ID: uc001cxg.2_intron_11_0_chr1_54722860_r.5p
GENE: (5)
chr1:54746911-54747160-


(2)
AGO2.ip 		(1)
B-CELL 		(5)
BREAST 		(9)
CELL-LINE 		(1)
FIBROBLAST 		(2)
LIVER 		(9)
OTHER 		(4)
SKIN

Sense strand
CCCCCAACGATGGGATGCCGGGAGGCCCCATCCCGCCAGGTTTCTTTCAGGTACGTGCGGGGCCCGTGGGTCTTGTGCTCCACCTTGTATTCCAGGCCGAGGCCCTGGGCAGGTGGGAGGGCGGGAGAGAAGTAAGTAGCTCAGTTTGCCATGGTCTAAATACAGTTGCTTTATGCTGGTTCAAATCCTTCCCTTCCCATCCCTTTCAACAGTCCTTCTAAAAGCTGAGAGGGAGAAAAAGATGGGAAAG
................................................................................................................................((((.((((((((..((((((....))..))))..))))))))......((.......))....))))......................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR189783SRR189785SRR343334SRR343335SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189787SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR189786
..................................................................................................................................................................................GTTCAAATCCTTCCCGCG......................................................1812.000.006.002.00--1.003.00-------------------------
..................................................................................................................................................................................GTTCAAATCCTTCCCGCGC.....................................................197.000.00----5.001.00-------1.00-----------------
.................................................................................................................................................................................GGTTCAAATCCTTCCCGA.......................................................186.000.003.003.00-----------------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCGATC............................195.000.00--3.001.00------1.00--------------------
.....................................................................................................................................AAGTAGCTCAGTTTGGT....................................................................................................174.000.00--------2.00----------1.00--1.00--------
.................................................................................................................................................................................GGTTCAAATCCTTCCCGCG......................................................194.000.001.001.00--1.001.00-------------------------
.................................................................................................................................................................................GGTTCAAATCCTTCCCGC.......................................................184.000.002.002.00-----------------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCTATC............................193.000.00---3.00---------------------------
..................................................................................................................................................................................GTTCAAATCCTTCCCGC.......................................................173.000.002.001.00-----------------------------
.....................................................................................................................................AAGTAGCTCAGTTTGGATC..................................................................................................193.000.00-------3.00-----------------------
.....................................................................................................................................AAGTAGCTCAGTTTGGTA...................................................................................................182.000.00---------1.00--------1.00------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCTCTT............................192.000.00---1.00------1.00--------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCGGTT............................192.000.00--1.001.00---------------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCGACC............................192.000.00------1.00----------1.00-------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCGGCT............................191.000.00--1.00----------------------------
..........................................................................................................................................................................................CCTTCCCTTCCCATCCCTTTCAACAG......................................2611.001.00-1.00-----------------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCGTTG............................191.000.00------------------------1.00------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCTGCT............................191.000.00---1.00---------------------------
.....................................................................................................................AGGGCGGGAGAGAAGTAAGTA................................................................................................................2111.001.00-------------------------1.00-----
...........................................................................................................................................................................................................TTTCAACAGTCCTTCTATT............................191.000.00-----------------------1.00-------
........................................................................................................................GCGGGAGAGAAGTAAGTAGC..............................................................................................................2011.001.00------------1.00------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCTGTT............................191.000.00--1.00----------------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCGATT............................191.000.00--1.00----------------------------
.....................................................................................................................................AAGTAGCTCAGTTTGGTAG..................................................................................................191.000.00---------1.00---------------------
..................................................................................................................................................................................GTTCAAATCCTTCCCGCA......................................................181.000.001.00------------------------------
.................................................................................................................................................................................GGTTCAAATCCTTCCCG........................................................171.000.001.00------------------------------
..............................................................................................................................................................................................................................AGCTGAGAGGGAGAAAAAGATGGGAAAG2811.001.00--------------------1.00----------
.............................................................................................................................................................................................................................AAGCTGAGAGGGAGAATGTA.........201.000.00---------------------1.00---------
......................................................................................GTATTCCAGGCCGAGGG...................................................................................................................................................171.000.00------1.00------------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCTACT............................191.000.00--1.00----------------------------
................................................................................................................GTGGGAGGGCGGGAGAGGGCT.....................................................................................................................211.000.00--------------1.00----------------
...........................................................................................................................................................................................................................AAAAGCTGAGAGGGAGA..............1731.001.00-----------0.67------------------0.33
............................................................................................................................................................................................................TTCAACAGTCCTTCTG..............................161.000.00------1.00------------------------
...........................................................................................................................................................................................................TTTCAACAGTCCTTCGATA............................191.000.00---1.00---------------------------
...........................................................................................................................................................................................................................AAAAGCTGAGAGGGAGTA.............181.000.00-----------1.00-------------------
...........................................................................................................................................................................................................................AAAAGCTGAGAGGGAGAA.............1811.001.00------1.00------------------------
..................................................................................................................................................................................GTTCAAATCCTTCCCG........................................................161.000.00-----1.00-------------------------
.CCCCAACGATGGGATGCCGGGAGGCCCC.............................................................................................................................................................................................................................2820.500.50---------------------------0.50---
............................................................................................................................................................................................................................AAAGCTGAGAGGGAGAAA............1820.500.50------0.50------------------------
............................................................................................CAGGCCGAGGCCCTGGG.............................................................................................................................................1720.500.50----------------------------0.50--
...........................CCATCCCGCCAGGTTTC..............................................................................................................................................................................................................1730.330.33-----------------------------0.33-

Antisense strand
CCCCCAACGATGGGATGCCGGGAGGCCCCATCCCGCCAGGTTTCTTTCAGGTACGTGCGGGGCCCGTGGGTCTTGTGCTCCACCTTGTATTCCAGGCCGAGGCCCTGGGCAGGTGGGAGGGCGGGAGAGAAGTAAGTAGCTCAGTTTGCCATGGTCTAAATACAGTTGCTTTATGCTGGTTCAAATCCTTCCCTTCCCATCCCTTTCAACAGTCCTTCTAAAAGCTGAGAGGGAGAAAAAGATGGGAAAG
................................................................................................................................((((.((((((((..((((((....))..))))..))))))))......((.......))....))))......................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR189783SRR189785SRR343334SRR343335SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189787SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR189786
..................................................................................................................GGGAGGGCGGGAGAGAGAA..................................................................................................................... 191.000.00--1.00----------------------------
........................................................................................................................................................................................................................................GAGAAAAAGATGGGAAATAAG 211.000.00--------------------------1.00----
.................................................GGTACGTGCGGGGCCAGCC...................................................................................................................................................................................... 191.000.00------1.00------------------------
.....................................................................................................................................AAGTAGCTCAGTTTGCT.................................................................................................... 171.000.00---------------1.00---------------
........................GCCCCATCCCGCCAGGCG................................................................................................................................................................................................................ 181.000.00----------------1.00--------------