ID: uc001eez.2_intron_17_0_chr1_115141919_r.3p
GENE: (12)
chr1:115141869-115142118-


(1)
AGO2.ip
(2)
BRAIN
(2)
BREAST
(4)
CELL-LINE
(2)
CERVIX
(2)
HEART
(2)
LIVER
(2)
OTHER
(26)
SKIN
(1)
XRN.ip

Sense strand
TTATGTTACTCTATATATGACACCATTTGTTTTCTCCTCTGGCTAGCACCCTGTCAAAATGTGGCCATGCTGTGGTAGCTACACTGTATCCGTTCACCTGGCAGCATACCTATATCCCAGTCCTGCCAGCATCTATGATTGACATCGTGTGCTCACCTACACCATTCCTTATTGGAATCCTGTCTTGCTCCTTACCACAGCTCCAGGACCTACCCATTGAAGAGGTGAGATAGAAGAATGGAACCTAATA
...................................................((((((..((((((..(((....))))))))).......(((....(((((((.((............)).))))))).....))).))))))..........................................................................................................
..................................................51............................................................................................145.......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189783SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................CCAGTCCTGCCAGCATCTATGATTG.............................................................................................................25128.0028.006.003.00-4.001.00-3.00-1.002.00--1.001.00--1.00----1.00----1.001.00-1.00-----------1.00
.........................................................................................................................CCTGCCAGCATCTATGATTG.............................................................................................................2016.006.001.00---2.00---------1.00--1.001.00-----------------------
.....................................................................................................................CAGTCCTGCCAGCATCTATGATTG.............................................................................................................2415.005.00----1.00---1.00-1.00-----------------------1.00--1.00----
..........................................................................................................................CTGCCAGCATCTATGATTG.............................................................................................................1913.003.00-1.00--------1.00----1.00--------------------------
.....................................................................................................................................................................................................CAGCTCCAGGACCTACCCATTGAAGAG..........................2712.002.00-----------1.00---------------------1.00--------
......................................................................................................................AGTCCTGCCAGCATCTATGATTG.............................................................................................................2312.002.00-----------1.00------------1.00-----------------
...........................................TAGCACCCTGTCAAATCAG............................................................................................................................................................................................192.000.00--2.00---------------------------------------
...............................................................................................................................AGCATCTATGATTGACATC........................................................................................................1911.001.00------------------------------1.00-----------
..................................................................................................................TCCCAGTCCTGCCAGCATCTATGATTG.............................................................................................................2711.001.00-------------------1.00----------------------
.................................................................................................CTGGCAGCATACCTATATTCCA...................................................................................................................................221.000.00--1.00---------------------------------------
.......................................................AAAATGTGGCCATGCTGTGGTAGCT..........................................................................................................................................................................2511.001.00-------------------------------1.00----------
.............................................................................................................................CCAGCATCTATGATTG.............................................................................................................1611.001.00------------1.00-----------------------------
........................................................................................................................TCCTGCCAGCATCTATGATTG.............................................................................................................2111.001.001.00-----------------------------------------
........................................................................................................................................GATTGACATCGTGTGCTCA...............................................................................................1911.001.00-------1.00----------------------------------
...........................................................................................................................TGCCAGCATCTATGATTG.............................................................................................................1811.001.00--------------------------------1.00---------
..............................................................................................................TATATCCCAGTCCTGCCAGCATCTAT..................................................................................................................2611.001.00-----------------------------------1.00------
.................................................................................................................................................................................................................................TGAGATAGAAGAATGTA........171.000.00--------------------1.00---------------------
..........................................CTAGCACCCTGTCAAATA..............................................................................................................................................................................................181.000.00------------------------------------1.00-----
.................................................................................................................................................................................................................................TGAGATAGAAGAATGGAAAGTT...221.000.00----------------------------------------1.00-
............................................................................AGCTACACTGTATCCCTT............................................................................................................................................................181.000.00-----1.00------------------------------------
...........................................TAGCACCCTGTCAAATTTG............................................................................................................................................................................................191.000.00--1.00---------------------------------------
...........................................TAGCACCCTGTCAAATCAT............................................................................................................................................................................................191.000.00-----------------------1.00------------------
..............................................................................................................TATATCCCAGTCCTGCCAGCATCTATGATTG.............................................................................................................3111.001.00-------1.00----------------------------------
................................................................................ACACTGTATCCGTTCACCTGGCAGCATA..............................................................................................................................................2811.001.00---------------------------------------1.00--

Antisense strand
TTATGTTACTCTATATATGACACCATTTGTTTTCTCCTCTGGCTAGCACCCTGTCAAAATGTGGCCATGCTGTGGTAGCTACACTGTATCCGTTCACCTGGCAGCATACCTATATCCCAGTCCTGCCAGCATCTATGATTGACATCGTGTGCTCACCTACACCATTCCTTATTGGAATCCTGTCTTGCTCCTTACCACAGCTCCAGGACCTACCCATTGAAGAGGTGAGATAGAAGAATGGAACCTAATA
...................................................((((((..((((((..(((....))))))))).......(((....(((((((.((............)).))))))).....))).))))))..........................................................................................................
..................................................51............................................................................................145.......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189783SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................CATACCTATATCCCAGTTG............................................................................................................................... 191.000.00-----1.00------------------------------------
.....................................................................................................................................................................................................................CCATTGAAGAGGTGAATT................... 181.000.00-----1.00------------------------------------
........................................................................................................................................................CCAATAAGGAATGGTGTAGGTGA........................................................................... 2311.001.00--------------------------------------1.00---
.................................................................................................................................................................................................TCCTGGAGCTGTGGT.......................................... 1501.001.00----------------------1.00-------------------
............................................................................................TTCACCTGGCAGCATGTAC........................................................................................................................................... 191.000.00-------------------------1.00----------------
...................................................................................................................CCCAGTCCTGCCAGCATGGC................................................................................................................... 201.000.00----------------------------1.00-------------