ID: uc001dap.2_intron_47_0_chr1_63128802_r.5p
GENE: (1)
chr1:63153698-63153947-


(1)
AGO1.ip OTHER.mut
(6)
AGO2.ip
(5)
B-CELL
(3)
BRAIN
(19)
BREAST
(26)
CELL-LINE
(5)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(2)
HELA
(8)
LIVER
(4)
OTHER
(26)
SKIN
(1)
XRN.ip

Sense strand
GCCGCAGCAGCCATGGCCGAGCGCCGCGCCTTCGCCCAGAAGATCAGCAGGTAAATATCCGGCGTGGGGCGCGCCGCCGCCGCCGCCCGAGAAAGAGCCGCGGAGTCCTCCCAGGCCTGGCCTAGGAGGCGGGTGGGTGTGGCGGGGCCGGCACCGGGATCCCGCGGCCTGGCTCGCGGCGGGGCGGAAGGGGTTCGGGGTGGCTGAGGGGGTAGCGGAGGCCTCGCGCCGCCCTCGAACCCCGGCCTTC
.........................................................................................................................................................((.(((((((...((((.((.....)).))))....))))))).))...................................................
......................................................................................................................................................151..............................................200................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM532880(GSM532880)
G659T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191538(GSM715648)
49genomic small RNA (size selected RNA from t. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343337TAX577743(Rovira)
total RNA. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR343336TAX577740(Rovira)
total RNA. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
...........................................................................................................................................................GGGATCCCGCGGCCTCT..............................................................................1731.000.0028.00-----3.00---------------------------------------------------------------------------------------------
......GCAGCCATGGCCGAGTGG..................................................................................................................................................................................................................................18610.672.00------------------0.831.171.17--------1.67-0.330.500.331.33----0.17----------------------------------0.50-0.33-0.170.33---0.33--0.170.17-0.17-0.17-0.170.170.170.170.17--
.........................................GATCAGCAGGTAAATATTG..............................................................................................................................................................................................199.000.00--8.00------1.00------------------------------------------------------------------------------------------
.................................................................................................................................CGGGTGGGTGTGGCGGG........................................................................................................1715.005.00-2.00---------------2.00---------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................TCGCGCCGCCCTCGAACCCCGGC....2315.005.00-----1.00----4.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TCGCGCCGCCCTCGAACCCCGGCA...2414.005.00-------4.00--------------------------------------------------------------------------------------------
......GCAGCCATGGCCGAGCGG..................................................................................................................................................................................................................................183.000.00--------------------1.00-----------1.00-------------------1.00-----------------------------------------------
..........................................................................................................................................................CGGGATCCCGCGGCC.................................................................................1522.502.50---2.50------------------------------------------------------------------------------------------------
...........................................................................................................................................................GGGATCCCGCGGCCTCTC.............................................................................182.000.001.00-----1.00---------------------------------------------------------------------------------------------
.........................................GATCAGCAGGTAAATACTG..............................................................................................................................................................................................192.000.00---------2.00------------------------------------------------------------------------------------------
..................................................GTAAATATCCGGCGTGGA......................................................................................................................................................................................182.000.00----------------------------2.00-----------------------------------------------------------------------
...........................................................................................................................................................GGGATCCCGCGGCCTCTCC............................................................................192.000.001.00-----1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................GGGATCCCGCGGCCTAT..............................................................................172.000.002.00---------------------------------------------------------------------------------------------------
....................................................AAATATCCGGCGTGGGGC....................................................................................................................................................................................1812.002.00-2.00--------------------------------------------------------------------------------------------------
.........................................GATCAGCAGGTAAATAGTG..............................................................................................................................................................................................192.000.00--2.00-------------------------------------------------------------------------------------------------
......GCAGCCATGGCCGAG.....................................................................................................................................................................................................................................1562.002.00-----0.50----------------0.170.17------0.33-------0.17------------------------------------------0.17--0.17---0.17---------0.17-
............ATGGCCGAGCGCCGCGCCTTCGCCCAG...................................................................................................................................................................................................................2712.002.00---------------------2.00------------------------------------------------------------------------------
....................................................................................................................................................................................GGGGCGGAAGGGGTTCG.....................................................1712.002.00------------2.00---------------------------------------------------------------------------------------
.........................................GATCAGCAGGTAAATATGG..............................................................................................................................................................................................192.000.00--1.00------1.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TCGCGCCGCCCTCGAACCCCGGCT...2412.005.00-----2.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GGGCGGAAGGGGTTCGTT...................................................182.000.00--------------------------2.00-------------------------------------------------------------------------
................................................................................................................................................................................................GTTCGGGGTGGCTGAGGGG.......................................1912.002.00----------------2.00-----------------------------------------------------------------------------------
......GCAGCCATGGCCGAGT....................................................................................................................................................................................................................................1661.832.00-------------------------------------------------------------------------0.50-0.50-----0.170.33-0.17-----0.17---------
......GCAGCCATGGCCGAGTGGA.................................................................................................................................................................................................................................1961.172.00-------------------0.500.33----------0.17-------------------------------------------------------------------0.17
.........................................GATCAGCAGGTAAATAATG..............................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CTGAGGGGGTAGCGGAGGCC...........................2011.001.00----------------------1.00-----------------------------------------------------------------------------
............................................................................................................................GGAGGCGGGTGGGTGTGGTGTT........................................................................................................221.000.00---------------------------------------1.00------------------------------------------------------------
.......CAGCCATGGCCGAGCGCC.................................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------1.00-------------------------------
.........................................GATCAGCAGGTAAATACGG..............................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................................CGGCGGGGCGGAAGGGGT........................................................1811.001.00----------------------------------------------------------1.00-----------------------------------------
......GCAGCCATGGCCGAGCGGA.................................................................................................................................................................................................................................191.000.00-------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................GGGATCCCGCGGCCTAGT.............................................................................181.000.001.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TCGCGCCGCCCTCGAACCCCGGT....231.000.00-----------------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................GGGATCCCGCGGCCTCCC.............................................................................181.000.001.00---------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CGGGGCGGAAGGGGTGGG.....................................................181.000.00------------------------------------------1.00---------------------------------------------------------
...............................................................................................................................................................................GCGGCGGGGCGGAAGA...........................................................161.000.00-----------------------------------------1.00----------------------------------------------------------
..................................................................................................................................................................................GCGGGGCGGAAGGGGTA.......................................................171.000.00--------------1.00-------------------------------------------------------------------------------------
..................................................................................................................GCCTGGCCTAGGAGGCAGG.....................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------
............................................................................................................................................................................................AGGGGTTCGGGGTGGCTGAGG.........................................2111.001.00--------------------------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................GGGGCGGAAGGGGTTCGC....................................................1811.002.00------------1.00---------------------------------------------------------------------------------------
.......CAGCCATGGCCGAGCCTGT................................................................................................................................................................................................................................191.000.00----1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AGGGGGTAGCGGAGGAT...........................171.000.00-------------------------------1.00--------------------------------------------------------------------
.........................................GATCAGCAGGTAAATATTC..............................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------
.........................................GATCAGCAGGTAAATATAT..............................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AAGGGGTTCGGGGTGGAT.............................................181.000.00------------------------------------------------1.00---------------------------------------------------
..............................................................................................................CCAGGCCTGGCCTAGGAGGCGGGTGGGTGTGGC...........................................................................................................3311.001.00-------------------------------------------------1.00--------------------------------------------------
..........................................................................................................................................................................GGCTCGCGGCGGGGCCTT..............................................................181.000.00-------------------------1.00--------------------------------------------------------------------------
..............................................................................................................................................................................CGCGGCGGGGCGGAAGGGGTTGA.....................................................231.000.00----------------------------------------------------------------------1.00-----------------------------
........................................................................................................................................................................................................TGGCTGAGGGGGTAGGCCT...............................191.000.00-------------------------------------------------------1.00--------------------------------------------
...............................................................................................................................................................................................................................TCGCGCCGCCCTCGAACCCCGGTTT..251.000.00-----------------------------------------------------------1.00----------------------------------------
......GCAGCCATGGCCGAGTGGT.................................................................................................................................................................................................................................1960.832.00-----------------------------0.17----------------------------------------------0.170.170.17-------------0.17-------
.....................................................................................................................................................................GGCCTGGCTCGCGGC......................................................................1540.500.50-----------------------------------0.250.25---------------------------------------------------------------
..........................................................................................................................................................CGGGATCCCGCGGCCGTG..............................................................................1820.502.50---0.50------------------------------------------------------------------------------------------------
..............GGCCGAGCGCCGCGC.............................................................................................................................................................................................................................1560.170.17-------------------------------------------------------------------------------------0.17--------------
......GCAGCCATGGCCGAGTGGG.................................................................................................................................................................................................................................1960.172.00--------------------0.17-------------------------------------------------------------------------------
......GCAGCCATGGCCGAGTGC..................................................................................................................................................................................................................................1860.172.00-------------------0.17--------------------------------------------------------------------------------

Antisense strand
GCCGCAGCAGCCATGGCCGAGCGCCGCGCCTTCGCCCAGAAGATCAGCAGGTAAATATCCGGCGTGGGGCGCGCCGCCGCCGCCGCCCGAGAAAGAGCCGCGGAGTCCTCCCAGGCCTGGCCTAGGAGGCGGGTGGGTGTGGCGGGGCCGGCACCGGGATCCCGCGGCCTGGCTCGCGGCGGGGCGGAAGGGGTTCGGGGTGGCTGAGGGGGTAGCGGAGGCCTCGCGCCGCCCTCGAACCCCGGCCTTC
.........................................................................................................................................................((.(((((((...((((.((.....)).))))....))))))).))...................................................
......................................................................................................................................................151..............................................200................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM532880(GSM532880)
G659T. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191538(GSM715648)
49genomic small RNA (size selected RNA from t. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343337TAX577743(Rovira)
total RNA. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR343336TAX577740(Rovira)
total RNA. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
..............................................................................TCTTTCTCGGGCGGCGGC.......................................................................................................................................................... 18110.0010.00-10.00--------------------------------------------------------------------------------------------------
.........................................................................CCGCCGCCGCCGCCCGATCGG............................................................................................................................................................ 216.000.00-------1.00---2.00---1.00----------------------1.00---------------1.00---------------------------------------------
............................................................................CCGCCGCCGCCCGAGTCG............................................................................................................................................................ 184.000.00---3.00------------------------------------------------------------1.00-----------------------------------
................................................................................................AGGCCTGGGAGGACTCCGCGGC.................................................................................................................................... 2214.004.00-4.00--------------------------------------------------------------------------------------------------
..........................CTGATCTTCTGGGCGAAGGCG........................................................................................................................................................................................................... 2113.003.00----3.00-----------------------------------------------------------------------------------------------
............................................................................CCGCGGCTCTTTCTCGGGCGGCGGCGG................................................................................................................................................... 2712.002.00----2.00-----------------------------------------------------------------------------------------------
.......................................................................CGCCGCCGCCGCCGCCCTC................................................................................................................................................................ 192.000.00--------1.00------------------------------------------------1.00------------------------------------------
............................................................................CCGCCGCCGCCCGAGTCGG........................................................................................................................................................... 192.000.00---1.00--------------1.00---------------------------------------------------------------------------------
..........................GCTGATCTTCTGGGCGAAGGCG.......................................................................................................................................................................................................... 2212.002.00---------------1.00----------------------------------------------1.00-------------------------------------
.....................................................................................................CAGGCCTGGGAGGACTCC................................................................................................................................... 1812.002.00-------------2.00--------------------------------------------------------------------------------------
.................CGAGCGCCGCGCCTTTCA....................................................................................................................................................................................................................... 181.000.00----------------------------------------1.00-----------------------------------------------------------
........................TGATCTTCTGGGCGAAGGCGCG............................................................................................................................................................................................................ 2211.001.00--------------------------------------------1.00-------------------------------------------------------
......................................................................................................GGCCAGGCCTGGGAGGACTC................................................................................................................................ 2011.001.00----------------1.00-----------------------------------------------------------------------------------
...............................................................................................GCCAGGCCTGGGAGGACTCCGCGGCT................................................................................................................................. 2611.001.00---------------------------------------------------1.00------------------------------------------------
.....................................................................GGCGGCGGCGGCGGCGCG................................................................................................................................................................... 1801.001.00-------------------------------------------------------------------1.00--------------------------------
.........................ACCTGCTGATCTTCTGGGCGAAGGCGC...................................................................................................................................................................................................... 2711.001.00-----------1.00----------------------------------------------------------------------------------------
.........................................................................CCGCCGCCGCCGCCCAAT............................................................................................................................................................... 181.000.001.00---------------------------------------------------------------------------------------------------
......................................................................................................AGGCCAGGCCTGGGAGGACTC............................................................................................................................... 2111.001.00------------------------------------------------------------1.00---------------------------------------
.......................................................................CGCCGCCGCCGCCGCCCGAGCA............................................................................................................................................................. 221.000.00-----------------------------------------------------------------------1.00----------------------------
.....................................................................................................AGGCCAGGCCTGGGAGGACTCC............................................................................................................................... 2211.001.00------------------------1.00---------------------------------------------------------------------------
.....................................................................CGCGCCGCCGCCGCCGTCTT................................................................................................................................................................. 201.000.00------------------1.00---------------------------------------------------------------------------------
.......................................................................CGCCGCCGCCGCCGCCCGTTT.............................................................................................................................................................. 211.000.00---------------------------1.00------------------------------------------------------------------------
.........................................................................CCGCCGCCGCCGCCCAAC............................................................................................................................................................... 181.000.00--------------------------------------------------1.00-------------------------------------------------
................................................................TGGGGCGCGCCGCCGCGCTG...................................................................................................................................................................... 201.000.00-----------------------------------1.00----------------------------------------------------------------
.......................................................................CGCCGCCGCCGCCGCCCTGC............................................................................................................................................................... 201.000.00--------1.00-------------------------------------------------------------------------------------------
...........................GATCTTCTGGGCGAAGGC............................................................................................................................................................................................................. 1811.001.00-----------------------------------------------------1.00----------------------------------------------
......................................................................................................GAGTCCTCCCAGGCCTG................................................................................................................................... 171.000.00------------------------------1.00---------------------------------------------------------------------
........................CTGATCTTCTGGGCGAAGGCGCG........................................................................................................................................................................................................... 2311.001.00----------------------1.00-----------------------------------------------------------------------------
..........................TCTTCTGGGCGAAGGCG............................................................................................................................................................................................................... 1711.001.00-----------------------1.00----------------------------------------------------------------------------
.........................................................CGGCGGCGGCGCGCCCCACGCCGGA........................................................................................................................................................................ 2511.001.00-----1.00----------------------------------------------------------------------------------------------
.......................................................................CGCCGCCGCCGCCGCCCTCG............................................................................................................................................................... 201.000.00--------1.00-------------------------------------------------------------------------------------------
.....................................................................CGGCGGCGGCGGCGCG..................................................................................................................................................................... 1601.001.00-------------------------------------------------------------1.00--------------------------------------
..........................................................................................................................................................................................................................................AAGGCCGGGGTTCGA. 1511.001.00-------------------------------------1.00--------------------------------------------------------------
..........................................................................CGCCGCCGCCGCCCGAT............................................................................................................................................................... 171.000.00-----------------------1.00----------------------------------------------------------------------------
...............................................................................................GCCTGGGAGGACTCCGCGGCT...................................................................................................................................... 2111.001.00-----------------------------------------------1.00----------------------------------------------------
.........................................................................CCGCCGCCGCCGCCCGATCG............................................................................................................................................................. 201.000.00------------------------------------------------------------------------1.00---------------------------
...................................................................GGCGCGCCGCCGCCGCCGGCT.................................................................................................................................................................. 211.000.00---------------------------------------------------------------1.00------------------------------------
...................................................................GGCGCGCCGCCGCCGCCGCCAGA................................................................................................................................................................ 231.000.00------------------------1.00---------------------------------------------------------------------------
.........................................................................CCGCCGCCGCCGCCCGATC.............................................................................................................................................................. 191.000.00---------------1.00------------------------------------------------------------------------------------
.......................................................................CGCCGCCGCCGCCGCCCTCGG.............................................................................................................................................................. 211.000.00-------------1.00--------------------------------------------------------------------------------------
.......................................................................................................AGTCCTCCCAGGCCTGCAA................................................................................................................................ 191.000.00-----------------------------------------------------------------1.00----------------------------------
...............GCCGAGCGCCGCGCCTGGC........................................................................................................................................................................................................................ 191.000.00---------------------------------------------1.00------------------------------------------------------
.......................................................................CGCCGCCGCCGCCGCCCGAGG.............................................................................................................................................................. 211.000.00--------------1.00-------------------------------------------------------------------------------------
............................................................................CCGCCGCCGCCCGAGTC............................................................................................................................................................. 171.000.00---1.00------------------------------------------------------------------------------------------------
......................................................................................................CAGGCCTGGGAGGACTC................................................................................................................................... 1731.001.00-----1.00----------------------------------------------------------------------------------------------
...................................................................GGCGCGCCGCCGCCGCCGGGG.................................................................................................................................................................. 211.000.00----------------------------------------------1.00-----------------------------------------------------
.........................................................................CCGCCGCCGCCGCCCGAA............................................................................................................................................................... 181.000.00---------------------------------1.00------------------------------------------------------------------
................................ATTTACCTGCTGATCTTCTGGGCG.................................................................................................................................................................................................. 2411.001.00---------------------------------------------------------------------1.00------------------------------
.................................ACCTGCTGATCTTCTGGGC...................................................................................................................................................................................................... 1911.001.00------------------------------------1.00---------------------------------------------------------------
.................................................................GGGGCGCGCCGCCGCCGCCGCCCT................................................................................................................................................................. 241.000.00--------1.00-------------------------------------------------------------------------------------------
................................................................TGGGGCGCGCCGCCGGC......................................................................................................................................................................... 171.000.00------------------------------------------------------------------1.00---------------------------------
.....................................................................CGCGCCGCCGCCGCCGCCCGA................................................................................................................................................................ 211.000.00--------------1.00-------------------------------------------------------------------------------------
................................................................................................CTAGGCCAGGCCTGGGAGGACTCCGCGGC............................................................................................................................. 2911.001.00-----1.00----------------------------------------------------------------------------------------------
....................................................................................................AGGCCTGGGAGGACTCCG.................................................................................................................................... 1811.001.00----1.00-----------------------------------------------------------------------------------------------
..........................................................................CGCCGCCGCCGCCCGATAT............................................................................................................................................................. 191.000.00-------------------------1.00--------------------------------------------------------------------------
...........................GCTGATCTTCTGGGCGAAGGC.......................................................................................................................................................................................................... 2111.001.00----1.00-----------------------------------------------------------------------------------------------
.........................................................................CCGCCGCCGCCGCCCATGC.............................................................................................................................................................. 191.000.001.00---------------------------------------------------------------------------------------------------
..........................................................................................................................................................................GGCTCGCGGCGGGGCGGTC............................................................. 191.000.00-------------------------------------------1.00--------------------------------------------------------
...................................................................GGCGCGCCGCCGCCGCCGGG................................................................................................................................................................... 200.400.00------------------------------0.20------0.20--------------------------------------------------------------
...................................................................GGCGGCGGCGGCGCGCC...................................................................................................................................................................... 1750.400.400.20----------------------------------------------------------------------------0.20----------------------
......................................................................................................CCAGGCCTGGGAGGACTC.................................................................................................................................. 1830.330.33--------------------------------------------------------------------------------0.33-------------------
........................................................................................................................................................................................CCCGAACCCCTTCCG................................................... 1540.250.25---------------------0.25------------------------------------------------------------------------------