ID: uc001dbw.2_intron_1_0_chr1_65453357_r.5p
GENE: (4)
chr1:65454918-65455167-


(2)
AGO2.ip 		(2)
BRAIN 		(2)
BREAST 		(17)
CELL-LINE 		(1)
HEART 		(2)
HELA 		(2)
LIVER 		(1)
OTHER 		(3)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
CCCACTCCCATGCCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGGTAAGGTGTGGAATAACAGCAAATAAAAATGCCACAAAACTTTCCTACCATTTTTGAGTTTATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGAGATGGAGTCTCTCTTTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAGCCTCTGCCTCCCAGGTTCAAACAATTC
.........................................................................................................((.(((((((((..((..((..((..((..........))..))..))..))..))))))))).))...............................................................................
.....................................................................................................102.....................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189785SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...............................................................................................................................TATTTATTTATTTATTTATTTATTTATTTATCAG.........................................................................................3416.000.008.004.00--4.00-----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATCTAG........................................................................................................3415.000.007.007.00---1.00----------------------------
........................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCAG.................................................................................................3312.000.004.00----4.004.00---------------------------
........................................................................................................................................ATTTATTTATTTATTTATTTATCATG........................................................................................2612.000.006.006.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCAG............................................................................................................3012.000.002.008.00--1.00-1.00---------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTCTTG...........................................................................................................3312.000.007.00---2.003.00----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATCTTG........................................................................................................3512.000.007.004.00---1.00----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTCTTG...........................................................................................................3212.000.003.004.00--2.003.00----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTCTAG..............................................................................................................2811.000.005.006.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCTAG..........................................................................................................3311.000.006.005.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATCTAG............................................................................................................3111.000.007.004.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCTG...........................................................................................................3211.000.006.001.00--1.003.00----------------------------
.................................................................................................................................TTTATTTATTTATTTATTTATTTATTTATCTCG........................................................................................3310.000.0010.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATCCG.........................................................................................................3310.000.002.001.00--7.00-----------------------------
.................................................................................................................................TTTATTTATTTATTTATTTATTTATTTATCCG.........................................................................................3210.000.00----10.00-----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATCTAG............................................................................................................308.000.006.002.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTACG...........................................................................................................318.000.004.003.00----1.00---------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATCTG.........................................................................................................348.000.002.002.00--1.003.00----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATCCG.............................................................................................................297.000.001.001.00--3.002.00----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTCAG............................................................................................................317.000.004.003.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATCTTG............................................................................................................317.000.003.004.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCTG............................................................................................................307.000.004.002.00---1.00----------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATTTAAG...........................................................................................................356.000.002.00---1.003.00----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATTCATG.......................................................................................................356.000.003.003.00--------------------------------
.....................................................................................................................................TTTATTTATTTATTTATTTATTTATCTGC........................................................................................296.000.00--6.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATCTAG........................................................................................................356.000.002.004.00--------------------------------
..................................................................................................................................TTATTTATTTATTTATTTATTTATCATG............................................................................................286.000.006.00---------------------------------
..................................................................................................................................TTATTTATTTATTTATTTATTTATCTCG............................................................................................286.000.006.00---------------------------------
........................................................................................................................ATTTATTTATTTATTTATTTATTTATCTCG....................................................................................................305.000.00-----5.00----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCTTG...........................................................................................................315.000.004.00---1.00-----------------------------
...........................................................................................................................TATTTATTTATTTATTTATTTATTTATCTGC................................................................................................315.000.00--5.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATCG..............................................................................................................295.000.003.002.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTCTG................................................................................................................275.000.002.002.00---1.00----------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTTCTG...........................................................................................................335.000.004.00----1.00----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATTCAG........................................................................................................355.000.003.002.00--------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATCTAG................................................................................................................295.000.004.001.00--------------------------------
............................................................................................................................ATTTATTTATTTATTTATTTATTTATCTGC................................................................................................305.000.00---5.00------------------------------
....................................................................................................................................ATTTATTTATTTATTTATTTATTTATCGGT........................................................................................305.000.00--5.00-------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTCATG...............................................................................................................274.000.001.001.00--1.001.00----------------------------
................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCTG........................................................................................344.000.004.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTACG...............................................................................................................274.000.001.002.00----1.00---------------------------
................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCG.........................................................................................334.000.00----4.00-----------------------------
............................................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCC.............................................................................................334.000.004.00---------------------------------
..............................................................................................................................TTATTTATTTATTTATTTATTTATTTATTTATCAG.........................................................................................354.000.004.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCCG............................................................................................................303.000.003.00---------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTCTAG...............................................................................................................293.000.002.001.00--------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATCTAG............................................................................................................323.000.003.00---------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATCTTG............................................................................................................323.000.002.001.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTCATG...........................................................................................................323.000.003.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATCCAG............................................................................................................313.000.003.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCCG...........................................................................................................323.000.00-3.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTAACAG.........................................................................................................343.000.001.00---2.00-----------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTATTG...............................................................................................................292.000.00----1.001.00----------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTAG.............................................................................................................312.000.00----2.00-----------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGTCCGG.......2702.001.00--2.00-------------------------------
..........................................................................................................AGTTTATTTTATTTATTTATTGGAG.......................................................................................................................252.000.00--2.00-------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTCTG................................................................................................................302.000.001.001.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATCCAG........................................................................................................342.000.001.001.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTCCAG..............................................................................................................282.000.001.001.00--------------------------------
...............................................................................................................................................................................TTTGTCGCCCAGGCTGGAGTGCAGTGCG...............................................282.000.00--1.001.00------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCG.............................................................................................................292.000.001.00----1.00----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTACTG..........................................................................................................332.000.002.00---------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTCTTG..............................................................................................................322.000.002.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTCTTG..........................................................................................................322.000.00-1.00---1.00----------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATTCAG............................................................................................................332.000.001.001.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCAAG...........................................................................................................312.000.001.001.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTACTA..............................................................................................................282.000.002.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTACATG.................................................................................................................262.000.002.00---------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATCTAG............................................................................................................342.000.002.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTCATG...................................................................................................................242.000.001.001.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATCTTG............................................................................................................302.000.001.001.00--------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTCAAG...............................................................................................................292.000.001.001.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCTGG..........................................................................................................332.000.00--2.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTCTAG..............................................................................................................292.000.001.001.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTACTAG.............................................................................................................302.000.001.001.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTCTAG...........................................................................................................322.000.001.001.00--------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTCTGG..............................................................................................................312.000.00--2.00-------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATCTAG............................................................................................................332.000.002.00---------------------------------
...............................................................................................................................................................................................................TCTTGGCTCACTGCAGCCTCTGCCTCCGTG.............302.000.00--2.00-------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTCTCG..................................................................................................................272.000.001.00---1.00-----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTCTG............................................................................................................312.000.001.001.00--------------------------------
.................................................................................................................................................................................................................TTGGCTCACTGCAGCCTCTGCCTGGGT..............272.000.00--2.00-------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATCAAG............................................................................................................302.000.001.00---1.00-----------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTCTCG..............................................................................................................302.000.00-2.00--------------------------------
.................................TTCAGGACCATTGCAAG........................................................................................................................................................................................................1721.501.50-----------1.50----------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATCTTC........................................................................................................351.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTCATG...............................................................................................................281.000.00----1.00-----------------------------
...................TATGGGCTGCTGTCTCCCA....................................................................................................................................................................................................................191.000.00----------------------------1.00-----
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATTCAA........................................................................................................341.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATCCTG................................................................................................................271.000.001.00---------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCCAGG...............221.000.00---1.00------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATTAG.............................................................................................................331.000.00-----1.00----------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGGTCC........261.000.00--1.00-------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTACCCA.............................................................................................................331.000.001.00---------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGCTC..........241.000.00---1.00------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATTCACT.......................................................................................................351.000.001.00---------------------------------
..........................................................................................................................................................................................................................TGCAGCCTCTGCCTCCCAGCG...........211.000.00---1.00------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTCTTG..............................................................................................................301.000.00--1.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATCGG.............................................................................................................301.000.00--1.00-------------------------------
...................................................................................................................................................................................TCGCCCAGGCTGGAGTGCAGTGGCATCACG.........................................301.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCTA............................................................................................................301.000.00------1.00---------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTCGG...........................................................................................................311.000.00--1.00-------------------------------
..............................................................................................................................................................................CTTTGTCGCCCAGGCTGGAGTGCTCTG.................................................271.000.00-------------------------------1.00--
.............................................................................................................................................................................TCTTTGTCGCCCAGGCTGGAGTGCAGGGG................................................291.000.00--1.00-------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGTGCAGTCC................................................261.000.00--1.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTACG...................................................................................................................241.000.00----1.00-----------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTAAT................................................................................................................281.000.001.00---------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTACAG..................................................................................................................271.000.00----1.00-----------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATTTCATG..........................................................................................................351.000.00-1.00--------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGGAC.........281.000.00--1.00-------------------------------
........................................................................................................TGAGTTTATTTTATTTATTTATTTATTTAC....................................................................................................................301.000.00--1.00-------------------------------
.....................................................................................................................................................TTTATTTATTTGAGATGGCGC................................................................................211.000.00--1.00-------------------------------
.............................................................................................................................................................................................TGGAGTGCAGTGGCATGATCTTGGA....................................251.000.00---------1.00------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTCTAG...............................................................................................................281.000.001.00---------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATCGGG................................................................................................................301.000.00------1.00---------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCTGA..........................................................................................................331.000.00--1.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTCAAA...................................................................................................................241.000.00-----1.00----------------------------
..............................................................................................................TATTTTATTTATTTATTTCCG.......................................................................................................................211.000.00-1.00--------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATTCAAG...........................................................................................................341.000.00-1.00--------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGTGCAGTGCGCA.............................................291.000.00---1.00------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTCTAT..............................................................................................................281.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATATTG........................................................................................................351.000.001.00---------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATTCG.............................................................................................................331.000.001.00---------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGGCC.........281.000.00--1.00-------------------------------
.........................................................................................................................................................................................AGGCTGGAGTGCAGTGGCATGCGGC........................................251.000.00--1.00-------------------------------
............................................................................................................................................................................................................TGATCTTGGCTCACTGCAGCCTCTGCCCCCC...............311.000.00---1.00------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTACCTG.................................................................................................................261.000.001.00---------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATATTG............................................................................................................341.000.00----1.00-----------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATTATTG...........................................................................................................341.000.00-----1.00----------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTCAAT..................................................................................................................261.000.00----1.00-----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTCTCG...........................................................................................................321.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATATAG............................................................................................................301.000.00-1.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATTCTAG.......................................................................................................351.000.00-1.00--------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATCG..............................................................................................................321.000.00-1.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTCATG..........................................................................................................321.000.001.00---------------------------------
........................................................................................................................................................................................................GGCATGATCTTGGCTCACTGGGT...........................231.000.00--------------------------------1.00-
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATC...............................................................................................................311.000.00--1.00-------------------------------
......................................................................................................................................................................................................GTGGCATGATCTTGGCTCACTGCAGCCT........................2801.001.00--------1.00-------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATTCTTG...........................................................................................................351.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCCAG..........................................................................................................331.000.00-1.00--------------------------------
....................................................................................................................................ATTTATTTATTTATTTATTTATTTATTTGAATAG....................................................................................341.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTACCTG.............................................................................................................291.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCAT...........................................................................................................321.000.001.00---------------------------------
...............................................................................................................................................................................................................TCTTGGCTCACTGCAGCCTCTGAAA..................251.000.00-----------------------------1.00----
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATCA..........................................................................................................331.000.001.00---------------------------------
....................................................................................................................................................................................................................GCTCACTGCAGCCTCTGCCCTGG...............231.000.00---1.00------------------------------
..........................................................................................................AGTTTATTTTATTTATTTGGTT..........................................................................................................................221.000.00---1.00------------------------------
..................................................................................................................................................................................................................TGGCTCACTGCAGCCTCTGCCTCCCCGGG...........291.000.00---1.00------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTATTG...........................................................................................................331.000.00-----1.00----------------------------
..............................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCATCC...............291.000.00--1.00-------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATCTAA........................................................................................................341.000.00-1.00--------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCGGGG.............211.000.00---1.00------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATCTTG........................................................................................................341.000.00-1.00--------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTCTG............................................................................................................321.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATCAAG................................................................................................................271.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCTAG...........................................................................................................311.000.00-1.00--------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATCTAA................................................................................................................291.000.00-1.00--------------------------------
....................................................................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCGGGT.............251.000.00---1.00------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTCTGG..............................................................................................................291.000.00---1.00------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTCTAG...................................................................................................................271.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCCT............................................................................................................301.000.00-1.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTAATG..............................................................................................................291.000.00-1.00--------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCTTTT...........251.000.00------------------1.00---------------
.........................................................................................................................................................................TCTCTCTTTGTCGCCCAGGCTGGTCTC......................................................271.000.00--1.00-------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTTCTT...........................................................................................................331.000.00-1.00--------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATCTCG................................................................................................................281.000.001.00---------------------------------
.................................................................................................................................................................................................................TTGGCTCACTGCAGCCTCTGCCTAGGG..............271.000.00--1.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTAAAAG.............................................................................................................301.000.00------1.00---------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATTCG.............................................................................................................321.000.00-1.00--------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTATCTT.............................................................................................................331.000.00-1.00--------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGT...........2301.001.00---------1.00------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTCCG................................................................................................................261.000.00-1.00--------------------------------
.................................................................................................................................................................................................GTGCAGTGGCATGATCTTGGCTCAAAAA.............................281.000.00------------1.00---------------------
...............................................................................................................................................................................TTTGTCGCCCAGGCTGGAGTGCAGTCGC...............................................281.000.00---1.00------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTACCTT.................................................................................................................261.000.00---1.00------------------------------
..............................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCTTGGG..............301.000.00--1.00-------------------------------
.........................................................................................................................................................................................AGGCTGGAGTGCAGTGGCATGCCCC........................................251.000.00--1.00-------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCCAG...........................................................................................................311.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTAACAG.............................................................................................................301.000.00-1.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATACTG............................................................................................................301.000.00-----1.00----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATTCG.........................................................................................................331.000.00-1.00--------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGTGCAGTGGGGTT............................................301.000.00---1.00------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTATTG...............................................................................................................281.000.00----1.00-----------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTCTAG..............................................................................................................301.000.00-1.00--------------------------------
.................................................GGTAAGGTGTGGAATAACA......................................................................................................................................................................................1911.001.00---------------------------------1.00
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTAACG..........................................................................................................331.000.00-----1.00----------------------------
..................................................................................................................................................................................................................TGGCTCACTGCAGCCTCTGCCTCAGGC.............271.000.00--1.00-------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATCC..................................................................................................................261.000.00--1.00-------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCTGCCCGT................201.000.00---------------------1.00------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTACG...............................................................................................................281.000.00-----1.00----------------------------
.......................................................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCAGGTTCAAACGC...321.000.00-----------------1.00----------------
............................................................................................................TTTATTTTATTTATTTATTTATTTATTTAATTG.............................................................................................................331.000.001.00---------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCTA...........................................................................................................321.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTCACG...............................................................................................................271.000.001.00---------------------------------
............................................................................................................TTTATTTTATTTATTTATTTATTTACAG..................................................................................................................281.000.00-1.00--------------------------------
..............................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCTCCGGCG............321.000.00---1.00------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGTGCAGTCTC...............................................271.000.00---1.00------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTCGCG..................................................................................................................261.000.00--1.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTAAC...............................................................................................................281.000.00---1.00------------------------------
....................................................................................................................................................................................................CAGTGGCATGATCTTGGCTGAAA...............................231.000.00-------------1.00--------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTCAAC..........................................................................................................321.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTACCAG.........................................................................................................331.000.00----1.00-----------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTCAT...............................................................................................................301.000.001.00---------------------------------
.............................................................................................................TTATTTTATTTATTTATTCTAG.......................................................................................................................221.000.00-1.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATGTAG............................................................................................................311.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATCG..............................................................................................................281.000.00-1.00--------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTCCTG...........................................................................................................321.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTACCAG.............................................................................................................291.000.00-----1.00----------------------------
..........................................................................................................AGTTTATTTTATTTATTTATTTATTTATTTACT...............................................................................................................331.000.00--1.00-------------------------------
.....................................................................................................TTTTGAGTTTATTTTATTTTTTG..............................................................................................................................231.000.001.00---------------------------------
..............................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCTCGGG..............301.000.00---1.00------------------------------
.........................................................................................................................................................................................................GCATGATCTTGGCTCACTC..............................191.000.00------------------------------1.00---
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATTTACTG..........................................................................................................351.000.001.00---------------------------------
....................................................................................................TTTTTGAGTTTATTTTATTTATTTACTTA.........................................................................................................................291.000.00---1.00------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATCTG.........................................................................................................331.000.001.00---------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTCC.............................................................................................................291.000.00--1.00-------------------------------
............................................................................................................................................................................................................TGATCTTGGCTCACTGCAGCCCCGG.....................251.000.00---1.00------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTATACAG........................................................................................................351.000.00-1.00--------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATCAAG................................................................................................................281.000.001.00---------------------------------
....................................................................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCAAA..............241.000.00----------------1.00-----------------
...............................................................................................................ATTTTATTTATTTATTTATTTACTTC.................................................................................................................261.000.00---1.00------------------------------
...........................................................................................................GTTTATTTTATTTATTTATTTCGCT......................................................................................................................251.000.00--1.00-------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGTGCAGTGCGCG.............................................291.000.00---1.00------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTAGTTG.............................................................................................................321.000.00-----1.00----------------------------
..............................................................................................................TATTTTATTTATTTATTTATATAG....................................................................................................................241.000.001.00---------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTCGAA...........................................................................................................331.000.00-----1.00----------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATACG.............................................................................................................291.000.00-1.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATCTCG............................................................................................................301.000.00-1.00--------------------------------
.....................................................................................................................................................................................................AGTGGCATGATCTTGGCGCAG................................211.000.00---1.00------------------------------
.........................................................................................................................................TTTATTTATTTATTTATTTATTTGAGATCTTG.................................................................................321.000.00-----1.00----------------------------
.............................................................................................................................................................................TCTTTGTCGCCCAGGCTGGAGTTC.....................................................241.000.00---1.00------------------------------
..............................................................................................................TATTTTATTTATTTATTTATTTATTTATTTCCAG..........................................................................................................341.000.00-----1.00----------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATTTATTTCTAA..........................................................................................................331.000.00-1.00--------------------------------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTATTTACG.......................................................................................................351.000.001.00---------------------------------
.............................................................................................................TTATTTTATTTATTTATTTATTTATTTATCTA.............................................................................................................321.000.00--1.00-------------------------------
...............................................................................................................ATTTTATTTATTTATTTATTTATCTG.................................................................................................................261.000.00-1.00--------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGTGCAGTGCGC..............................................281.000.00--1.00-------------------------------
..................................................................................................................................................................................................TGCAGTGGCATGATCTTGGAAAA.................................231.000.00----------------------1.00-----------
................................................................................................................TTTTATTTATTTATTTATTTATTTATTTCAAG..........................................................................................................321.000.001.00---------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGTGCAGTGCAC..............................................281.000.00---1.00------------------------------
...................................................................................................................................................................................TCGCCCAGGCTGGAGTGCAGTGGCATGTGCG........................................311.000.00--1.00-------------------------------
..................................................................................................................................................................................................TGCAGTGGCATGATCTTGGAT...................................211.000.00-------------------------1.00--------
................................................................................................................TTTTATTTATTTATTTATTTATTTATAAG.............................................................................................................291.000.00-----1.00----------------------------

Antisense strand
CCCACTCCCATGCCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGGTAAGGTGTGGAATAACAGCAAATAAAAATGCCACAAAACTTTCCTACCATTTTTGAGTTTATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGAGATGGAGTCTCTCTTTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAGCCTCTGCCTCCCAGGTTCAAACAATTC
.........................................................................................................((.(((((((((..((..((..((..((..........))..))..))..))..))))))))).))...............................................................................
.....................................................................................................102.....................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189785SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553576(SRX182782)
source: Testis. (testes)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...........................................................................................................................................TATTTATTTATTTATTTATTTGAGATCCG.................................................................................. 292.000.00----------2.00-----------------------
.........................................................................................................................................................................................................................CTGCAGCCTCTGCCTCCCAGAA........... 221.000.00--------------------1.00-------------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTGGC........ 231.000.00--1.00-------------------------------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTCAGCGG.... 271.000.00--1.00-------------------------------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGAG.......... 211.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAAGCG.... 261.000.00---1.00------------------------------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTCAACAAG... 281.000.00---1.00------------------------------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTGGCG...... 251.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTGGC....... 231.000.00---1.00------------------------------
........................................................................................................................................................................................................................................CCCAGGTTCAAACAATTCTT 201.000.00---------------1.00------------------
...............................................................................................................................................................................................................................CCTCTGCCTCCCAGGTTCAAAACGC.. 251.000.00---1.00------------------------------
.........................................................................................................................................................................................................................CTGCAGCCTCTGCCTCCCAGGTTCACGC..... 281.000.00--1.00-------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTTTCC...... 241.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGCGG....... 231.000.00---1.00------------------------------
.......................................................................................................................................................................................................TGGCATGATCTTGGCTCACTGCAGCCTCTTGC................... 321.000.00--------1.00-------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGTTCAAGCC.... 301.000.00--1.00-------------------------------
................CAGTATGGGCTGCTGGTTC....................................................................................................................................................................................................................... 191.000.00---------------------------1.00------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTGAGC...... 241.000.00---1.00------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGTGTC........ 291.000.00---1.00------------------------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGTTGTC....... 301.000.00---1.00------------------------------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTGAG........ 231.000.00---1.00------------------------------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTGAGT...... 251.000.00---1.00------------------------------
......................................................................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCAGGTTCACTG..... 311.000.00--1.00-------------------------------
.........................................................................................................................................................................................................................CTGCAGCCTCTGCCTCCCAGGTTCAAAGG.... 291.000.00---1.00------------------------------
.......................................................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCAGGTTCCGCT..... 301.000.00--1.00-------------------------------
....................................................................................................................................................................................................................................TTTGAACCTGGGAGGC...... 1601.001.00-------1.00--------------------------
.................................................................................................................................................TTTATTTATTTATTTGAGATGGAGTCAAG............................................................................ 291.000.00-1.00--------------------------------
.....................................................................................................................................................................................................................................TGTTTGAACCTGGGAGG.... 1701.001.00-------1.00--------------------------
..........................................................................................................................................................................................................................TGCAGCCTCTGCCTCCCAGGTTCAAAAG.... 281.000.00--1.00-------------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGTAGCC....... 2701.000.00--1.00-------------------------------
.................................................................................................................................................................................................................TTGGCTCACTGCAGCCTCTGACC.................. 231.000.00---1.00------------------------------
................................................................................................................................................................................TTGTCGCCCAGGCTGGAGCAG..................................................... 211.000.00--------------------------1.00-------
...........................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTCAGGCG.... 271.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAGAGC.... 261.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAGAGG.... 261.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGC......... 211.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAAGAA.... 261.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAGC...... 241.000.00---1.00------------------------------
...................................................................................................................................................................ATGGAGTCTCTCTTTGTCGCCA................................................................. 221.000.00------------------------1.00---------
.........................................................................................................................................................................................................................GAACCTGGGAGGCAGAGGCTGCAG......... 2401.001.00-------1.00--------------------------
...............................................................................................................................................................................................................................CCTCTGCCTCCCAGGTTCAAACAGCGC 271.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTGAGG...... 241.000.00---1.00------------------------------
.....................................................................................................................................................................................................................................ATTGTTTGAACCTGGGAGG.. 1901.001.00-------1.00--------------------------
....................................................................................................................................................................................................................................TGTTTGAACCTGGGAGGC.... 1801.001.00--------1.00-------------------------
........................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCGC............... 191.000.00--------------1.00-------------------
.......................................................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCAGGTTGGGC...... 291.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAAGC..... 251.000.00---1.00------------------------------
.....................................................................................................................................................................................................................GAACCTGGGAGGCAGAGGCTGCAGTGAG......... 2801.001.00-------------------1.00--------------
.....................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGG........... 261.000.00---1.00------------------------------
.........................................................................................................................................................................................................................CTGCAGCCTCTGCCTCCCAGGTTGGCG...... 271.000.00--1.00-------------------------------
..............................................................................................................................................................................................................................GCCTCTGCCTCCCAGGTTCACACC.... 241.000.00--1.00-------------------------------
....................................................................................................................................................................................................................................GTTTGAACCTGGGAGGC..... 1701.001.00-------1.00--------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGAGG....... 231.000.00---1.00------------------------------
................................................................................................................................................................................................AGTGCAGTGGCATGATCTTGGCTT.................................. 241.000.00-----------------------1.00----------
.......................................................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCAGGTTCACC...... 291.000.00---1.00------------------------------
............................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGCTC....... 231.000.00---1.00------------------------------
......................................................................TTGTGGCATTTTTATTT................................................................................................................................................................... 1790.110.11---0.11------------------------------