ID: uc001dtk.1_intron_1_0_chr1_101342421_r.5p
GENE: EXTL2(3)
chr1:101342832-101343081-


(1)
B-CELL
(1)
BREAST
(2)
CELL-LINE
(2)
CERVIX
(2)
OTHER
(5)
SKIN

Sense strand
AAACAGGATGAGAAATCGACTCCAGGTCTTTCCTGAACTGGAAACCAATGGTGAGTTGCAGTGTAGTTCTCAGCCTGGAAAGGCTGCCGCTGTCCAGAGCTGGGACAGACATGTGAATTTCTGGCCTTCTGCTTAACCGTCTGGAGAAAAATGAAGGAAGTTAGTCCTAAGAAAGCACTTTGGAAAGCTTGAGGGACAATTTCCAAGATGTCAAGAAGTGGTTTCCTGGCGAAGAGGTTAATATTGTAAT
........................................................................................................................................((.((..(((........((((......)))).........)))..))........))........................................................
.......................................................................................................................................136........................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189784SRR189782DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR343336SRR040009(GSM532894)
G727T. (cervix)
SRR343337SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR343334SRR343335SRR040042(GSM532927)
G428N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................................................................AAGCACTTTGGAAAGAGAG...........................................................19021.002.0010.003.00----1.00-1.00-1.001.00-1.001.001.00--1.00--
...........................................................................................................................................................................AAAGCACTTTGGAAAGAGAG...........................................................20017.004.009.002.004.00---1.00-1.00------------
...........................................................................................................................................................................AAAGCACTTTGGAAAG...............................................................1604.004.00---3.001.00----------------
............................................................................................................................................CTGGAGAAAAATGAAGGA............................................................................................1822.002.00---------1.50----------0.50
..........................................................................CTGGAAAGGCTGCCGCCC..............................................................................................................................................................182.000.00-------2.00-------------
............................................................................................................................................................................AAGCACTTTGGAAAG...............................................................1502.002.00----2.00----------------
......................................................................................................................................AACCGTCTGGAGAAAGTGT.................................................................................................191.000.00------------1.00--------
................................................................................AGGCTGCCGCTGTCCAGAGCTGGGACA...............................................................................................................................................2711.001.00----------------1.00----
.......................................................................................CGCTGTCCAGAGCTGGGAC................................................................................................................................................1911.001.00-----1.00---------------
...........................................................................................................................................TCTGGAGAAAAATGAAGACAG..........................................................................................211.000.00-------------------1.00-
.................GACTCCAGGTCTTTCCTGAACTGGAAACCAATGC.......................................................................................................................................................................................................341.000.00-----1.00---------------
............................................................................................................................................................................AAGCACTTTGGAAAGATAT...........................................................1901.002.001.00--------------------

Antisense strand
AAACAGGATGAGAAATCGACTCCAGGTCTTTCCTGAACTGGAAACCAATGGTGAGTTGCAGTGTAGTTCTCAGCCTGGAAAGGCTGCCGCTGTCCAGAGCTGGGACAGACATGTGAATTTCTGGCCTTCTGCTTAACCGTCTGGAGAAAAATGAAGGAAGTTAGTCCTAAGAAAGCACTTTGGAAAGCTTGAGGGACAATTTCCAAGATGTCAAGAAGTGGTTTCCTGGCGAAGAGGTTAATATTGTAAT
........................................................................................................................................((.((..(((........((((......)))).........)))..))........))........................................................
.......................................................................................................................................136........................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189784SRR189782DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR343336SRR040009(GSM532894)
G727T. (cervix)
SRR343337SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR343334SRR343335SRR040042(GSM532927)
G428N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............AAATCGACTCCAGGTCTGAG.......................................................................................................................................................................................................................... 201.000.001.00--------------------
.........AGTTCAGGAAAGACCTGGAGTCGATTTCTC................................................................................................................................................................................................................... 3011.001.00-----------------1.00---
...........................................................................................................................................CTTCATTTTTCTCCAGA.............................................................................................. 1780.250.25----------0.120.12---------