ID: uc001dor.2_intron_4_0_chr1_92729290_r.3p
GENE: (14)
chr1:92729240-92729489-


(1)
AGO1.ip
(15)
B-CELL
(3)
BRAIN
(11)
BREAST
(37)
CELL-LINE
(6)
CERVIX
(2)
FIBROBLAST
(8)
HEART
(3)
HELA
(9)
LIVER
(1)
OTHER
(1)
RRP40.ip
(58)
SKIN
(1)
TESTES
(2)
UTERUS

Sense strand
AATGGAAAACAGAGTGACCAGTGTTCTCAAACTGGCAGGGTTCGTTCCTGGTGTCTGGAAAGTGAATGAAAGTACGGAAATTAAAGTTAAAAACTGTATTTTAAATGTGCAATTCTTCATTTTTGTAGTGTCAAGGTATTAGAAAAACACATGAATTACATGAATTATAAAGCTTTCTCAATTTTTCGTTTGCTTTTCAGAGAACACGTAACAACAAATGGTTTACAGGACCACAGTTGATTTCCCTTCT
........................................................................................................(((((...((((....(((((......)))))....))))...)))))..................................................................................................
.........................................................................................90..............................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040018(GSM532903)
G701N. (cervix)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR029129(GSM416758)
SW480. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
GSM532890(GSM532890)
G576T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038857(GSM458540)
D20. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
....................................................................................................................................AAGGTATTAGAAAAAACC....................................................................................................180124.001.0028.00-5.006.002.009.007.004.006.007.005.005.001.001.00-2.00---3.002.00-3.003.001.00-1.002.00----2.001.002.001.001.001.001.00----1.00-----1.001.001.00-1.001.001.00-1.00-1.001.001.00---------1.00-------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAC......................................................................................................16766.7166.715.86--6.71-2.141.574.291.29-2.002.004.294.43-2.29-4.143.140.71-3.430.290.290.14-0.430.14-------0.710.57-0.57--1.291.290.29-----0.140.140.14-0.14-0.14------1.00----------0.290.71------0.570.57-0.570.570.570.570.570.43---0.14-0.290.290.290.290.29---0.29---0.290.290.29--------0.140.14--0.140.140.14--0.14--0.14------0.140.14-0.14-0.14---0.14-0.14-0.140.140.140.140.14--
....................................................................................................................................AAGGTATTAGAAAAACATC...................................................................................................19414.001.25-14.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCATA..................................................................................................20711.2966.71--2.43-1.14--------------------1.57----0.43--------0.570.29---0.140.140.14-0.14---0.29-0.14---------------------0.57--0.14---0.14------0.14-0.29-0.14------0.290.14-0.290.140.14---0.14-----0.140.14--0.14-------------0.14----0.14----0.14--0.14-0.14-----0.14-
....................................................................................................................................AAGGTATTAGAAAAAACCA...................................................................................................19010.001.00--3.00-3.00---------------1.00-----------------------------------1.00-----------1.00---1.00------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAACA....................................................................................................18010.001.00----5.00-----------------------1.001.00---1.00------1.00---1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCATC..................................................................................................2076.0066.71-5.290.14-0.14--------------------0.14-----------------------------------------------------------------0.14-----------------------------------------0.14-----------------------
...................................................................................................................................CAAGGTATTAGAAAAACC.....................................................................................................185.000.00----------------4.00------------------------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAACAT...................................................................................................1904.001.00--1.00----------------------1.00--1.00-----------------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCAC...................................................................................................1974.0066.71--0.14--------------------------0.140.43------0.14--------------0.71------------------------0.140.290.43---0.14-------0.29--0.14-----0.29----0.14----0.14----------0.14------0.14------------0.14---------------
....................................................................................................................................AAGGTATTAGAAAAACCACC..................................................................................................2072.7166.71----------------0.14-------------0.29------0.43-------------------------------------0.570.140.290.14----0.14---------------------------------------------0.14-0.140.14----------0.14-------------
....................................................................................................................................AAGGTATTAGAAAAACCACA..................................................................................................2072.2966.71--------------------0.57---------0.14---------0.14---0.14-----------0.14------------------0.14-0.290.14---------------------------0.14------------------0.140.14------------------0.14-----------
....................................................................................................................................AAGGTATTAGAAAAAGCAT...................................................................................................1902.001.00--2.00----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAGCA....................................................................................................1802.001.00--1.00---------------------------------------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCAA...................................................................................................1971.4366.71----0.29-----------------------------------------0.14---------------------------------0.57--0.14--------0.14----------------------0.14-----------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACA.....................................................................................................1741.251.25------------0.25----------------------------------0.25---------------------------------------------0.25-----------------0.250.25--------------------------------------------
...................................................................................................................................................................................................................CAACAAATGGTTTACAGG.....................1811.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAACAA...................................................................................................1901.001.00----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................................TGTATTTTAAATGTGCAATAATT.....................................................................................................................................231.000.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................AGGTATTAGAAAAACCATA..................................................................................................191.000.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................TATTTTAAATGTGCAATTCTTTTTT.................................................................................................................................251.000.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACACA...................................................................................................1911.001.00---------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAA.......................................................................................................1501.001.00------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAAAC....................................................................................................1801.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAGGA....................................................................................................1801.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TACAGGACCACAGTTGATT........1911.001.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAAGGTATTAGAAAAACCA....................................................................................................191.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAAAACC...................................................................................................1901.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTTTTCGTTTGCTTTAG....................................................171.000.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................TCATTTTTGTAGTGTTTTT...................................................................................................................191.000.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACTA....................................................................................................1870.5766.71---------------------------------------------0.14--------------------------------------------0.29-----------------------0.14------------------------------------------
............AGTGACCAGTGTTCTCA.............................................................................................................................................................................................................................1720.500.50-------------------------------------------------------------------------0.50-----------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCAAA..................................................................................................2070.4366.71--0.14---------------------------0.14-----------------------------------------------------------------------------------------------------------------------------0.14
....................................................................................................................................AAGGTATTAGAAAAACTAT...................................................................................................1970.2966.71----0.14------------------------------------------------------------------------------------------------------------0.14-------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACGA....................................................................................................1870.2966.71--0.29----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCAGT..................................................................................................2070.2966.71------------------------------0.29------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCCTT..................................................................................................2070.2966.71--0.14-------------------------------------------------------------------------------------------------------------------------------------0.14--------------------
....................................................................................................................................AAGGTATTAGAAAAACCAG...................................................................................................1970.1466.71------------------------------0.14------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACTTTT..................................................................................................2070.1466.71----------------------------0.14--------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCAAG..................................................................................................2070.1466.71--0.14----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCACT..................................................................................................2070.1466.71------------------------------------------------------------------------------------------------------0.14------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCAAC..................................................................................................2070.1466.71------------------------------------------------------------------------------0.14------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACTATT..................................................................................................2070.1466.71----------------------------------------------------0.14--------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACCC....................................................................................................1870.1466.71---------------------------------------------------------------------------------------------------------------------------------------0.14---------------------
....................................................................................................................................AAGGTATTAGAAAAACTATC..................................................................................................2070.1466.71------------------------------0.14------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACGATT..................................................................................................2070.1466.71------------------------------0.14------------------------------------------------------------------------------------------------------------------------------

Antisense strand
AATGGAAAACAGAGTGACCAGTGTTCTCAAACTGGCAGGGTTCGTTCCTGGTGTCTGGAAAGTGAATGAAAGTACGGAAATTAAAGTTAAAAACTGTATTTTAAATGTGCAATTCTTCATTTTTGTAGTGTCAAGGTATTAGAAAAACACATGAATTACATGAATTATAAAGCTTTCTCAATTTTTCGTTTGCTTTTCAGAGAACACGTAACAACAAATGGTTTACAGGACCACAGTTGATTTCCCTTCT
........................................................................................................(((((...((((....(((((......)))))....))))...)))))..................................................................................................
.........................................................................................90..............................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040018(GSM532903)
G701N. (cervix)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR029129(GSM416758)
SW480. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
GSM532890(GSM532890)
G576T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038857(GSM458540)
D20. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
......................GTTCTCAAACTGGCAGTCTG................................................................................................................................................................................................................ 202.000.00------------------------2.00------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................GTTTGCTTTTCAGAGTCAC............................................ 191.000.00-------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACTAC................................................................................................... 1971.000.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................TCTTCATTTTTGTAGTCA....................................................................................................................... 181.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................GCAATTCTTCATTTTTTTA........................................................................................................................... 191.000.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAATTAG................................................................................................... 1901.000.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACTCCA.................................................................................................. 2071.000.00----------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TTTACAGGACCACAGTAA........... 181.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CAACAAATGGTTTACCTA..................... 181.000.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAATTAA................................................................................................... 1901.000.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AAGGTATTAGAAAAACTTA................................................................................................... 1971.000.00---------------------------------------------------------------------1.00---------------------------------------------------------------------------------------