................TAGAAGGTGTAGGCTGCTGTGGTAATTC..................................................................2811.001.001.00-------------------------------------------------------------------------------------------------
...................................................TAGAAGAAAAGTTGGGCTTTCACA...............................................................................................................................................................................2411.001.00------------------------------------1.00-------------------------------------------------------------
....................................................................TTTCACAAAAGGCATCTGAAC.................................................................................................................................................................2111.001.00-----------------------------------------------------------1.00--------------------------------------
.............................................................................AGGCATCTGAACTTTTAATGAACTGTGA.................................................................................................................................................281.000.00---------1.00----------------------------------------------------------------------------------------
............................................................................................................................................................TAGAAGGTGTAGGCTGCTGTGT........................................................................221.000.00---1.00----------------------------------------------------------------------------------------------
.........AGAAAACATCCGGCAAGACTTCT..........................................................................................................................................................................................................................2321.001.00-----0.50----------------------------------0.50---------------------------------------------------------
......................................................AAGAAAAGTTGGGCTTTCA.................................................................................................................................................................................1911.001.00---------------------------1.00----------------------------------------------------------------------
...............................................................................................................................................................AAGGTGTAGGCTGCTGTGGG.......................................................................201.000.00---------1.00----------------------------------------------------------------------------------------
.............................................AGCAGGTAGAAGAAAAGTTGGGCTTT...................................................................................................................................................................................2611.001.00---1.00----------------------------------------------------------------------------------------------
..............................................................................................ATGAACTTTGAAGGACAACAGCATCTTCCC..............................................................................................................................3011.001.001.00-------------------------------------------------------------------------------------------------
.............................TCTGAAAAGACAATTTAGCAGGTAGAAG.................................................................................................................................................................................................2811.001.00----------1.00---------------------------------------------------------------------------------------
...........................................................................AAAGGCATCTGAACTTTTAATGAAC......................................................................................................................................................2521.001.000.50---------0.50---------------------------------------------------------------------------------------
...................................................................................CTGAACTTTTAATGAACTTTGAAG...............................................................................................................................................2411.001.00-------------------------1.00------------------------------------------------------------------------
.........................................................................................................................................................TCATAGAAGGTGTAGGCTGCTGCGG........................................................................251.000.00-----------1.00--------------------------------------------------------------------------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGCGG........................................................................2111.001.00----1.00---------------------------------------------------------------------------------------------
............................................................................AAGGCATCTGAACTTTTAATGAACT.....................................................................................................................................................2521.001.00-----0.50-----------------0.50--------------------------------------------------------------------------
.......................................CAATTTAGCAGGTAGAAGAAAAGTTGGGCTTT...................................................................................................................................................................................3211.001.00-1.00------------------------------------------------------------------------------------------------
....................GGCAAGACTTCTGAAAAGACAATTTAGCAGG.......................................................................................................................................................................................................3111.001.00----------------------------------1.00---------------------------------------------------------------
.............................................................................................................................................AGTGTTTAGAAATCATAGAAGGTGTAGG.................................................................................2811.001.00-1.00------------------------------------------------------------------------------------------------
.............................................AGCAGGTAGAAGAAAAGT...........................................................................................................................................................................................1811.001.001.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................CTGTGGTAATTCTATAGCT...........................................................191.000.00-------------------------------------------------------1.00------------------------------------------
...........AAAACATCCGGCAAGACTTCTGAAAAGAC..................................................................................................................................................................................................................2921.001.00--------------------1.00-----------------------------------------------------------------------------
.......AAAGAAAACATCCGGCAAGACTCCTG.........................................................................................................................................................................................................................261.000.00----------------------------------------------1.00---------------------------------------------------
.....................................................................................................TTGAAGGACAACAGCATCTTCCCA.............................................................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................TGTAGGCTGCTGTGGTA......................................................................1711.001.00---------------------------------------------------------1.00----------------------------------------
..CAAACAAAGAAAACATCCGGCAAGAC..............................................................................................................................................................................................................................2621.001.00---------------------------------------------------1.00----------------------------------------------
......................................................................................................................................................AAATCATAGAAGGTGTAGGCTG..............................................................................2211.001.00----------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................AGGCTGCTGTGGTAATTCTATTTGTA..........................................................2611.001.00-1.00------------------------------------------------------------------------------------------------
.......................................................AGAAAAGTTGGGCTTTCACAAAAGGCAT.......................................................................................................................................................................2811.001.00-------1.00------------------------------------------------------------------------------------------
................................................................GGGCTTTCACAAAAGGCATA......................................................................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------
.............................................AGCAGGTAGAAGAAAAGTT..........................................................................................................................................................................................1911.001.00---------------------------1.00----------------------------------------------------------------------
.........................................ATTTAGCAGGTAGAAGAAAAGTTGGGCTTCC..................................................................................................................................................................................311.000.00----1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................CTGTGGTAATTCTATAG.............................................................171.000.00---------------------------------------------------------------------------1.00----------------------
............................................................................................................................................................TAGAAGGTGTAGGCTGCTGTGGTAATTT..................................................................281.000.001.00-------------------------------------------------------------------------------------------------
..................CCGGCAAGACTTCTGAAAAGACAATTTAGC..........................................................................................................................................................................................................3011.001.00--------------------------1.00-----------------------------------------------------------------------
.............................................................................................AATGAACTTTGAAGGCCGA..........................................................................................................................................191.000.00-------------------------------------1.00------------------------------------------------------------
....................................................................................................................................................................GTAGGCTGCTGTGGTAATTCTATTTGT...........................................................2711.001.00-------------------------------------------------------------------------1.00------------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGTGGTAAAGC..................................................................2711.001.00----1.00---------------------------------------------------------------------------------------------
.....................................................GAAGAAAAGTTGGGCTTTCACAAA.............................................................................................................................................................................2411.001.00----------------------1.00---------------------------------------------------------------------------
.........................................................................................................AGGACAACAGCATCTTCCCAAA...........................................................................................................................2211.001.00----1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................TGTTTAGAAATCATAGAAGGTGTAGG.................................................................................2611.001.00-----------------------------------------------------------------------1.00--------------------------
.............................................................................................................................................................................TGTGGTAATTCTATTGCTA..........................................................191.000.00--------------------------------------------------------------------------------------1.00-----------
...................................................................................................................................................TAGAAATCATAGAAGGTGTAGGCTGT.............................................................................2611.001.00---1.00----------------------------------------------------------------------------------------------
......................CAAGACTTCTGAAAAAAAA.................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------1.00-------------
....................................................AGAAGAAAAGTTGGGCTTTC..................................................................................................................................................................................2011.001.00--------1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................ACAGAATTAAAATGTCTAGCTTGGTGG........................2711.001.00---------------------1.00----------------------------------------------------------------------------
.....................................................................................................TTGAAGGACAACAGCATCTT.................................................................................................................................2011.001.00-----1.00--------------------------------------------------------------------------------------------
................................................................................................................................................................AGGTGTAGGCTGCTGTGGTAATTCT.................................................................2511.001.00---------1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGTGGTAATT...................................................................2611.001.00------------------------------------------------1.00-------------------------------------------------
..................................................................................................................GCATCTTCCCAAAACCATC.....................................................................................................................191.000.00----------------------------------------------------------------------------1.00---------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGTGGTAA.....................................................................2411.001.001.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGTGGTA......................................................................2311.001.00--------------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................ATCATAGAAGGTGTACGCT...............................................................................191.000.00------------------------------------------------------------------------1.00-------------------------
.......................................................AGAAAAGTTGGGCTTTCACAAAAGGCA........................................................................................................................................................................2711.001.00-------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................CATAGAAGGTGTAGGCTGC.............................................................................1921.001.00-1.00------------------------------------------------------------------------------------------------
.....................................................................TTCACAAAAGGCATCTGAACTTTTAATGA........................................................................................................................................................2911.001.00------------------------------1.00-------------------------------------------------------------------
................................................................................................................................................................AGGTGTAGGCTGCTGTGGTAATTCTATCTGT...........................................................311.000.00-----------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................GAAATCATAGAAGGTGTAGG.................................................................................2011.001.00-----------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................................................................................AATGTCTAGCTTGGTGGTATTTTTATAGCCA..........3111.001.00-------------------------------------1.00------------------------------------------------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGTGGTAACCC..................................................................2711.001.00----1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................GGTGTAGGCTGCTGTGGT.......................................................................1811.001.00-------------------------------------------1.00------------------------------------------------------
......................................................................................................................................ATGTTTAAGTGTTTATCC..................................................................................................181.000.00--------------------------------------------------------1.00-----------------------------------------
.............................................................................................AATGAACTTTGAAGGACAACAGCATCT..................................................................................................................................2711.001.00----------1.00---------------------------------------------------------------------------------------
............................................................................................................................................................TAGAAGGTGTAGGCTGCT............................................................................1811.001.00----------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................................................................................................TCTAGCTTGGTGGTATTTTTATAGCCAT.........2811.001.00------------------------1.00-------------------------------------------------------------------------
...................................................................................................................................................TAGAAATCATAGAAGGTGTAGGCTG..............................................................................2511.001.00---1.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCTTGGTGGTATTTTTAT...............1911.001.00-----1.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTAGCTTGGTGGTATTTTTATAGC............2411.001.001.00-------------------------------------------------------------------------------------------------
.............................................AGCAGGTAGAAGAAAAGTTGGGCTTTCA.................................................................................................................................................................................2811.001.00-----------------------------------------------------------------------------1.00--------------------
...................................................TAGAAGAAAAGTTGGGCTTTCAC................................................................................................................................................................................2311.001.00--------------------------------------------------------------1.00-----------------------------------
.............................................................................................AATGAACTTTGAAGGACAACAGCA.....................................................................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------
.......................................................................................................GAAGGACAACAGCATCTTAA...............................................................................................................................201.000.00-------------------------------------------------------------------------------1.00------------------
..........................................TTTAGCAGGTAGAAGAAAAGTTGG........................................................................................................................................................................................2411.001.00------------------------1.00-------------------------------------------------------------------------
............................................TAGCAGGTAGAAGAAAAGTTGGGCT.....................................................................................................................................................................................2511.001.00--------------------------------------------------------------------------------1.00-----------------
..........................................................................................................................................................CATAGAAGGTGTAGGCTGCTGT..........................................................................2211.001.00-1.00------------------------------------------------------------------------------------------------
..................................................................................................................................................TTAGAAATCATAGAAGGTGTAGGCTGCTG...........................................................................2911.001.00-1.00------------------------------------------------------------------------------------------------
.......................................................................................................................................................AATCATAGAAGGTGTAGGCT...............................................................................2011.001.00---------------------------------------------------------------1.00----------------------------------
...................CGGCAAGACTTCTGAAAAGACAATTTAGCAGGTAGA...................................................................................................................................................................................................3611.001.00-1.00------------------------------------------------------------------------------------------------
...................................................TAGAAGAAAAGTTGGGCTTTCACAAAAGGC.........................................................................................................................................................................3011.001.00-------------1.00------------------------------------------------------------------------------------
....AACAAAGAAAACATCCGGCAAGACTTCCGCA.......................................................................................................................................................................................................................311.000.00----1.00---------------------------------------------------------------------------------------------
...............................................................TGGGCTTTCACAAAAGGCA........................................................................................................................................................................1911.001.00----------------------------------------------------------1.00---------------------------------------
......................CAAGACTTCTGAAAAGACAATTTAGCAG........................................................................................................................................................................................................2811.001.00------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................AGAAGGTGTAGGCTGCTGTGGTAAT....................................................................2511.001.00----------------1.00---------------------------------------------------------------------------------
..............................CTGAAAAGACAATTTAGCAGGTAG....................................................................................................................................................................................................2411.001.00-1.00------------------------------------------------------------------------------------------------
.........................................ATTTAGCAGGTAGAAGAAAAGTTGGG.......................................................................................................................................................................................2611.001.001.00-------------------------------------------------------------------------------------------------
..............................................................................................ATGAACTTTGAAGGACAACAGCATCTT.................................................................................................................................2711.001.001.00-------------------------------------------------------------------------------------------------
...................................................TAGAAGAAAAGTTGGGCTTTC..................................................................................................................................................................................2111.001.00----------------1.00---------------------------------------------------------------------------------
.................................................................................................................................................TTTAGAAATCATAGAAGGTGTAGGCT...............................................................................2611.001.001.00-------------------------------------------------------------------------------------------------
..............................................................................................................AACAGCATCTTCCCAAAAC.........................................................................................................................1911.001.00---------------------------------------------1.00----------------------------------------------------
...........................................................................AAAGGCATCTGAACTTTTAATGAA.......................................................................................................................................................2420.500.50------------------------0.50-------------------------------------------------------------------------
.........................................................................................................AGGACAACAGCATCTTCC...............................................................................................................................1820.500.50--------------------------------------0.50-----------------------------------------------------------
....AACAAAGAAAACATCCGGCAAGACTTCTGAA.......................................................................................................................................................................................................................3120.500.50-------------------------------------------0.50------------------------------------------------------
..........................................................................AAAAGGCATCTGAACTTTT.............................................................................................................................................................1920.500.50----------------------------------------------------------------0.50---------------------------------
...AAACAAAGAAAACATCCGGCAAGAC..............................................................................................................................................................................................................................2520.500.50----------------------------------------------------------------------------------------0.50---------
..................CCGGCAAGACTTCTGAAAAGACA.................................................................................................................................................................................................................2320.500.50----------------------0.50---------------------------------------------------------------------------
..................CCGGCAAGACTTCTGAAAAG....................................................................................................................................................................................................................2020.500.50---------------------0.50----------------------------------------------------------------------------
....................................................................................................................................................AGAAATCATAGAAGGTGT....................................................................................1820.500.500.50-------------------------------------------------------------------------------------------------
.................TCCGGCAAGACTTCTGAA.......................................................................................................................................................................................................................1820.500.50-------------0.50------------------------------------------------------------------------------------
.........AGAAAACATCCGGCAAGACTTCTGAAA......................................................................................................................................................................................................................2720.500.50------------------------------------------------------------------------------------------0.50-------
.................TCCGGCAAGACTTCTGAAAAGACAATT..............................................................................................................................................................................................................2720.500.50--------------------------------------------0.50-----------------------------------------------------
.................TCCGGCAAGACTTCTGA........................................................................................................................................................................................................................1720.500.50-------0.50------------------------------------------------------------------------------------------
........................................................................................................AAGGACAACAGCATCTTC................................................................................................................................1820.500.50-------------------------------------------------------------------------------------------0.50------
.................TCCGGCAAGACTTCTGAAAAGAC..................................................................................................................................................................................................................2320.500.500.50-------------------------------------------------------------------------------------------------
..........GAAAACATCCGGCAAGACTTCTGAAA......................................................................................................................................................................................................................2620.500.50----------0.50---------------------------------------------------------------------------------------
..............ACATCCGGCAAGACTTCTGAAA......................................................................................................................................................................................................................2220.500.50-----------------------------------------------------------------------------------------0.50--------
..............ACATCCGGCAAGACTTC...........................................................................................................................................................................................................................1720.500.50---------------------0.50----------------------------------------------------------------------------
.................TCCGGCAAGACTTCTGAAAA.....................................................................................................................................................................................................................2020.500.50-----------------------------0.50--------------------------------------------------------------------
........AAGAAAACATCCGGCAAGACTTC...........................................................................................................................................................................................................................2320.500.50--------------------------------------------------------------------------------------------0.50-----
...................CGGCAAGACTTCTGA........................................................................................................................................................................................................................1520.500.50------------------------------------------0.50-------------------------------------------------------
.........AGAAAACATCCGGCAAGACTTCTGAAAAGAC..................................................................................................................................................................................................................3120.500.50-------------0.50------------------------------------------------------------------------------------
...........AAAACATCCGGCAAGACTTCTGAAAA.....................................................................................................................................................................................................................2620.500.50----------0.50---------------------------------------------------------------------------------------
..CAAACAAAGAAAACATCCGGCAAGACTTCTG.........................................................................................................................................................................................................................3120.500.50-------------0.50------------------------------------------------------------------------------------
..............ACATCCGGCAAGACTTCTGAAAAGACA.................................................................................................................................................................................................................2720.500.50-------------0.50------------------------------------------------------------------------------------
.......AAAGAAAACATCCGGCAAG................................................................................................................................................................................................................................1920.500.500.50-------------------------------------------------------------------------------------------------
..................CCGGCAAGACTTCTGA........................................................................................................................................................................................................................1620.500.50-----------------------------0.50--------------------------------------------------------------------
........................................................................................................AAGGACAACAGCATCTTCC...............................................................................................................................1920.500.500.50-------------------------------------------------------------------------------------------------
............AAACATCCGGCAAGACTTCTGAAAAG....................................................................................................................................................................................................................2620.500.50-----------------------------------------------------------------------------------------------0.50--
...........................................................................................................................................................................................................AATTAAAATGTCTAGCTTGGTG.........................2220.500.500.50-------------------------------------------------------------------------------------------------
........................................AATTTAGCAGGTAGAAG.................................................................................................................................................................................................1720.500.50----------0.50---------------------------------------------------------------------------------------
...........................................................................................................................................................ATAGAAGGTGTAGGCTG..............................................................................1720.500.50----------------------------------------------------------------------------------------------0.50---
........................................................................ACAAAAGGCATCTGAACTT...............................................................................................................................................................1920.500.50----------------------------------------------------------------0.50---------------------------------
...................CGGCAAGACTTCTGAAAAGAC..................................................................................................................................................................................................................2120.500.50---------------------------------------------------------------------------------------------0.50----
............AAACATCCGGCAAGACTTCTGAA.......................................................................................................................................................................................................................2320.500.50-0.50------------------------------------------------------------------------------------------------
.........................................................................CAAAAGGCATCTGAACT................................................................................................................................................................1720.500.50----------0.50---------------------------------------------------------------------------------------
.........AGAAAACATCCGGCAAGACTTCTGA........................................................................................................................................................................................................................2520.500.50---0.50----------------------------------------------------------------------------------------------
....................................................AGAAGAAAAGTTGGGCTT....................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------0.50-
..................CCGGCAAGACTTCTG.........................................................................................................................................................................................................................1530.330.33------0.33-------------------------------------------------------------------------------------------
......................CAAGACTTCTGAAAAGACA.................................................................................................................................................................................................................1930.330.33-------------------------------------------------------------------------------------------------0.33
.....................GCAAGACTTCTGAAAAG....................................................................................................................................................................................................................1740.250.25------0.25-------------------------------------------------------------------------------------------
.........................................................................CAAAAGGCATCTGAAC.................................................................................................................................................................1640.250.25----------0.25---------------------------------------------------------------------------------------
............................................................AGTTGGGCTTTCACA...............................................................................................................................................................................1580.250.25-----------0.12----------------------------------0.12---------------------------------------------------
...............................................................................GCATCTGAACTTTTAATG.........................................................................................................................................................1860.170.17---------------------------------------------0.17----------------------------------------------------

Antisense strand
GGCAAACAAAGAAAACATCCGGCAAGACTTCTGAAAAGACAATTTAGCAGGTAGAAGAAAAGTTGGGCTTTCACAAAAGGCATCTGAACTTTTAATGAACTTTGAAGGACAACAGCATCTTCCCAAAACCATTGATGTTTAAGTGTTTAGAAATCATAGAAGGTGTAGGCTGCTGTGGTAATTCTATTTGTATATCTCAACAGAATTAAAATGTCTAGCTTGGTGGTATTTTTATAGCCATAAAAGAAAA
..................................................((((((..((((.....))))..((...((((((((.((((((.((((..((((...((((..((((((..............))))))....))))))))..)))).)))))).)))).)))).))....))))))...............................................................
..................................................51.............................................................................................................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037937(GSM510475)
293cand2. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
............AGTCTTGCCGGATGTTT............................................................................................................................................................................................................................. 1721.001.00---------------------------------------------------------------------1.00----------------------------
.................................................................................................................................................................................................................................GTATTTTTATAGCCATTTA...... 191.000.00--------------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................AAGGTGTAGGCTGCTGTGGGC...................................................................... 211.000.00---------------------------------------------------------------------------------------1.00----------
...............................................................................................................................................................................TGGTAATTCTATTTGTATTAA...................................................... 211.000.00-------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................................................................GTATTTTTATAGCCATTT....... 181.000.00--------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GTATTTTTATAGCCATTTT...... 191.000.00--------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GTATTTTTATAGCCATCTT...... 191.000.00--------------1.00-----------------------------------------------------------------------------------