ID: uc001dbl.2_intron_2_0_chr1_64576641_r.3p
GENE: (2)
chr1:64576591-64576840-


(1)
AGO2.ip
(2)
BREAST
(9)
CELL-LINE
(3)
CERVIX
(1)
HEART
(1)
LIVER
(1)
OTHER
(4)
SKIN
(1)
TESTES

Sense strand
ATGCTCTTCTAGGAGAAGTTTTAGTAAAAACATAAGAATGCTGCTGGTAAGGAAATCTCTAGGTGATGCCAGGGACTGACAACAGAGGATTTCTGATAGAAGAAAGAGACAAGGATTTGGACCAAGTTTCTGAATGGAATCATTGTACTTTCTTTTTTTTTTTCTTCCTTCTCCCTCCCCGCTTCACCCCCGACCTCTAGAGTTTCTTAGCAGGCATTTTGGAGGAAAAGATTTGGATCAGAAATTCAGA
..................................................................................(((((...)))))...(((((((((((.(((((...((..(((..((((....))))...)))..)).))))).)))))))))))...................................................................................
......................................................................71..................................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577589(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
GSM532877(GSM532877)
G691N. (cervix)
..................................................................................................................................................ACTTTCTTTTTTTTTTTCAAG...................................................................................214.000.00--1.001.001.00-1.00---------------
...........................................................................CTGACAACAGAGGATTAC.............................................................................................................................................................183.000.00-------2.00----1.00---------
............................................................................TGACAACAGAGGATTAC.............................................................................................................................................................173.000.00-------3.00--------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTAAG....................................................................................213.000.00--1.001.00--1.00---------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTCTTAATG................................................................................252.000.00--1.001.00------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCAGG................................................................................2412.001.002.00---------------------
...................................................................................................................................................CTTTCTTTTTTTTTTTCTTCCAG................................................................................232.000.00--2.00-------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTTAG................................................................................242.000.001.00---1.00-----------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTCTTAG..................................................................................232.000.00---2.00------------------
........................................................................................................................................................TTTTTTTTTTTCTTCCTTCAAAT...........................................................................232.000.00-----1.001.00---------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTC.................................................................................2312.001.001.001.00--------------------
........................................................................................................................................................TTTTTTTTTTTCTTCCGGCC..............................................................................201.000.00-1.00--------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCGAG................................................................................2411.001.001.00---------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCT..................................................................................2211.001.00----1.00-----------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCCTTTCCT............................................................................241.000.00-1.00--------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCCTGGG..............................................................................221.000.00-1.00--------------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTGGCC...................................................................................221.000.00----1.00-----------------
....................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTTCCTAG...........................................................................271.000.00---1.00------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCCTTTAC.............................................................................231.000.00-----1.00----------------
.....................................................................................................................................................TTCTTTTTTTTTTTCTTCGGC................................................................................211.000.00----1.00-----------------
.......................................................................................................................................................................................................GAGTTTCTTAGCAGGGCT.................................181.000.00--------1.00-------------
...............................................................................................................................................................................TCCCCGCTTCACCCCGCGC........................................................191.000.00----------------1.00-----
..........................................................................................................................................................TTTTTTTTTCTTCCTTCTCCCTTG........................................................................241.000.001.00---------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTTGC................................................................................241.000.00-1.00--------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCAGTG...............................................................................211.000.00-1.00--------------------
.......................................................................................................................................................................................................GAGTTTCTTAGCAGGGCTT................................191.000.00--------1.00-------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCCTTG..................................................................................221.000.00---1.00------------------
...........................................................................CTGACAACAGAGGATTACGA...........................................................................................................................................................201.000.00---------1.00------------
...................................................................................................................................................CTTTCTTTTTTTTTTTCTTATA.................................................................................221.000.001.00---------------------
........................................................................................................................................................TTTTTTTTTTTCTTCCTTCTTGCG..........................................................................241.000.00-1.00--------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCCATG...............................................................................211.000.00-1.00--------------------
....................................................................................................................................................TTTCTTTTTTTTTTTCTTCCACC...............................................................................231.000.00-1.00--------------------
.....................................................................................................................................................TTCTTTTTTTTTTTCTTCCTTTAAG............................................................................251.000.001.00---------------------
...................................................................................................................................................CTTTCTTTTTTTTTTTCTTCCTCAG..............................................................................251.000.001.00---------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCCAG...................................................................................211.000.00--1.00-------------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTCCTG...................................................................................221.000.00-----1.00----------------
...................................................................................................................................................CTTTCTTTTTTTTTTTCTTATAG................................................................................231.000.00-----1.00----------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCGGC................................................................................201.000.001.00---------------------
...................................................................................................................................................CTTTCTTTTTTTTTTTCTTCCAAG...............................................................................241.000.00---1.00------------------
...................................................................................................................................................CTTTCTTTTTTTTTTTCTTAAG.................................................................................221.000.00--1.00-------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCCTTCTTAT...........................................................................251.000.001.00---------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTAGG................................................................................241.000.00-1.00--------------------
.......................................................................................................................................................CTTTTTTTTTTTCTTCCTCG...............................................................................201.000.00---1.00------------------
....................................................................................................................................................TTTCTTTTTTTTTTTCTTCCACG...............................................................................231.000.00--1.00-------------------
.......................................................................................................................................................................................................GAGTTTCTTAGCAGGGCTG................................191.000.00--------1.00-------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTAACG...................................................................................221.000.00--1.00-------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCCTTTAG.............................................................................231.000.00----1.00-----------------
...............................................................................................................................................TGTACTTTCTTTTTTTTTTTCCGAG..................................................................................251.000.00-1.00--------------------
................................................................................................................................................GTACTTTCTTTTTTTTTTTAG.....................................................................................211.000.00-----1.00----------------
............................................................................................................................................................................................................................GGAGGAAAAGATTTGGGGAT..........201.000.00-----------------1.00----
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTTG................................................................................2411.001.001.00---------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCCG....................................................................................201.000.001.00---------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTAAG.................................................................................231.000.00---1.00------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTATG..................................................................................221.000.00--1.00-------------------
...................................................................................................................................................CTTTCTTTTTTTTTTTCTTCAAG................................................................................231.000.00--1.00-------------------
.......................................................................................................AAGAGACAAGGATTTGAAC................................................................................................................................191.000.00------------------1.00---
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTCC................................................................................2411.001.00-1.00--------------------
.....................................................................................................................................................TTCTTTTTTTTTTTCTTCCTTTGG.............................................................................241.000.001.00---------------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTCTGCCC.................................................................................241.000.00-1.00--------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTTGG................................................................................241.000.00-1.00--------------------
........................................................................................................................................................TTTTTTTTTTTCTTCCTTCCATC...........................................................................231.000.00-1.00--------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTACC................................................................................241.000.001.00---------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCACG................................................................................201.000.00------1.00---------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTC...................................................................................2111.001.001.00---------------------
.......................................................................................................................................................CTTTTTTTTTTTCTTCCTTAAG.............................................................................221.000.00--1.00-------------------
.............................................................................................................................................................................................................................GAGGAAAAGATTTGGCGAC..........191.000.00-------------1.00--------
....................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTCG...............................................................................231.000.00-1.00--------------------
..........................................................................................................................................................TTTTTTTTTCTTCCTTCCAAG...........................................................................211.000.00--1.00-------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCATAG..................................................................................221.000.001.00---------------------
.........................................................................................................................................................TTTTTTTTTTCTTCCTTCAATG...........................................................................221.000.00--1.00-------------------
.....................................................................................................................................................TTCTTTTTTTTTTTCTTCCAGAG..............................................................................231.000.001.00---------------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTCCTGG..................................................................................231.000.00------1.00---------------
....................................................................................................................................................TTTCTTTTTTTTTTTCTTCCAGG...............................................................................231.000.00-1.00--------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCCGG...................................................................................211.000.001.00---------------------
..............................................................................................................................................................TTTTTCTTCCTTCTCCCTCTG.......................................................................211.000.00-----------1.00----------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCCAG................................................................................241.000.001.00---------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCCTTTTCC............................................................................281.000.001.00---------------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTCCG....................................................................................211.000.00---1.00------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTTT................................................................................2411.001.00----1.00-----------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTACT.................................................................................231.000.00----1.00-----------------
.................................................................................................................................................TACTTTCTTTTTTTTTATAG.....................................................................................201.000.00-----1.00----------------
.................................................................................................................................................TACTTTCTTTTTTTTTTTCTTTTAG................................................................................251.000.001.00---------------------
.....................................................................................................................................................TTCTTTTTTTTTTTCTTCCTTTAG.............................................................................241.000.001.00---------------------
.............................................................................................................................................ATTGTACTTTCTTTTTTTTTGAG......................................................................................231.000.00-1.00--------------------
.................................................................................................................................................................................CCCGCTTCACCCCCGCG........................................................171.000.00---------------1.00------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTCTAAG...............................................................................2511.001.00--1.00-------------------
......................................................................................................................................................TCTTTTTTTTTTTCTTCCTCTAG.............................................................................231.000.00---1.00------------------
..................................................................................................................................................ACTTTCTTTTTTTTTTTCTTTGC.................................................................................231.000.001.00---------------------
..........AGGAGAAGTTTTAGT.................................................................................................................................................................................................................................1560.330.33-0.33--------------------
....................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTTGG..............................................................................2490.220.110.22---------------------
....................................................................................................................................................TTTCTTTTTTTTTTTCTTCCTT................................................................................2290.110.110.11---------------------

Antisense strand
ATGCTCTTCTAGGAGAAGTTTTAGTAAAAACATAAGAATGCTGCTGGTAAGGAAATCTCTAGGTGATGCCAGGGACTGACAACAGAGGATTTCTGATAGAAGAAAGAGACAAGGATTTGGACCAAGTTTCTGAATGGAATCATTGTACTTTCTTTTTTTTTTTCTTCCTTCTCCCTCCCCGCTTCACCCCCGACCTCTAGAGTTTCTTAGCAGGCATTTTGGAGGAAAAGATTTGGATCAGAAATTCAGA
..................................................................................(((((...)))))...(((((((((((.(((((...((..(((..((((....))))...)))..)).))))).)))))))))))...................................................................................
......................................................................71..................................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577589(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
GSM532877(GSM532877)
G691N. (cervix)
.........................................................................................................................................................................................ACTCTAGAGGTCGGGGGT............................................... 1811.001.00---1.00------------------
.................................................................................................................................................................................................CCTCTAGAGTTTCTTGATC...................................... 191.000.00-1.00--------------------
..................................................................................................................................................................TCTTCCTTCTCCCTCCCCGG.................................................................... 201.000.00----------1.00-----------
.....................................................................................................................................................................TCCTTCTCCCTCCCCGCCT.................................................................. 191.000.00-1.00--------------------
.................................................................................................AGAAGAAAGAGACAAGCTTT..................................................................................................................................... 201.000.00--------------1.00-------
.........................................................................................CTTGTCTCTTTCTTCTATCAGAAA......................................................................................................................................... 2411.001.00-------------------1.00--
........................................................................................................................................................GAGAAGGAAGAAAAAAAAAAA............................................................................. 2120.500.50--------------------0.50-
........................................................................................................................................................................GAAGCGGGGAGGGAGAA................................................................. 1760.170.17---------------------0.17