ID: uc001dqt.2_intron_1_0_chr1_95006623_r
GENE: (1)
chr1:95006573-95007142-


(1)
AGO1.ip
(1)
AGO2.ip
(9)
BRAIN
(7)
BREAST
(14)
CELL-LINE
(7)
CERVIX
(5)
HEART
(3)
HELA
(4)
LIVER
(1)
OTHER
(38)
SKIN
(1)
XRN.ip

Sense strand
TCGGACGCTCCTGCTCGGCTGGGTCTTCGCCCAGGTGGCCGGCGCTTCAGGTGAGTGGCACCAGCCCCTGGAAGCCCGGGGCGCGCCACACGCAGGAGGGAGGCGACAGTCCTGGCTGGCAGCGGGCTCGCCCTGGTTCCCCGGGGCGCCCATGTTGTCCCCCGCGCCTACGGGACTCGGCTGCGCTCACCCAGCCCGGCTTGAATGAACCGAGTCCGTCGGGCGCCGGCGGGAGTTGCAGGGAGGGAGTTGGCGCCCCAGACCCCGCTGCCCCTTCCGCTGGAGAGTTTTGCTCGGGGTGTCCGAGTAATTGGACTGTTGTTGCATAAGCGGACTTTTAGCTCCCGCTTTAACTCTGGGGAAAGGGCTTCCCAGTGAGTTGCGACCTTCAATATGATAGGACTTGTGCCTGCGTCTGCACGTGTTGGCGTGCAGAGGTTTGGATATTATCTTTCATTATATGTGCATCTTCCCTTAATAAAGAGCGTCCCTGGTCTTTTCCTGGCCATCTTTGTTCTAGGTTTGGGTAGAGGCAATCCAAAAGGGCTGGATTGCTGCTTAGATTGGAGC
....................................................................................................................................................................................................................(((((((...((.((((((((((..((((...(((..((((....))))..))).))))..))))))))))..((((((((((((.....))))))))...))))......))....)))))))..........................................................................................................................................................................................................................................
....................................................................................................................................................................................................................213........................................................................................................................336........................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343337SRR040028(GSM532913)
G026N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM532874(GSM532874)
G699T. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGC.................................................................................................................................................................................................................................................................................................................................................16284.008.5010.0012.0013.009.004.00---4.005.002.003.003.004.003.002.00----------2.001.00----------------1.00-------------1.00-----------1.00-1.00-1.00--------1.001.00--------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGCTT...............................................................................................................................................................................................................................................................................................................................................18233.008.5013.009.002.00-3.00-----1.002.00-------------------------2.00------1.00------------------------------------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGCT................................................................................................................................................................................................................................................................................................................................................17227.008.509.002.002.002.002.00---1.00-2.00-1.001.001.00------------1.00----1.00--------1.00-------------------------------1.00-------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGCTTT..............................................................................................................................................................................................................................................................................................................................................19216.008.505.003.001.001.00------1.00---1.00--------------------------1.00------------1.00---------------------------1.00----1.00-----
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGG..................................................................................................................................................................................................................................................................................................................................................1528.508.501.000.50-0.501.00---1.50----0.50------------0.500.501.00-----------------------------------------------------------0.500.500.50--
.....................................................................................................................................................................................................................................................................................................................ATTGGACTGTTGTTGCATAAGCG..............................................................................................................................................................................................................................................2316.006.00------2.00-------------1.00-3.00----------------------------------------------------------------------
.......................................................................................................................................................................................................................CCGTCGGGCGCCGGCGC..................................................................................................................................................................................................................................................................................................................................................1714.001.00-------------------------1.00-------------1.00--1.00----------------------------1.00---------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGCAGAGGTTTGGAT.............................................................................................................................1913.003.00----------------------------------2.00-----1.00----------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGGACTGTTGTTGCATAAGCGG.............................................................................................................................................................................................................................................2213.003.00-----------------------------1.00---2.00-----------------------------------------------------------
..GGACGCTCCTGCTCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.002.00-----------------------2.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................GGGGAAAGGGCTTCCCAGT..................................................................................................................................................................................................1912.002.00-------------------------------2.00-------------------------------------------------------------
............................................................................................................GTCCTGGCTGGCAGCGGGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00------------------2.00--------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTTTGGGTAGAGGCA...................................1812.002.00------1.00--------------------------------------1.00-----------------------------------------------
..GGACGCTCCTGCTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1512.002.00-----------------------1.00---------------------------------1.00-----------------------------------
.......................................................................................................................................................................................................................CCGTCGGGCGCCGGCGCGCC...............................................................................................................................................................................................................................................................................................................................................2012.001.00-1.00------------------------------------------------------------1.00------------------------------
.....................................................................................................................................................................................................................................................................................................................ATTGGACTGTTGTTGCATAAGCGGA............................................................................................................................................................................................................................................2512.002.00-----2.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGTGCAGAGGTTTGGA..............................................................................................................................1912.002.00-----1.00-------------1.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................GTAATTGGACTGTTGTTGCATAAG................................................................................................................................................................................................................................................2411.001.00----------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................GAATGAACCGAGTCCGTCGGGCGCCGGCGG..................................................................................................................................................................................................................................................................................................................................................3011.001.00-------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGTC................................................................................................................................................................................................................................................................................................................................................1721.008.50------------------------------------------1.00--------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCGTGCAGAGGTTTGGAT.............................................................................................................................2111.001.00------1.00--------------------------------------------------------------------------------------
........................................................................................CACGCAGGAGGGAGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00---------------------------------------------------------------1.00-----------------------------
...............................................................................................................CTGGCTGGCAGCGGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00--------------------1.00------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................TTGGACTGTTGTTGCATAAGCG..............................................................................................................................................................................................................................................2211.001.00----------------1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTAGAGGCAATCCAAAAGGGCTGGAT..................2911.001.00-------1.00-------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................TCCGAGTAATTGGACTGTTGTTGC.....................................................................................................................................................................................................................................................2411.001.00-----------------1.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................GGGCGCCGGCGGGAGGACC...........................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------1.00--------------------------------------------------------------
............................................................................................CAGGAGGGAGGCGACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................TCCGTCGGGCGCCGGCGGCT................................................................................................................................................................................................................................................................................................................................................201.000.00--------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CCGTCGGGCGCCGGCG...................................................................................................................................................................................................................................................................................................................................................1611.001.00------------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTGGGTAGAGGCA...................................1711.001.00--------------------1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCGTCCCTGGTCTTTTCCT...................................................................2311.001.00--------------------------------------------------------------------------------------1.00------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGATTGCTGCTTAGAT......1911.001.00-----1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................ATTGGACTGTTGTTGCATAAGCGGAC...........................................................................................................................................................................................................................................2611.001.00---------------------------------------------------------------------------------1.00-----------
..........CTGCTCGGCTGGGTCTTCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------1.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGCGTGCAGAGGTTTGGATA............................................................................................................................2411.001.00----------------1.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................CCGTCGGGCGCCGGCGCT.................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------1.00---------------------------
............................................................................................................................................................................................................................GGGCGCCGGCGGGAGGCCT...........................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------1.00--------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGCTGGATTGCTGCTTAGA.......2311.001.00------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................ACGGGACTCGGCTGCGCTCACCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-------------------------------------------------1.00-------------------------------------------
................................................................................................................................................................................................................................................................................................................GAGTAATTGGACTGTTGTTGCATAAG................................................................................................................................................................................................................................................2611.001.00-----1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCAGAGGTTTGGATATTA.........................................................................................................................2211.001.00--------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAAGGGCTGGATTGCTGC............2111.001.00-----------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................CGGCGGGAGTTGCAGGGAGGGAGTTGGC............................................................................................................................................................................................................................................................................................................................2811.001.00-----------------------------------------------------------------------------1.00---------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGCTGCTTAGATTGGAG.2111.001.00-------------------1.00-------------------------------------------------------------------------
....................................................................................................................................................................CGCCTACGGGACTCGGCTGCG.................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------1.00-----------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTTTGGGTAGAGGCAATC................................2111.001.00------1.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGCGTGCAGAGGTTT.................................................................................................................................1911.001.00-----------------------------------------------------------1.00---------------------------------
....................................................................................................................................................................................................................................................................................................CTCGGGGTGTCCGAGTAATTGGACTGTT..........................................................................................................................................................................................................................................................2811.001.00-----------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................GTAATTGGACTGTTGTTGCATAAGCGG.............................................................................................................................................................................................................................................2711.001.00-----1.00---------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGGACTGTTGTTGCATAA.................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00--------------------------------
....................................................................TGGAAGCCCGGGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001.00-------------------------------------------------------------------------------1.00-------------
................................................................................................................................................................................................................................................GGGAGGGAGTTGGCGCAT........................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------------1.00-------
.........................TTCGCCCAGGTGGCCCGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------1.00------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGTTGGCGTGCAGAG.....................................................................................................................................1811.001.00-----------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTTTGGGTAGAGGCAATCC...............................2211.001.00-----1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CGTCGGGCGCCGGCGCGC................................................................................................................................................................................................................................................................................................................................................1821.000.50-------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGGGTAGAGGCAATCCAAAAGGGCTGG....................3111.001.00-------1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................TACGGGACTCGGCTG...................................................................................................................................................................................................................................................................................................................................................................................................1511.001.00-------1.00-------------------------------------------------------------------------------------
........................CTTCGCCCAGGTGGCCGGCGCTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------1.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CCGTCGGGCGCCGGCGTCTC...............................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------------1.00----------------------------
..........................................................................................................................................................................................................GAATGAACCGAGTCCGTCGGGCGCCGG.....................................................................................................................................................................................................................................................................................................................................................2711.001.00------------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGTTTGGGTAGAGGCAATC................................2311.001.00----------------1.00----------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................CCTTCAATATGATAGGACTTGTGC.................................................................................................................................................................2411.001.00-------------------------------------------------------------------1.00-------------------------
...............................................................................................................................................................................................................................................................................................................................................................AACTCTGGGGAAAGGGCTTC.......................................................................................................................................................................................................2011.001.00-----1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAAGGGCTGGATTGCT..............1911.001.00----------------------------------------1.00----------------------------------------------------
........................................................................................................GACAGTCCTGGCTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------1.00-------------------------------------------------------------------------
.............................................................................................AGGAGGGAGGCGACAGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------1.00--------------------------------------------------------
.........................TTCGCCCAGGTGGCCGGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------1.00---------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGGACTGTTGTTGCATA..................................................................................................................................................................................................................................................1711.001.00------1.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................TCCGAGTAATTGGACTG............................................................................................................................................................................................................................................................1711.001.00---------------------------------------------1.00-----------------------------------------------
............................................................................................................................................................................................................ATGAACCGAGTCCGTCGGGCGCCGGCGG..................................................................................................................................................................................................................................................................................................................................................2811.001.00-------1.00-------------------------------------------------------------------------------------
............................................................................................................................................................................................................................GGGCGCCGGCGGGAGCCG............................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------1.00---------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCAGAGGTTTGGATAT...........................................................................................................................1911.001.00-------------------------------------------------------1.00-------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GCTCCCGCTTTAACTCTTGG..................................................................................................................................................................................................................201.000.00-----------------------------------------------------1.00---------------------------------------
.............................................................................................................................................................................................................................................................................................................................GTTGTTGCATAAGCGGACTTT........................................................................................................................................................................................................................................2111.001.00--------------------------------------1.00------------------------------------------------------
..............................................................................................................................................................................................................GAACCGAGTCCGTCGGGCGCCGGC....................................................................................................................................................................................................................................................................................................................................................2411.001.00-------1.00-------------------------------------------------------------------------------------
..GGACGCTCCTGCTCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00----------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................................................................................................................................................GTAATTGGACTGTTGTTGCATAA.................................................................................................................................................................................................................................................2311.001.00----------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................AGTCCGTCGGGCGCCGGC....................................................................................................................................................................................................................................................................................................................................................1811.001.00-------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGCAT...............................................................................................................................................................................................................................................................................................................................................1821.008.50----1.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................................CGGCTTGAATGAACCGAGTCCGTCGGG...........................................................................................................................................................................................................................................................................................................................................................2711.001.00-------------------------------------------------------------1.00-------------------------------
............................................................................................................................................................................................................................................TGCAGGGAGGGAGTTGGCG...........................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------1.00---------------------------------------------------------
..................................................................................................................................................................CGCGCCTACGGGACTCGGCT....................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------1.00----------------
...............................................................................................................................................................................................................................................................................................................CGAGTAATTGGACTGTTGTTGCAT...................................................................................................................................................................................................................................................2411.001.00-------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................CGCCTACGGGACTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------1.00-----------------------------------------------------------------------
.......................................................................................................................................................................................................................CCGTCGGGCGCCGGCGG..................................................................................................................................................................................................................................................................................................................................................1711.001.00------------------------------------------------------------------1.00--------------------------
.....................................................................................................................................................................................................................................................................................................................ATTGGACTGTTGTTGCATAAGCGG.............................................................................................................................................................................................................................................2411.001.00-----1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGTCG...............................................................................................................................................................................................................................................................................................................................................1821.008.50---------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGT.................................................................................................................................................................................................................................................................................................................................................1621.008.50-------------------------------------------1.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGGTCTTTTCCTGGCC...............................................................1911.001.00--------------------------------------------------------------------1.00------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................TTCAATATGATAGGACTTGTGC.................................................................................................................................................................2211.001.00----------------------------------------------------1.00----------------------------------------
................................................................CCCCTGGAAGCCCGGCGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---1.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGGT................................................................................................................................................................................................................................................................................................................................................1721.000.50--------------------------------1.00------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................TAATTGGACTGTTGTTGCATAAGC...............................................................................................................................................................................................................................................2411.001.00------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CGTCGGGCGCCGGCG...................................................................................................................................................................................................................................................................................................................................................1520.500.50-------------------------------------------------------------------------------------------0.50-
........................................................................................CACGCAGGAGGGAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50----------------------------------------------0.50----------------------------------------------
.........................................................................................................................................................................................................................GTCGGGCGCCGGCGGG.................................................................................................................................................................................................................................................................................................................................................1620.500.50-------0.50-------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CCGTCGGGCGCCGGC....................................................................................................................................................................................................................................................................................................................................................1520.500.50-------------------------0.50-------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAAGGGCTGGATTGC...............1920.500.50------------------------0.50--------------------------------------------------------------------
............................................................................................................................................................................................................................................................GCGCCCCAGACCCCG...............................................................................................................................................................................................................................................................................................................1560.330.33----------------------------0.33----------------------------------------------------------------
................................................................................................................................................................................................................................................GGGAGGGAGTTGGCG...........................................................................................................................................................................................................................................................................................................................1540.250.25-----------------------------------------------0.25---------------------------------------------

Antisense strand
TCGGACGCTCCTGCTCGGCTGGGTCTTCGCCCAGGTGGCCGGCGCTTCAGGTGAGTGGCACCAGCCCCTGGAAGCCCGGGGCGCGCCACACGCAGGAGGGAGGCGACAGTCCTGGCTGGCAGCGGGCTCGCCCTGGTTCCCCGGGGCGCCCATGTTGTCCCCCGCGCCTACGGGACTCGGCTGCGCTCACCCAGCCCGGCTTGAATGAACCGAGTCCGTCGGGCGCCGGCGGGAGTTGCAGGGAGGGAGTTGGCGCCCCAGACCCCGCTGCCCCTTCCGCTGGAGAGTTTTGCTCGGGGTGTCCGAGTAATTGGACTGTTGTTGCATAAGCGGACTTTTAGCTCCCGCTTTAACTCTGGGGAAAGGGCTTCCCAGTGAGTTGCGACCTTCAATATGATAGGACTTGTGCCTGCGTCTGCACGTGTTGGCGTGCAGAGGTTTGGATATTATCTTTCATTATATGTGCATCTTCCCTTAATAAAGAGCGTCCCTGGTCTTTTCCTGGCCATCTTTGTTCTAGGTTTGGGTAGAGGCAATCCAAAAGGGCTGGATTGCTGCTTAGATTGGAGC
....................................................................................................................................................................................................................(((((((...((.((((((((((..((((...(((..((((....))))..))).))))..))))))))))..((((((((((((.....))))))))...))))......))....)))))))..........................................................................................................................................................................................................................................
....................................................................................................................................................................................................................213........................................................................................................................336........................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343337SRR040028(GSM532913)
G026N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM532874(GSM532874)
G699T. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTAGAACAAAGATGGCCAGG............................................... 2312.002.00---------------------2.00-----------------------------------------------------------------------
................................................................................................................................................................................................................................................................................GCAAAACTCTCCAGCGGAAGG..................................................................................................................................................................................................................................................................................... 2112.002.00------------------2.00--------------------------------------------------------------------------
...................................................................................................................................CCTGGTTCCCCGGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................... 162.000.00---------------2.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................GTCCGTCGGGCGCCGCAGC.................................................................................................................................................................................................................................................................................................................................................. 191.000.00-----------------------------------------------1.00---------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAACCTCTGCACGCC............................................................................................................................. 1911.001.00--------------------------------------------------------1.00------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTGCCTGCGTTGGT....................................................................................................................................................... 191.000.00------------------------------------1.00--------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGGTTTGGATATTC......................................................................................................................... 181.000.00--------------------------------------------------1.00------------------------------------------
...................................................................................................................................CCTGGTTCCCCGGGGCGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00----------------------------1.00----------------------------------------------------------------
...........................................................................................................................................................................................CACCCAGCCCGGCTTCG.............................................................................................................................................................................................................................................................................................................................................................................. 171.000.00---------------------------------------1.00-----------------------------------------------------
....................................GGCCGGCGCTTCAGGTGTATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 211.000.00------------------------------------------------------------------------------1.00--------------
..............................................................................................................................................................................................CCAGCCCGGCTTGAATCTC......................................................................................................................................................................................................................................................................................................................................................................... 191.000.00------------1.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................GCGGGGTCTGGGGCGCCAA.............................................................................................................................................................................................................................................................................................................. 1911.001.00---------------------------------------------------------------------1.00-----------------------
.........................................................................................................................................................GTTGTCCCCCGCGCCCAA............................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00---------------------------------------------------1.00-----------------------------------------
....................................GGCCGGCGCTTCAGGGGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00---------------1.00-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................CGCCCCAGACCCCGCATTT.......................................................................................................................................................................................................................................................................................................... 190.170.00--------------------------------------------------------------------------------------------0.17
.............................................................................................................................................................................................................................................................GCGGGGTCTGGGGCG.............................................................................................................................................................................................................................................................................................................. 1560.170.17-----------------0.17---------------------------------------------------------------------------