ID: uc001dll.1_intron_5_0_chr1_86824575_r.5p
GENE: (12)
chr1:86825909-86826158-


(1)
AGO2.ip
(2)
BREAST
(7)
CELL-LINE
(1)
LIVER
(5)
OTHER
(2)
SKIN

Sense strand
AAGAAGTAGAAAAAAAACAGAAAACCCTTATTGAAATGTATAAAACTCAGGTGACTACTGCATTTATTTTAGTGTTTACTAAAATTGGTAGACAATTTAAAACACTATTTCTTTGTAATCTAAATAAATAGAACTGAAGAGAGGTGGGGCTATCATTGTGGGTTATAATATGGTGTGTCTCAAATATTTCTTAAGGTCCCACACATCTTTATAAATAGATGATTCTGCTGATTCCTGATTCAAACACTGC
........................................................................................................((((((((((....((((......)))).....)))))))))).......................................................................................................
................................................................................................97......................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR343335TAX577579(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
.....................................................................................................ACACTATTTCTTTGTACTG..................................................................................................................................19112.000.0088.0016.00-6.00-1.00--1.00--------
.....................................................................................................ACACTATTTCTTTGTACTT..................................................................................................................................192.000.002.00----------------
..................................................................................................................GTAATCTAAATAAATAGAACTGAAGAGAGGT.........................................................................................................3111.001.00-------1.00---------
....................................................................................................AACACTATTTCTTTGTACTG..................................................................................................................................201.000.001.00----------------
..............................................................................................ATTTAAAACACTATTTACT.........................................................................................................................................191.000.00------------1.00----
.AGAAGTAGAAAAAAAACAGAAAACC................................................................................................................................................................................................................................2511.001.00-----------1.00-----
.................................................................................................................................AGAACTGAAGAGAGGTGCAG.....................................................................................................201.000.00----1.00------------
............................................................................TACTAAAATTGGTAGC..............................................................................................................................................................161.000.00---------------1.00-
............................................................CATTTATTTTAGTGTACC............................................................................................................................................................................181.000.00-------------1.00---
.....................................................................................................ACACTATTTCTTTGTACTA..................................................................................................................................191.000.001.00----------------
.........................................................................................................................................AGAGAGGTGGGGCTAAGG...............................................................................................181.000.00------1.00----------
..............................................................................................................................................................TGGGTTATAATATGG.............................................................................1590.110.11----------------0.11

Antisense strand
AAGAAGTAGAAAAAAAACAGAAAACCCTTATTGAAATGTATAAAACTCAGGTGACTACTGCATTTATTTTAGTGTTTACTAAAATTGGTAGACAATTTAAAACACTATTTCTTTGTAATCTAAATAAATAGAACTGAAGAGAGGTGGGGCTATCATTGTGGGTTATAATATGGTGTGTCTCAAATATTTCTTAAGGTCCCACACATCTTTATAAATAGATGATTCTGCTGATTCCTGATTCAAACACTGC
........................................................................................................((((((((((....((((......)))).....)))))))))).......................................................................................................
................................................................................................97......................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR343335TAX577579(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
............AAAAACAGAAAACCCTGTTT.......................................................................................................................................................................................................................... 202.000.00--2.00--------------
............AAAAACAGAAAACCCTTATCGC........................................................................................................................................................................................................................ 221.000.00--1.00--------------
...........AAAAAACAGAAAACCCTGTCT.......................................................................................................................................................................................................................... 211.000.00----1.00------------
.........AAAAAAAACAGAAAACCCTTTTTT......................................................................................................................................................................................................................... 241.000.00----1.00------------
...............................................................................................................................................................GGGTTATAATATGGTCTGG........................................................................ 191.000.00---------1.00-------
..........AAAAAAACAGAAAACCCTGCTT.......................................................................................................................................................................................................................... 221.000.00--1.00--------------
...........AAAAAACAGAAAACCCTGC............................................................................................................................................................................................................................ 191.000.00--1.00--------------
...........AAAAAACAGAAAACCCTCCAG.......................................................................................................................................................................................................................... 211.000.00--1.00--------------
.........AAAAAAAACAGAAAACCTAAC............................................................................................................................................................................................................................ 211.000.00----1.00------------
.........AAAAAAAACAGAAAACCCTTTCTC......................................................................................................................................................................................................................... 241.000.00--1.00--------------
..........AAAAAAACAGAAAACCCTCTC........................................................................................................................................................................................................................... 211.000.00--1.00--------------
...............................................................................................................................ATAGAACTGAAGAGAAGTC........................................................................................................ 191.000.00-----1.00-----------
.........................................................................................................................................................................................................................................CCTGATTCAAACACTGG 171.000.00----------1.00------
.........AGGGTTTTCTGTTTTTTTT.............................................................................................................................................................................................................................. 1950.200.20--0.20--------------
.........AAAAAAAACAGAAAACCCTTAGC.......................................................................................................................................................................................................................... 230.200.00--0.20--------------