ID: uc001dte.3_intron_9_0_chr1_100933651_f.3p
GENE: (10)
chr1:100949648-100949897+


(5)
CELL-LINE
(4)
OTHER

Sense strand
AATATAGAATCTTATTTTGGCTTTTTGAAAGTGACTTCATTGTTCTTTATTCTAAGATATCATAATCTTTCTAGTCTGATTTGTAAATGCTTATTTGCTAAATCTTTTCCTTTATAAGACATCATACCTTTGAGATGAGAGTAGATTGTTTTAAAGATAACTTTTTCTTGTCGTTTTGTTTTGTTTTGTTTTTTATACAGAAAACAAGCATCGTTGTGGGTCCAAGGAGACATTTTCCGATCCAAACTGA
.................................................................................................................((((((((....((......((..((((.((.(((((.....)))))))..))))..)).....))..)))))))).............................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR343336SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR189782SRR189786SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCC.........................................................2316.000.006.0010.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTCC.....................................................277.000.003.004.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTGGTT.....................................................276.000.005.001.00-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTT.........................................................2616.006.001.005.00-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTTTG......................................................295.000.002.002.001.00------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTGGT......................................................264.000.004.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTGAGG.....................................................274.000.002.002.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTCTCT.....................................................274.000.001.003.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCGC........................................................243.000.00-3.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTAGAG....................................................2813.001.003.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTCTTT....................................................283.000.003.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCTG.......................................................253.000.003.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTGG......................................................263.000.003.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTAATG....................................................2813.001.001.002.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTGCCC.......................................................253.000.002.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTGCC........................................................243.000.003.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTTTTTCC.....................................................293.000.001.002.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTCCGC.....................................................272.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTAGAG......................................................262.000.00-2.00-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTTT.......................................................282.000.001.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTCCT....................................................282.000.002.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTGAG........................................................262.000.001.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTCCTG....................................................282.000.001.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTATT.......................................................252.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTCTGC........................................................242.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCTGG.......................................................252.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTAGGC.....................................................272.000.002.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTTCC........................................................262.000.001.001.00-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTTTGAG....................................................312.000.001.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTGG.....................................................272.000.00-1.00-----1.00-
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCTTT......................................................262.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTGGAC........................................................242.000.00-2.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTCGAG....................................................282.000.002.00--------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTTTTAGC.....................................................262.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTCAC....................................................282.000.002.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTTTGG.......................................................272.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTCCT.....................................................272.000.001.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTCTT.....................................................272.000.002.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCGG.......................................................252.000.002.00--------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTTACCT......................................................252.000.001.001.00-------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTCGTT.......................................................272.000.002.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTCC.........................................................252.000.001.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTGC.....................................................272.000.001.001.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTCCTT.....................................................271.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCTCC......................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTGGAC.......................................................251.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTAGTC....................................................2811.001.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCAGA......................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCGGC.......................................................251.000.001.00--------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTTGGAG....................................................311.000.00--1.00------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGGGG...........................................................241.000.001.00--------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTTAGT.....................................................301.000.001.00--------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTCTGG...........................................................241.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCCGG......................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTGGTT.......................................................251.000.00-1.00-------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTGGAC.......................................................241.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTCTG......................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTATTG.....................................................271.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTGTCT.....................................................271.000.001.00--------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTCCC........................................................231.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTGGC........................................................241.000.001.00--------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTTAGAG....................................................311.000.001.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTTTTTG......................................................281.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCGCC......................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTGTCC.....................................................271.000.00-1.00-------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGCTTC..........................................................241.000.001.00--------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTTGAG...........................................................241.000.00-1.00-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTACCG......................................................291.000.00--1.00------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTATTTTC..................................................301.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCTTT.......................................................251.000.001.00--------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTG........................................................2711.006.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTGAC....................................................281.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTGAGG....................................................281.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTCTCC.....................................................271.000.00-1.00-------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTTTTCCC.....................................................291.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTCGAG.....................................................271.000.001.00--------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTTTTACC.....................................................261.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTC...........................................................211.000.00-1.00-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTTGT.......................................................2811.006.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCTC........................................................241.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTTCC....................................................281.000.001.00--------
...............................................................................................................TTATAAGACATCATACGA.........................................................................................................................181.000.00------1.00--
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTA.......................................................2511.001.001.00--------
........................................................................................................................................................................................................AAAACAAGCATCGTTGTGGGTA............................221.000.00-----1.00---
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTATC.....................................................271.000.001.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTC.................................................................171.000.00--1.00------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTTAC........................................................271.000.001.00--------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTTTTCCT.....................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTCCTC......................................................261.000.001.00--------
..............................................................................................................................................................................TTTGTTTTGTTTTGTTTTTTATCTTC..................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTAGG.......................................................251.000.001.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTTTTGTTTTTCTTC.....................................................291.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTAGAG........................................................241.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTGGTC.....................................................271.000.00-1.00-------
.....................................CATTGTTCTTTATTCTTTCG.................................................................................................................................................................................................201.000.00--------1.00
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTGCC......................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTACCA.....................................................271.000.001.00--------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTTTCAGC.....................................................261.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTGGTA........................................................241.000.001.00--------
........................................................................................................................................................................TGTCGTTTTGTTTTGTGGG...............................................................191.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCTCT.......................................................251.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTGACC............................................................201.000.001.00--------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTTTGGAG.....................................................261.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTCTG.........................................................231.000.00-1.00-------
...........................................................................................................................................................................CGTTTTGTTTTGTTTTGTTTTTTTCCT....................................................271.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCCTC.......................................................251.000.001.00--------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTTGTG...........................................................241.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTCTT........................................................241.000.001.00--------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTAC.........................................................231.000.00-1.00-------
..........................................................................................................................................................................TCGTTTTGTTTTGTTTTGTTTTTTTAAG....................................................281.000.00-1.00-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTTCC.........................................................2630.670.33-0.67-------
.......................................................................................................................................................................TTGTCGTTTTGTTTTGTTTTGTTT...........................................................2430.330.33-0.33-------

Antisense strand
AATATAGAATCTTATTTTGGCTTTTTGAAAGTGACTTCATTGTTCTTTATTCTAAGATATCATAATCTTTCTAGTCTGATTTGTAAATGCTTATTTGCTAAATCTTTTCCTTTATAAGACATCATACCTTTGAGATGAGAGTAGATTGTTTTAAAGATAACTTTTTCTTGTCGTTTTGTTTTGTTTTGTTTTTTATACAGAAAACAAGCATCGTTGTGGGTCCAAGGAGACATTTTCCGATCCAAACTGA
.................................................................................................................((((((((....((......((..((((.((.(((((.....)))))))..))))..)).....))..)))))))).............................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR343336SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR189782SRR189786SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
........................................................................................................................................GAGAGTAGATTGTTTTAACTAG............................................................................................ 221.000.00---1.00-----
...............................................................................................................................................GATTGTTTTAAAGATAAG......................................................................................... 181.000.00----1.00----