ID: uc001dmz.1_intron_2_0_chr1_89575950_r.3p
GENE: GBP2(8)
chr1:89575900-89576149-


(2)
BRAIN
(2)
BREAST
(6)
CELL-LINE
(2)
CERVIX
(6)
HEART
(2)
LIVER
(1)
OTHER
(8)
SKIN
(1)
TESTES

Sense strand
TTTATCCACTCATTAATTGATGGGCATTTGGGCTCATTCCATATTTTTACAATTGCGAATTGTGCTGCTATAAACATGCGTATGCAAGTATCTTTTTTGTGTAATGACTTATTTTCCTCTGGGTAGATACCCAGTGGTGGGATTGCTGGATCTAACCCACAATCACTCTTTCTTCATTCTACCTTTCTCTGTATAACCAGGCCAAAGAGGTGCTGAAAAAATATTTGGAGTCCAAGGAGGATGTGGCTGA
...................................................................................................................................(((.((((((((((.(((.......))))))))..............))))).....)))...........................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR343337SRR343334SRR040010(GSM532895)
G529N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................GTGGGATTGCTGGATCTCTG..............................................................................................2041.000.0028.00-3.00-2.002.001.00-----1.00---1.00---1.00-----1.001.00------
........................................................................................................................................................................TTTCTTCATTCTACCAATG...............................................................193.000.00-------2.00---1.00----------------------
........................................................................................................................................GTGGGATTGCTGGATCTCTT..............................................................................................201.000.00------1.00---------------------------
................TTGATGGGCATTTGGGCTCTG.....................................................................................................................................................................................................................211.000.00------------------1.00---------------
....................................................TTGCGAATTGTGCTGCTATAAACATGCGG.........................................................................................................................................................................291.000.00----------1.00-----------------------
....................................................................................................................................................................................................................CTGAAAAAATATTTGGAGTCCAAGGAGG..........2811.001.00---------------1.00------------------
......................................................................................................................................................................................................AGGCCAAAGAGGTGCTGAAA................................2011.001.00-------------1.00--------------------
..........................................................................................................................................GGGATTGCTGGATCTCTG..............................................................................................181.000.00------------------------1.00---------
..............................................................................................................................................................................CATTCTACCTTTCTCTGTATAAC.....................................................2311.001.00-----------------1.00----------------
..........................................................ATTGTGCTGCTATAAGTGA.............................................................................................................................................................................191.000.00-----------------------1.00----------
..........................................................................................................................................................................TCTTCATTCTACCTTCAAG.............................................................191.000.00--------1.00-------------------------
................................................................................................................................................................................................................................TTGGAGTCCAAGGAGGATGTGGC...2311.001.00---------1.00------------------------
...................................................................................................................................CAGTGGTGGGATTGCTGGCTC..................................................................................................211.000.00---------------------1.00------------
....................................................................................................................................................................ACTCTTTCTTCATTCTACC...................................................................1911.001.00----------------------------1.00-----
..............................................................................................................................................TTGCTGGATCTAACCATGT.........................................................................................191.000.00--------------1.00-------------------
....................................................................................................GTAATGACTTATTTTAACC...................................................................................................................................191.000.00---1.00------------------------------
...............................................................................................................................................................................................................................TTTGGAGTCCAAGGAGGATGTGGCT..2511.001.00---1.00------------------------------
............................................................................................................................................................................................................AAGAGGTGCTGAAAAAA.............................1720.500.50------------------------------0.50---
.......................................................................................................................................................................................................................................CCAAGGAGGATGTGGC...1630.330.33--------------------------------0.33-
........................CATTTGGGCTCATTCCATATT.............................................................................................................................................................................................................2130.330.33-------------------------------0.33--
......................................................................................................................................................................................................................GAAAAAATATTTGGAGT...................1780.120.12---------------------------------0.12

Antisense strand
TTTATCCACTCATTAATTGATGGGCATTTGGGCTCATTCCATATTTTTACAATTGCGAATTGTGCTGCTATAAACATGCGTATGCAAGTATCTTTTTTGTGTAATGACTTATTTTCCTCTGGGTAGATACCCAGTGGTGGGATTGCTGGATCTAACCCACAATCACTCTTTCTTCATTCTACCTTTCTCTGTATAACCAGGCCAAAGAGGTGCTGAAAAAATATTTGGAGTCCAAGGAGGATGTGGCTGA
...................................................................................................................................(((.((((((((((.(((.......))))))))..............))))).....)))...........................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR343337SRR343334SRR040010(GSM532895)
G529N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
....................................................................TATAAACATGCGTATGCGA................................................................................................................................................................... 197.000.00-7.00--------------------------------
...........................................................TTGTGCTGCTATAAACATGCGTATGCCCG.................................................................................................................................................................. 291.000.00-----------------------------1.00----
....................................................................TATAAACATGCGTATGCTA................................................................................................................................................................... 191.000.00-1.00--------------------------------
.................................................................................................................................CCCAGTGGTGGGATTAGGC...................................................................................................... 191.000.00-------------------1.00--------------
.....................................................................ATAAACATGCGTATGGCCA.................................................................................................................................................................. 191.000.00-1.00--------------------------------
....................................................................TATAAACATGCGTATGCAC................................................................................................................................................................... 191.000.00-1.00--------------------------------
..............................................................................................................................................................................TGGTTATACAGAGAAAGGTAGAATG................................................... 2511.001.00-------------------------1.00--------
.........................................................................................................................................................................TTCTTCATTCTACCTTTTAT............................................................. 201.000.00----------------------1.00-----------
........................................................................................................................................................................TACAGAGAAAGGTAGAATGAAGAAA......................................................... 2511.001.00---1.00------------------------------
...................................................................................GCAAGTATCTTTTTTGTCGTT.................................................................................................................................................. 211.000.00-1.00--------------------------------