ID: uc001dsu.2_intron_1_0_chr1_100551187_r.5p
GENE: (15)
chr1:100553495-100553744-


(1)
AGO2.ip 		(2)
B-CELL 		(3)
BREAST 		(46)
CELL-LINE 		(7)
HELA 		(2)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(40)
SKIN 		(2)
XRN.ip

Sense strand
GTTCAGTCAGGAGCAACTATTAGTATGCCTTGCTCAACTGATAAGGAAAAGTAAGTGCTTAATGACATAAAATTTAATGTTTGCAATTTTGAAGGCCATCTTACAGAATTTTTATCAGTGCTTGAGAGCTGTGATGCCCACCTGTTTACCTGAGACATTTCAAGTTACTGATCATTGGAATTTAAGTTGAATTACTCTTAGCTATAAAAAAGAGATTTCTCATACTTTTTTCTGTTTCCTCCTCCAACAA
.............................................................................................................................((((.(((.....)))..))))..((((((...(((((.(((....((....))...))).)))))....)))))).................................................
.............................................................................................................................126.............................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR029127(GSM416756)
A549. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189783SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR189782SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		GSM359173(GSM359173)
hela_10_1. (hela)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM359205(GSM359205)
HepG2_nucl_up. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		GSM956925PAZD5SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGA...............................................................................................2913387.003387.00513.00401.00390.00281.00319.00219.00221.00187.00175.00120.0066.00--48.0041.0046.0041.0038.0032.0022.0025.0014.0012.0015.006.0010.002.004.007.008.006.005.004.005.006.006.0010.002.003.004.006.002.002.006.006.001.003.00-4.00-5.002.00-4.002.004.00-3.001.001.00-1.001.00-1.00--1.001.001.001.001.001.00---1.00-1.001.001.00--1.00-1.001.001.00-------1.00--1.00-1.00-1.00--
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGAGA...............................................................................................301776.00776.0097.0099.0082.00102.0020.0038.0016.0015.0037.0024.0021.00--19.0021.009.0011.006.0010.0013.007.009.008.002.0012.004.005.007.003.003.00-6.001.005.005.004.00-6.005.001.002.003.004.00--4.002.00-1.00--2.004.001.001.00-3.00-2.00--1.00----2.001.001.001.00-1.00---1.00-1.00------1.00-------1.00---1.001.00-1.00-----
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTG..................................................................................................261164.00164.00-----------82.0076.00------1.00------------1.00--------------4.00---------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGAC..............................................................................................30147.0047.0023.002.007.00---1.00-1.00-3.00--1.00-1.00---1.00-------1.00----1.00----------------4.00--------------------1.00----------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGAGAC..............................................................................................31141.0041.005.00--6.001.00--12.00-2.001.00----2.002.001.00-2.00----1.00-----1.00-1.00--1.00-1.00-------------1.00--1.00--------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAG................................................................................................28135.0035.00-9.00-2.005.00-3.002.00-2.00-----1.001.00-2.00---1.002.00-2.00----1.00--1.00-----------------------------------------------1.00-----------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTTAGA...............................................................................................29126.004.002.00-1.004.00-3.001.00-1.00-1.00--3.00---3.00--2.001.00----2.00------------2.00-----------------------------------------------------------------
...............................................................................................................................GCTGTGATGCCCACCTGTTTACCTGAGA...............................................................................................28118.0018.00----12.00-3.00------1.00-------------1.00--------------------------------------------------------------1.00--------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGACA.............................................................................................31117.0017.003.00------6.00--1.00----1.001.00--1.00-------1.00----1.00----------------1.00--------------------------------------1.00----------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGATA...............................................................................................29115.003.00---2.00--1.00------2.00---3.00--5.00-----1.00-------------------------------------------------------------------1.00----------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGCGA...............................................................................................29112.00164.004.00--1.001.00-1.00---1.00---1.00-1.00-1.00---1.00----------------------------------------------------------------------------------
..................................................................................................................................GTGATGCCCACCTGTTTACCTGAGA...............................................................................................2519.009.00---2.00-----5.00---1.00------1.00------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTA......................................................................................................2217.007.00-----------1.004.00----------------------------------------------2.00---------------------------------------------
......................................................................................................................................TGCCCACCTGTTTACCTGAGA...............................................................................................2115.005.001.00-1.001.00-------------1.00--------1.00------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGAGACA.............................................................................................3215.005.00----2.00--------3.00-------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGAG................................................................................................2915.005.00----2.00-1.00-1.00-------------------------------------------------------1.00----------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGC...............................................................................................2914.0035.00---------1.00---1.00--------------2.00----------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGATA...............................................................................................3014.004.00-----1.00--1.00-----------------2.00------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAAA...............................................................................................2914.003.002.00---1.00---------1.00------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCT...................................................................................................2514.004.00----------2.00--------1.00------------1.00------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGA.................................................................................................2814.004.00----3.00------------------1.00---------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGCGA...............................................................................................304.000.001.00-1.00-----------1.00--------------------------1.00---------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGGGA...............................................................................................2913.00164.00-1.001.00-----1.00------------------------------------------------------------------------------------------------
.................................................................................................................................TGTGATGCCCACCTGTTTACCTGAGA...............................................................................................2613.003.00-3.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTATCTG..................................................................................................2613.007.00-----------1.002.00--------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGA.................................................................................................2713.003.00---------------1.001.00-------------1.00--------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGACAT............................................................................................3213.003.00----1.00-------------------------2.00--------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTAC.....................................................................................................2413.003.00-----------1.00-------------1.00-----------------------------------------------1.00-------------------------------
.....................................................................................................................................ATGCCCACCTGTTTACCTGAGA...............................................................................................2213.003.00----3.00----------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGTGA...............................................................................................2912.00164.001.00--1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGT.........................................................................................................2012.002.00----------2.00----------------------------------------------------------------------------------------------
..........................................................................................................................................CACCTGTTTACCTGAGA...............................................................................................1712.002.00-----------------------------------------------------------------2.00---------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTAC.....................................................................................................2312.002.00-----------1.001.00--------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGACA...............................................................................................3012.004.00----2.00----------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTTATA...............................................................................................2912.004.00-----------------1.00--1.00------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTCAGA...............................................................................................2912.004.00---1.00-----------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTA......................................................................................................2312.002.00--------------------------------------------------------------------------1.00--------------------------1.00---
.........................................................................................................................................CCACCTGTTTACCTGAGA...............................................................................................1812.002.00-2.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCC...................................................................................................252.000.00--------------2.00------------------------------------------------------------------------------------------
...............................................................................................................................GCTGTGATGCCCACCTGTTTACCTG..................................................................................................2512.002.00-----------1.001.00--------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGT...............................................................................................2912.0035.00----1.00--1.00-------------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTTAGA...............................................................................................302.000.00--------------1.00-----------1.00------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGT.........................................................................................................1912.002.00-------------------1.00------------1.00------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGACA...............................................................................................2912.003.00-1.00--1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................GTGATGCCCACCTGTTTACCTGAG................................................................................................2411.001.00--------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTGAGA...................................................................................................261.000.00------------------------------------------------------------------------1.00--------------------------------
...............................................................................................................................GCTGTGATGCCCACCTGTTTACCTGAG................................................................................................2711.001.00---------------------------------------------------------------------------------------------1.00-----------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGAA..............................................................................................3011.003387.00------1.00--------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTATTTG..................................................................................................2611.007.00-----------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................GCTGTGATGCCCACCTGTTTACTTG..................................................................................................2511.001.00-----------------------------------------------1.00---------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTG......................................................................................................221.000.00-----------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................TACCTGAGACATTTCAACATG...................................................................................211.000.00------------------------------------------------------------1.00--------------------------------------------
..................................................................................................................................GTGATGCCCACCTGTTTACCTTAGG...............................................................................................251.000.00---------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACTTG..................................................................................................2611.002.00-----------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTCAGA...............................................................................................301.000.00----------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAGG...............................................................................................2911.0035.00----1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACT....................................................................................................2511.003.00----------------------------------------------------------------------------------1.00----------------------
...............................................................................................................................GCTGTGATGCCCACCTGTTTACCTGAGACA.............................................................................................3011.001.00----1.00----------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTGAT................................................................................................2811.003.00-----------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGAGACATT...........................................................................................3411.001.00-----------------------------------------------------------------------------------------1.00---------------
...CAGTCAGGAGCAACTATTAGTATGCC.............................................................................................................................................................................................................................2611.001.00---------------------------------------------------------------1.00-----------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTACCTTCGA...............................................................................................2911.004.00---------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGAGC...............................................................................................3011.005.00----------------------------------------------------1.00----------------------------------------------------
.....................................................................................................................................ATGCCCACCTGTTTACCTGATA...............................................................................................221.000.00--------------------1.00------------------------------------------------------------------------------------
......................................................................................................ACAGAATTTTTATCAGAAGA................................................................................................................................201.000.00--------------------------------------------------------------1.00------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCACCTGTTTACCTGAGAA..............................................................................................3111.00776.00-------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTGA.....................................................................................................231.000.00------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................GAATTTAAGTTGAATTACTCTCAGC................................................251.000.00-------------------------------------------------------------------------------------------1.00-------------
...............................................................................................................................GCTGTGATGCCCACCTGTTTAC.....................................................................................................2211.001.00------------1.00--------------------------------------------------------------------------------------------
..............................................................................................................................AGCTGTGATGCCCACCTGTTTTTTG...................................................................................................251.000.00-----------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................GAGCTGTGATGCCCAC.............................................................................................................1630.330.33-------------------------------------------------------------------------------------------------------0.33-

Antisense strand
GTTCAGTCAGGAGCAACTATTAGTATGCCTTGCTCAACTGATAAGGAAAAGTAAGTGCTTAATGACATAAAATTTAATGTTTGCAATTTTGAAGGCCATCTTACAGAATTTTTATCAGTGCTTGAGAGCTGTGATGCCCACCTGTTTACCTGAGACATTTCAAGTTACTGATCATTGGAATTTAAGTTGAATTACTCTTAGCTATAAAAAAGAGATTTCTCATACTTTTTTCTGTTTCCTCCTCCAACAA
.............................................................................................................................((((.(((.....)))..))))..((((((...(((((.(((....((....))...))).)))))....)))))).................................................
.............................................................................................................................126.............................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR029127(GSM416756)
A549. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189783SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR189784SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR189782SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		GSM359173(GSM359173)
hela_10_1. (hela)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM359205(GSM359205)
HepG2_nucl_up. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		GSM359203(GSM359203)
hepg2_untreated_b. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		GSM956925PAZD5SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................................................................TGGAATTTAAGTTGAATCTTG...................................................... 211.000.00------------------------------------------------------------1.00--------------------------------------------
...........................TTTTCCTTATCAGTTGAGCAAGG........................................................................................................................................................................................................ 2311.001.00----------------1.00----------------------------------------------------------------------------------------
.......................................................................................................................................AGGTAAACAGGTGGGC................................................................................................... 1630.330.33--------------------------------------------------------------------------------------------------------0.33