ID: uc001dms.2_intron_0_0_chr1_89449750_r.5p
GENE: (1)
chr1:89458068-89458317-


(1)
AGO2.ip 		(15)
B-CELL 		(2)
BRAIN 		(19)
BREAST 		(38)
CELL-LINE 		(13)
CERVIX 		(6)
HEART 		(4)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(21)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
AGCCCAGTCGGGACTCGAGCCTAGGGAGGCGAGGTTCCCGCACCGGATAGGTGAGTGGGGCGGGCGCGCGGCGCGGCGCGGCGCTTCCGTGCGGACTGACTAGGGCCGTCCCGGCGTACGGGGCGAGGGAACGGAGGTCGGGCTCCTCTTGCCGGAGTCGCTGCGGGGCCGCCTGCGGGGGTGGCTGCAGGGAGTCGGCCCTAGATTAGCAGTTTGAGGGGAAGGCGCCGAGGTGACTGGCCTCCAGGGG
...........................................................(((((.((((.(((...))).)))).)))))((((.((.....)).)))).............................................................................................................................................
..................................................51.........................................................110..........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040016(GSM532901)
G645N. (cervix)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR040007(GSM532892)
G601T. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		GSM532883(GSM532883)
G871N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR189783GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		GSM532884(GSM532884)
G871T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR040017(GSM532902)
G645T. (cervix)		SRR040033(GSM532918)
G603T. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR040012(GSM532897)
G648N. (cervix)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
.........................................ACCGGATAGGTGAGTGGGG..............................................................................................................................................................................................19132.0032.0011.004.003.00----3.00-----------3.00--------1.00-------------------------------1.00--------------------1.00--1.00------------------------1.00---------1.00---------1.00-1.00--
...........................................CGGATAGGTGAGTGGGGC.............................................................................................................................................................................................18116.0016.003.00--2.00--1.00--1.00-1.00-1.00------------------1.00------------1.001.00-----------------------1.00---------1.00-------------------------------------1.00-------------1.00-
........................................................................................GTGCGGACTGACTAGGGC................................................................................................................................................18111.0011.006.00--1.00--------------1.00---1.00------1.00-------------------------------------------1.00------------------------------------------------------------
.........................................ACCGGATAGGTGAGTGGG...............................................................................................................................................................................................18110.0010.00-2.002.00---3.00--1.00---1.00-----------------------1.00------------------------------------------------------------------------------------------------
.........................................ACCGGATAGGTGAGTGGGGCG............................................................................................................................................................................................2117.007.00-4.00--------------------------1.00--------------1.00------------------------1.00-----------------------------------------------------------------
...........................................CGGATAGGTGAGTGGGGCGGG..........................................................................................................................................................................................2117.007.00--------1.00---1.00---------1.00------------1.00----------------------------------------------------------1.00----------------------------1.00---------1.00
..............................................ATAGGTGAGTGGGGCGGG..........................................................................................................................................................................................1816.006.00-------1.00---------------1.00------1.00---------1.00------------------------------------------------------1.00---------1.00----------------------------
........................................................................................................................GGGCGAGGGAACGGAGGT................................................................................................................1814.004.00-------2.00----------1.00---------------------------------------------------------------------------------------------------------1.00---------
.............................................................................................................CCCGGCGTACGGGGCGAGGGAACGG....................................................................................................................2514.004.00--------2.00--------------2.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................GGGCGAGGGAACGGAGGTCGG.............................................................................................................2114.004.00---------------4.00----------------------------------------------------------------------------------------------------------------------
.........GGGACTCGAGCCTAGGGAGGC............................................................................................................................................................................................................................2114.004.002.00----------1.00----------------------------------------------------------------------------1.00---------------------------------------------
.........GGGACTCGAGCCTAGGGAG..............................................................................................................................................................................................................................1914.004.00-------1.00-----2.00------------------------------------------1.00-----------------------------------------------------------------------------
........CGGGACTCGAGCCTAGGGAGGCG...........................................................................................................................................................................................................................2314.004.00------------1.00-------------------------------------2.00---------------------------------------------------------------------1.00-------------
.........GGGACTCGAGCCTAGGGAGG.............................................................................................................................................................................................................................2014.004.00-----------1.00------------1.00--------1.00-----1.00----------------------------------------------------------------------------------------------
..............................................................................................ACTGACTAGGGCCGTCCCGG........................................................................................................................................2014.004.00--3.00-------------------------------------------------1.00---------------------------------------------------------------------------------
.....................................................................................TCCGTGCGGACTGACTAGGGC................................................................................................................................................2114.004.003.00--------------------------------------1.00----------------------------------------------------------------------------------------------
...........................................CGGATAGGTGAGTGGGG..............................................................................................................................................................................................1713.003.00-3.00------------------------------------------------------------------------------------------------------------------------------------
................................................................................................TGACTAGGGCCGTCCCGG........................................................................................................................................1813.003.00---1.00-2.00--------------------------------------------------------------------------------------------------------------------------------
.........................................ACCGGATAGGTGAGTGGGGCGGG..........................................................................................................................................................................................2313.003.00---------------------1.00------------------------------------------------------1.00---------------1.00-----------------------------------------
......................AGGGAGGCGAGGTTCCCG..................................................................................................................................................................................................................1813.003.00-------------------------2.00---------------------------------------------1.00--------------------------------------------------------------
..........................................CCGGATAGGTGAGTGGGG..............................................................................................................................................................................................1813.003.00-------------------------1.00----------------2.00-------------------------------------------------------------------------------------------
........CGGGACTCGAGCCTAGGGAGGCGAGG........................................................................................................................................................................................................................2613.003.00--------------------1.00---------1.00----------------------------------------------------------1.00--------------------------------------------
...........................................CGGATAGGTGAGTGGGGCG............................................................................................................................................................................................1913.003.00-1.00--------------------------------------------1.00-----------------------------------1.00---------------------------------------------------
..............TCGAGCCTAGGGAGGCGAGGTTCCC...................................................................................................................................................................................................................2513.003.00--------------------------3.00-----------------------------------------------------------------------------------------------------------
..............................................................GGCGCGCGGCGCGGCTGGA.........................................................................................................................................................................193.000.00----3.00---------------------------------------------------------------------------------------------------------------------------------
.........................................ACCGGATAGGTGAGTGGGGC.............................................................................................................................................................................................2013.003.002.00-----1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................GGGCGCGCGGCGCGGCTGGA.........................................................................................................................................................................203.000.00----1.00-------------------1.00-----------------------------1.00-------------------------------------------------------------------------------
...........................................CGGATAGGTGAGTGGGGCGGGCG........................................................................................................................................................................................2313.003.00-------------------------------------1.001.00----------------------------------------------------------1.00------------------------------------
................................................................................................................GGCGTACGGGGCGAGGGAA.......................................................................................................................1912.002.00--------2.00-----------------------------------------------------------------------------------------------------------------------------
.....................TAGGGAGGCGAGGTTCCC...................................................................................................................................................................................................................1812.002.00----------------------------------------------------------------1.00-------------------------------------------------1.00-------------------
..........................................................................................GCGGACTGACTAGGGCC...............................................................................................................................................1712.002.00-----1.00--------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................GTGAGTGGGGCGGGCGCG......................................................................................................................................................................................1812.002.00------------------------------------------------1.00-----------------1.00-------------------------------------------------------------------
.........GGGACTCGAGCCTAGGGAGGCGAG.........................................................................................................................................................................................................................2412.002.00----------2.00---------------------------------------------------------------------------------------------------------------------------
..............................................................GGCGCGCGGCGCGGCTGTA.........................................................................................................................................................................192.000.00----2.00---------------------------------------------------------------------------------------------------------------------------------
........CGGGACTCGAGCCTAGGGAGGCGAGGT.......................................................................................................................................................................................................................2712.002.00---1.00-------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CGGAGGTCGGGCTCCTCTTGC..................................................................................................2112.002.00--1.00-----------------------------------------------------------------------------------------------------------------------1.00-----------
....................CTAGGGAGGCGAGGTTCCCGCACC..............................................................................................................................................................................................................2412.002.00-----------------------------------------------------2.00--------------------------------------------------------------------------------
................................................................................GCGCTTCCGTGCGGACTGA.......................................................................................................................................................1912.002.00-------------------1.00----------------------------------------------------------------------------------1.00-------------------------------
..................................................................................................................................ACGGAGGTCGGGCTCCTCTTGCCGGAGTCGC.........................................................................................3112.002.00---2.00----------------------------------------------------------------------------------------------------------------------------------
..............TCGAGCCTAGGGAGGCGAG.........................................................................................................................................................................................................................1912.002.00---------------------------------1.00-------------1.00--------------------------------------------------------------------------------------
..........................................................................................GCGGACTGACTAGGGC................................................................................................................................................1612.002.00-----2.00--------------------------------------------------------------------------------------------------------------------------------
................................................................................GCGCTTCCGTGCGGACTGACTA....................................................................................................................................................2212.002.00----------------2.00---------------------------------------------------------------------------------------------------------------------
...........GACTCGAGCCTAGGGAGGCGAGGGT......................................................................................................................................................................................................................252.000.00----------2.00---------------------------------------------------------------------------------------------------------------------------
.............................................GATAGGTGAGTGGGGCGGG..........................................................................................................................................................................................1912.002.00-1.00--------------------------------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................GTCGGGCTCCTCTTGCCGG...............................................................................................1912.002.00-2.00------------------------------------------------------------------------------------------------------------------------------------
.........................................................................CGGCGCGGCGCTTCCGTGCGGACTGACTAGGGC................................................................................................................................................3312.002.00-----------------------------------------2.00--------------------------------------------------------------------------------------------
..........................................CCGGATAGGTGAGTGGGGC.............................................................................................................................................................................................1912.002.00---------1.00------------------------------------------------------------------------------------------1.00---------------------------------
........CGGGACTCGAGCCTAGGGAGG.............................................................................................................................................................................................................................2112.002.00-1.00-----------------------------------------------1.00------------------------------------------------------------------------------------
........................................................................................GTGCGGACTGACTAGGGCC...............................................................................................................................................1912.002.001.001.00------------------------------------------------------------------------------------------------------------------------------------
........................GGAGGCGAGGTTCCCGCACCGGT...........................................................................................................................................................................................................232.000.00---------------------------2.00----------------------------------------------------------------------------------------------------------
.................................................................................................................GCGTACGGGGCGAGGGAA.......................................................................................................................1811.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------
............................................GGATAGGTGAGTGGGGCGGG..........................................................................................................................................................................................2011.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------
....CAGTCGGGACTCGAGC......................................................................................................................................................................................................................................1611.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................GGGAACGGAGGTCGGGCT..........................................................................................................1811.001.00----------------------------------------------------------1.00---------------------------------------------------------------------------
..............................................................................................................................................................CGCTGCGGGGCCGCCGC...........................................................................171.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................GCGCGGCGCGGCGCGGCGATA....................................................................................................................................................................211.000.00--------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................ACGGGGCGAGGGAACGGAGGCCGG.............................................................................................................2411.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................GGCGTACGGGGCGAGG..........................................................................................................................1611.001.00------------------------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................GGCGCGGCGCTTCCGAGGC.............................................................................................................................................................191.000.00------------------------------------------------------------------------------1.00-------------------------------------------------------
..........................AGGCGAGGTTCCCGCACCGG............................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------------------------------------------1.00---------------------
...................CCTAGGGAGGCGAGGTTCCCGCACCGGATAGAA......................................................................................................................................................................................................331.000.00-------------------------------------------------------------------------------------1.00------------------------------------------------
...........................................CGGATAGGTGAGTGGGGCGGGC.........................................................................................................................................................................................2211.001.00---------------------------------------------1.00----------------------------------------------------------------------------------------
.........................................ACCGGATAGGTGAGTGG................................................................................................................................................................................................1711.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TGACTGGCCTCCAGGGGCGA201.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
..........................................................................GGCGCGGCGCTTCCGTGCGGACTGACTAGGGC................................................................................................................................................3211.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGCGCGGCGCGGCGCTTCCGT................................................................................................................................................................2111.001.00------------------------------------------------------------------------1.00-------------------------------------------------------------
..................GCCTAGGGAGGCGAGGTT......................................................................................................................................................................................................................1811.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------
..................GCCTAGGGAGGCGAGGTG......................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------1.00-----------------------------------------------------------
.......................GGGAGGCGAGGTTCC....................................................................................................................................................................................................................1511.001.00-----------------------------------------------------------------------------------------------------------------1.00--------------------
......................................................................................................................................................GCCGGAGTCGCTGCGGGGC.................................................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
................................................AGGTGAGTGGGGCGGGC.........................................................................................................................................................................................1721.001.00---------0.50---------------------0.50------------------------------------------------------------------------------------------------------
.......TCGGGACTCGAGCCTAGGGAGGCGAGGTTC.....................................................................................................................................................................................................................3011.001.00---------------------------1.00----------------------------------------------------------------------------------------------------------
......................AGGGAGGCGAGGTTCCCGCACTGT............................................................................................................................................................................................................241.000.00---------------------------------------------------------------------------1.00----------------------------------------------------------
.........................................................................................TGCGGACTGACTAGGGCCG..............................................................................................................................................1911.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------
......................................................................GCGCGGCGCGGCGCTTCCGTGCGGACTGA.......................................................................................................................................................2911.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................AGGGCCGTCCCGGCGTACG..................................................................................................................................1911.001.00------1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................GCGTACGGGGCGAGGGAACGGAGGTCGGG............................................................................................................2911.001.00-------------------------------------------------------------------------------------------------------------------------1.00------------
.............................................GATAGGTGAGTGGGGCGGGAT........................................................................................................................................................................................2111.002.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................GACTAGGGCCGTCCCGGCGTA....................................................................................................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
......GTCGGGACTCGAGCCTAGGGAGGCGAGGT.......................................................................................................................................................................................................................2911.001.00-------------------------------------------------------------------------------------------------------1.00------------------------------
........CGGGACTCGAGCCTAGGGAGGCGAG.........................................................................................................................................................................................................................2511.001.00----------------------------------1.00---------------------------------------------------------------------------------------------------
...........................................CGGATAGGTGAGTGGGGCGGGCGCGCGGCG.................................................................................................................................................................................3011.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------
......................................................................................CCGTGCGGACTGACTAGGGC................................................................................................................................................2011.001.001.00-------------------------------------------------------------------------------------------------------------------------------------
..................................TTCCCGCACCGGATAGG.......................................................................................................................................................................................................1711.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------
....................................CCCGCACCGGATAGGGC.....................................................................................................................................................................................................171.000.00-------------------------------1.00------------------------------------------------------------------------------------------------------
.........GGGACTCGAGCCTAGGGA...............................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------------
...................CCTAGGGAGGCGAGGTTC.....................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------------------1.00---------------------------
.................................................................................................................................................................................................................................CGCCGAGGTGACTGG..........1511.001.00--------------------------------------------------------------1.00-----------------------------------------------------------------------
..............................................................................................ACTGACTAGGGCCGTCCCGGCG......................................................................................................................................2211.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................TGACTAGGGCCGTCCCG.........................................................................................................................................1711.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................CGCGGCGCGGCGCTTCC..................................................................................................................................................................1711.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GCGGACTGACTAGGGCCG..............................................................................................................................................1811.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
............................................GGATAGGTGAGTGGGGCGG...........................................................................................................................................................................................1911.001.00-----------------------------------------------------------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................................TTGAGGGGAAGGCGCCGAG..................1911.001.00--------------------------------1.00-----------------------------------------------------------------------------------------------------
..CCCAGTCGGGACTCGAGCCTAGGGAGGC............................................................................................................................................................................................................................2811.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................TGCGGGGGTGGCTGCTGCG..........................................................191.000.00-------------------------------------------------------------1.00------------------------------------------------------------------------
............ACTCGAGCCTAGGGAGGC............................................................................................................................................................................................................................1811.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------
..............................................................GGCGCGCGGCGCGGCGCGGC........................................................................................................................................................................2021.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
...CCAGTCGGGACTCGAGCCTAGGGAGGC............................................................................................................................................................................................................................2711.001.00--------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................AGGTTCCCGCACCGGATAG........................................................................................................................................................................................................1911.001.00-------------1.00------------------------------------------------------------------------------------------------------------------------
.......................................GCACCGGATAGGTGAGTGGGGCG............................................................................................................................................................................................2311.001.00------------------------------1.00-------------------------------------------------------------------------------------------------------
.............CTCGAGCCTAGGGAGGCGAGG........................................................................................................................................................................................................................2111.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------
..................GCCTAGGGAGGCGAGGTTC.....................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------------------------------------1.00--------
..................................................................................................ACTAGGGCCGTCCCGGC.......................................................................................................................................1711.001.00-----------------------------------------------------------1.00--------------------------------------------------------------------------
.....................................................................................................................ACGGGGCGAGGGAACGGAGGTCG..............................................................................................................2311.001.00-----------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CGGAGGTCGGGCTCCTCTTGCCGGAGTCGC.........................................................................................3011.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................ACGGGGCGAGGGAACGGAGG.................................................................................................................2011.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.........................GAGGCGAGGTTCCCGCACCGGATAGGCG.....................................................................................................................................................................................................281.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................CTGACTAGGGCCGTCCCGGCGT.....................................................................................................................................2211.001.00------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................TACGGGGCGAGGGAACGGAGGTCGGGCCCC........................................................................................................301.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................CCGGATAGGTGAGTGGGGCGG...........................................................................................................................................................................................2111.001.00------1.00-------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AGATTAGCAGTTTGAGGGG.............................1911.001.00--------------------------------------------------------------------------------------1.00-----------------------------------------------
........CGGGACTCGAGCCTAGGGAGGCGA..........................................................................................................................................................................................................................2411.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------
........CGGGACTCGAGCCTAGGCAGG.............................................................................................................................................................................................................................211.000.00---------------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................AACGGAGGTCGGGCTCCTCTTGCCGGAGTCGC.........................................................................................3211.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------
........CGGGACTCGAGCCTAGGGAGGC............................................................................................................................................................................................................................2211.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------
.....AGTCGGGACTCGAGCCTAGGGAGGCG...........................................................................................................................................................................................................................2611.001.00---------------------------------------------------------------1.00----------------------------------------------------------------------
............ACTCGAGCCTAGGGAGGCGAGG........................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------------1.00------------------------------------------------------
.............................................................GGGCGCGCGGCGCGGCTGGC.........................................................................................................................................................................201.000.00---------------------------------------------------------1.00----------------------------------------------------------------------------
...........GACTCGAGCCTAGGGAGGCGAGGTT......................................................................................................................................................................................................................2511.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................CGCGGCGCGGCGCTTCCGTGCGGACTGACTAGGGC................................................................................................................................................3511.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGCGCGCGGCGCGCGG............................................................................................................................................................................181.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................CGCGGCGCGGCGCTTCCGTGCGGACTGACTAGGG.................................................................................................................................................3411.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------
.......................GGGAGGCGAGGTTCCCGC.................................................................................................................................................................................................................1811.001.00-----------------------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................ACGGGGCGAGGGAACGGAGGT................................................................................................................2111.001.00------------------------------------1.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CGGGGGTGGCTGCAGGGAG........................................................1911.001.00--------------------------------------------------------------------------------------------------------------------1.00-----------------
..................................................................................................ACTAGGGCCGTCCCGGCGTAC...................................................................................................................................2111.001.00---------------------------------------------------------------------1.00----------------------------------------------------------------
.........................................ACCGGATAGGTGAGTGGGGCGGGCGCG......................................................................................................................................................................................2711.001.00-----------------------------------------------------------------------------------------------------1.00--------------------------------
.............................................................................................GACTGACTAGGGCCGTCCCG.........................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------------------1.00----------------
.............................................................................................................................................................................................................................AAGGCGCCGAGGTGACTGGCCCCC.....241.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................TACGGGGCGAGGGAACGG....................................................................................................................1811.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
..........................AGGCGAGGTTCCCGCACCGGTC..........................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------1.00------------------------------------------------------------------
......................AGGGAGGCGAGGTTCCCGCACCG.............................................................................................................................................................................................................2311.001.00-------------------------------------------------------1.00------------------------------------------------------------------------------
...........................................CGGATAGGTGAGTGGGGCA............................................................................................................................................................................................1911.0016.00-----------------------------------------------------------------------------------------------------------1.00--------------------------
...........GACTCGAGCCTAGGGAGGCGAGGCT......................................................................................................................................................................................................................251.000.00----------1.00---------------------------------------------------------------------------------------------------------------------------
....CAGTCGGGACTCGAGCCTAGGGAGGCGAG.........................................................................................................................................................................................................................2911.001.00--------------------------------------------------------------------------------------------------------1.00-----------------------------
............ACTCGAGCCTAGGGAGGCGAGGT.......................................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------------1.00--------------------------------------------------
................................................................................................................................GAACGGAGGTCGGGCTCC........................................................................................................1811.001.00----------------------------------------------------1.00---------------------------------------------------------------------------------
.............................................GATAGGTGAGTGGGGCGG...........................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------------1.00-------------------------------------
........................................CACCGGATAGGTGAGTGGGGCGGGCGC.......................................................................................................................................................................................2711.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------
..........................................CCGGATAGGTGAGTGGGGCG............................................................................................................................................................................................2011.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................GAACGGAGGTCGGGCTCCTCTTGC..................................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................CCCTAGATTAGCAGTTTGAGGGGAAGGCGCCGAGG.................3511.001.00-------------------------------------------------------------------------------------------------------------------------------1.00------
...............................................................GCGCGCGGCGCGGCGCGGCGCTTCCGTGCGGACTGACTAGGGC................................................................................................................................................4311.001.00--------------------------------------------1.00-----------------------------------------------------------------------------------------
..........GGACTCGAGCCTAGGGAGG.............................................................................................................................................................................................................................1911.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................ACGGGGCGAGGGAACGGAGGTCGGGCCC.........................................................................................................281.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................................GCGTACGGGGCGAGGGAACG.....................................................................................................................2011.001.00------------------------------------------------------------------------------------------1.00-------------------------------------------
.........GGGACTCGAGCCTAGGGAGGCG...........................................................................................................................................................................................................................2211.001.00----------------------------------1.00---------------------------------------------------------------------------------------------------
.................................................................................................GACTAGGGCCGTCCCGGC.......................................................................................................................................1811.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------
.........GGGACTCGAGCCTAGGG................................................................................................................................................................................................................................1711.001.00-----------------------------------1.00--------------------------------------------------------------------------------------------------
........................................................................................GTGCGGACTGACTAGGGCCG..............................................................................................................................................2011.001.001.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................TCCGTGCGGACTGACTAGGGCCGTCCCGGCGTA....................................................................................................................................3311.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------
..........................AGGCGAGGTTCCCGCAC...............................................................................................................................................................................................................1711.001.00---------------------------------------------------------------------------------------------------1.00----------------------------------
........................................................................................GTGCGGACTGACTAGGGCAA..............................................................................................................................................2011.0011.00----------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................CGTACGGGGCGAGGGAACGGAGG.................................................................................................................2311.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------
...........................................CGGATAGGTGAGTGGGGCGG...........................................................................................................................................................................................2011.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------
............ACTCGAGCCTAGGGAGGCGAGGTT......................................................................................................................................................................................................................2411.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-----
........................................................................................GTGCGGACTGACTAGGGCCGTCCCG.........................................................................................................................................2511.001.00--------------------------------------------------------------------------------------------------------------1.00-----------------------
.......TCGGGACTCGAGCCTAGGGAGGCGAGG........................................................................................................................................................................................................................2711.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------
............................................................................................GGACTGACTAGGGCCGTCCCGGCGTC....................................................................................................................................261.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------
...................CCTAGGGAGGCGAGGTT......................................................................................................................................................................................................................1711.001.00---------------------------------------------------------------------------------------------1.00----------------------------------------
..............................................................................CGGCGCTTCCGTGCGGACTGA.......................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------------------1.00-----------------------------------
.........................................................................CGGCGCGGCGCTTCCGTGCGGACTGACTAGGGCCGTCCCGGCGTACGGGGCGAG...........................................................................................................................5411.001.00----------------------------------------------------------------------------------------------------------------------------------1.00---
..................................................GTGAGTGGGGCGGGCGCGCGGCGCGG..............................................................................................................................................................................2611.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................ACGGGGCGAGGGAACGGA...................................................................................................................1811.001.00-------------------------------------------------------1.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TGACTGGCCTCCAGGGGGGC201.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TGACTGGCCTCCAGGGTGGA201.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
.............................CGAGGTTCCCGCACCGGAT..........................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------1.00------------------
..............................................................GGCGCGCGGCGCGGCTGGG.........................................................................................................................................................................191.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------
..............................................................GGCGCGCGGCGCGGCGGGT.........................................................................................................................................................................191.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CCCGGCGTACGGGGCGAGGGAACGGAGGT................................................................................................................2911.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................AGGGCCGTCCCGGCG......................................................................................................................................1520.500.50--------------------0.50-----------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGCGGGCGCG......................................................................................................................................................................................1720.500.50-0.50------------------------------------------------------------------------------------------------------------------------------------
..........................................................GGCGGGCGCGCGGCGCG...............................................................................................................................................................................1740.250.25---------0.25----------------------------------------------------------------------------------------------------------------------------
...............................................................GCGCGCGGCGCGGCGCG..........................................................................................................................................................................1770.140.14----0.14---------------------------------------------------------------------------------------------------------------------------------

Antisense strand
AGCCCAGTCGGGACTCGAGCCTAGGGAGGCGAGGTTCCCGCACCGGATAGGTGAGTGGGGCGGGCGCGCGGCGCGGCGCGGCGCTTCCGTGCGGACTGACTAGGGCCGTCCCGGCGTACGGGGCGAGGGAACGGAGGTCGGGCTCCTCTTGCCGGAGTCGCTGCGGGGCCGCCTGCGGGGGTGGCTGCAGGGAGTCGGCCCTAGATTAGCAGTTTGAGGGGAAGGCGCCGAGGTGACTGGCCTCCAGGGG
...........................................................(((((.((((.(((...))).)))).)))))((((.((.....)).)))).............................................................................................................................................
..................................................51.........................................................110..........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040016(GSM532901)
G645N. (cervix)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR040007(GSM532892)
G601T. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		GSM532883(GSM532883)
G871N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR189783GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		GSM532884(GSM532884)
G871T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR040017(GSM532902)
G645T. (cervix)		SRR040033(GSM532918)
G603T. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR040012(GSM532897)
G648N. (cervix)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM359189(GSM359189)
HepG2_2pm_3. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
..................................................................................................................................................................................................ACTGCTAATCTAGGGCCGA..................................... 1911.001.00-------------------------------------------------------------------------------------------1.00------------------------------------------
..............................................................................................................................GGGAACGGAGGTCGGGACGA........................................................................................................ 201.000.00------------------------------------------------------------------------------------------------------------------------------1.00-------
..............................................................................................................................GGGAACGGAGGTCGGCCC.......................................................................................................... 181.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................GCCGCGCCGCGCCGCG........................................................................................................................................................................ 1601.001.00------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CGGAGGTCGGGCTCCGGT..................................................................................................... 181.000.00---------------------------------------------------------------------------------------------------------------1.00----------------------
.............................................................................................................................................GCTCCTCTTGCCGGATGC........................................................................................... 181.000.00---------------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................CTAGTCAGTCCGCACGGAAGCG................................................................................................................................................... 2211.001.00-----------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................................CGCGGCGCGGCGCGGCGGGCC................................................................................................................................................................... 211.000.00------------------------------------------------------1.00-------------------------------------------------------------------------------
...................................................................................................CTAGGGCCGTCCCGGCGGG.................................................................................................................................... 191.000.00---------------------------------------------------------------------------------------1.00----------------------------------------------
...............................................................GCGCGCGGCGCGGCGGCG......................................................................................................................................................................... 181.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................TCCGTGCGGACTGACTAGCGCG............................................................................................................................................... 221.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................TCTTGCCGGAGTCGCTAGC..................................................................................... 191.000.00------------------------------------------------------------------------------------------------------------1.00-------------------------
.................................................................................................................................................CGACTCCGGCAAGAG.......................................................................................... 1520.500.50--------------------------------------------------------0.50-----------------------------------------------------------------------------