ID: uc001dgt.2_intron_3_0_chr1_75679675_r.3p
GENE: SLC44A5(20)
chr1:75679625-75679874-


(1)
BREAST
(7)
CELL-LINE
(3)
HEART
(2)
OTHER
(2)
SKIN

Sense strand
CAATGCCATCTTCTGTTTACATTAAAAATAAGTCAGAACATCATCCATGAGTTCCACCATCATTTCTTGCAAAACAATTGCCAAATACAATTTCAGCAAAGACACACCAAAATAAACTCATGAAAATTTACTGCCATAAATTTCAAGTACCAAGTATATTTTAAACACAGAATTATACTTTCTTTTTTTCTGATACTCAGAGTTGCAGTTACAGATGAAGTTACATACTTTGTATTATTCCTGGGGAAAC
.....................................................................................................................(((.(((((..((((.............))))..(((((((.(((.......))).))))))).....)))))))).........................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................................................TATACTTTCTTTTTTTTTTG.........................................................2038.000.0021.009.006.00-2.00----------
.....................................................................................................................................................................CACAGAATTATACTTGTG...................................................................183.000.00---3.00-----------
.....................................................................................................................................................................CACAGAATTATACTTTTG...................................................................182.000.00---2.00-----------
................................................................................................................................................................................ACTTTCTTTTTTTCTACC........................................................181.000.00------1.00--------
..............................................................................................................................................................................ATACTTTCTTTTTTTCTCTG........................................................201.000.00----1.00----------
..........................................................................................................................................................................AATTATACTTTCTTTTTTTTC...........................................................211.000.00------1.00--------
.....................................................................................................................................................................CACAGAATTATACTTTCG...................................................................181.000.00---1.00-----------
.............................................................................................................................................................................TATACTTTCTTTTTTTTGG..........................................................191.000.00---------1.00-----
.............................................................................................................................................................................TATACTTTCTTTTTTTCTTTTG.......................................................221.000.00--1.00------------
..............................................................................................................................................................................ATACTTTCTTTTTTTCTCTT........................................................201.000.00---------1.00-----
.............................................................................................................................................................................TATACTTTCTTTTTTTTAG..........................................................191.000.00-1.00-------------
...........TCTGTTTACATTAAAAAGTCC..........................................................................................................................................................................................................................211.000.00------------1.00--
.....................................................................................................................................................................CACAGAATTATACTTTTGG..................................................................191.000.00---1.00-----------
...............................................................................................................ATAAACTCATGAAAATGCTT.......................................................................................................................201.000.00-------1.00-------
...............................................................................................................................................................................TACTTTCTTTTTTTCTAACA.......................................................201.000.00--1.00------------
..............................................................................................................................................................TTTTAAACACAGAATTCTTT........................................................................201.000.00-------------1.00-
..............................................................................................................................................................................ATACTTTCTTTTTTTCCAG.........................................................191.000.00----1.00----------
......................TAAAAATAAGTCAGATGCA.................................................................................................................................................................................................................191.000.00------1.00--------
.............................................................................................................................................................................TATACTTTCTTTTTTTCTG..........................................................1930.330.33--0.33------------
..............................................................................................................................................................................ATACTTTCTTTTTTTCTG..........................................................1880.250.25--0.12-0.12----------

Antisense strand
CAATGCCATCTTCTGTTTACATTAAAAATAAGTCAGAACATCATCCATGAGTTCCACCATCATTTCTTGCAAAACAATTGCCAAATACAATTTCAGCAAAGACACACCAAAATAAACTCATGAAAATTTACTGCCATAAATTTCAAGTACCAAGTATATTTTAAACACAGAATTATACTTTCTTTTTTTCTGATACTCAGAGTTGCAGTTACAGATGAAGTTACATACTTTGTATTATTCCTGGGGAAAC
.....................................................................................................................(((.(((((..((((.............))))..(((((((.(((.......))).))))))).....)))))))).........................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
................................................GAGTTCCACCATCATTG......................................................................................................................................................................................... 176.000.00-----3.00--2.00--1.00---
.......................................................ACCATCATTTCTTGCAATAG............................................................................................................................................................................... 201.000.00----------1.00----
...................................................TTCCACCATCATTTCGACC.................................................................................................................................................................................... 191.000.00-------1.00-------
.................................................AATGATGGTGGAACT.......................................................................................................................................................................................... 1560.170.17--------------0.17