| (2) BREAST | (12) CELL-LINE | (1) CERVIX | (1) HEART | (1) HELA | (1) LIVER | (1) OTHER | (4) SKIN | (1) UTERUS | (1) XRN.ip |
| GAAAAAGTCTGGCTTGATCAAAAGGAAGATGATAAAAAATACATGAAGAGGTAAAATCAATTTATAATATTTCTAAAAGTCTGGATTGTAGTTTTAGAAACCTCACACGCTTCCTTATTTTCTTTTTTCATGTGATGCAGTCTGCAGAAAACAGCAAAAATCATGTATGTACTTATATTTTATATTTATA ................................................................................(((.((..((.....(((((..................))))).......))..)).))).................................................. ..........................................................................75...............................................................140................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR191612(GSM715722) 65genomic small RNA (size selected RNA from t. (breast) | SRR189785 | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191406(GSM715516) 67genomic small RNA (size selected RNA from t. (breast) | SRR038861(GSM458544) MM466. (cell line) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................CCTTATTTTCTTTTTTAATG.......................................................... | 20 | 134.00 | 0.00 | 71.00 | 53.00 | 9.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................GATGATAAAAAATACATGAAGAG............................................................................................................................................ | 23 | 1 | 8.00 | 8.00 | - | - | - | 7.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TCTGGATTGTAGTTTTAG............................................................................................. | 18 | 1 | 5.00 | 5.00 | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................CCTTATTTTCTTTTTTATTG.......................................................... | 20 | 4.00 | 0.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................CCTTATTTTCTTTTTTAATT.......................................................... | 20 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TCTTTTTTCATGTGATGCAGTCTGC............................................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TTATTTTCTTTTTTCGGTT......................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................CCTTATTTTCTTTTTTAATA.......................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TCTTTTTTCATGTGATGCAG.................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................GTGATGCAGTCTGCAGGA......................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................CAAAAATCATGTATGTACTTATA............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................CTAAAAGTCTGGATTGTAGTTTTAGAAACCTC...................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................TTTATAATATTTCTAAAAG............................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAAAATCAATTTATAATCTG....................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................TTTAGAAACCTCACACGCT............................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................GTATGTACTTATATTTTATATTT... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TCAATTTATAATATTTATTG.................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................GTATGTACTTATATTTTATATTTA.. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................CTTTTTTCATGTGATGCAGT................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................TCCTTATTTTCTTTTCTAC............................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................CTTTTTTCATGTGATGCAG.................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TTCCTTATTTTCTTTTTTTAT........................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................TTCCTTATTTTCTTTTTTATCA.......................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................CCTTATTTTCTTTTTTGATG.......................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................CTGCAGAAAACAGCAAAAATCA........................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................AAAGTCTGGATTGTAGTTTTAGAAAC......................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................AAGGAAGATGATAAACTGG...................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................CCTTATTTTCTTTTTTTATG.......................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................ACGCTTCCTTATTTT..................................................................... | 15 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | 0.25 | - |
| ...................AAAAGGAAGATGATAAAA......................................................................................................................................................... | 18 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| GAAAAAGTCTGGCTTGATCAAAAGGAAGATGATAAAAAATACATGAAGAGGTAAAATCAATTTATAATATTTCTAAAAGTCTGGATTGTAGTTTTAGAAACCTCACACGCTTCCTTATTTTCTTTTTTCATGTGATGCAGTCTGCAGAAAACAGCAAAAATCATGTATGTACTTATATTTTATATTTATA ................................................................................(((.((..((.....(((((..................))))).......))..)).))).................................................. ..........................................................................75...............................................................140................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR191612(GSM715722) 65genomic small RNA (size selected RNA from t. (breast) | SRR189785 | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191406(GSM715516) 67genomic small RNA (size selected RNA from t. (breast) | SRR038861(GSM458544) MM466. (cell line) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................CAAAAGGAAGATGATAGT.......................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |