| (3) B-CELL | (3) BRAIN | (9) BREAST | (17) CELL-LINE | (3) CERVIX | (1) FIBROBLAST | (12) LIVER | (1) OTHER | (1) RRP40.ip | (3) SKIN | (1) TESTES | (4) UTERUS | (1) XRN.ip |
| CTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGTACTGAGGCAAAGGTGGCCTGGCATGGAGGCCAAGGCACAGTCTGAGACTTAGCCTTAAACAGGGACCAGCAGCTTTGTACAGAGGTGAAGTTTCAGGGCCCAGCTTTCCAGTCCACCTTTGGCATTGGTTTCTGCCTCAGGATCACAGAGACCATTTGGCCACAGTGGGCACAAAGCTCCCTGCCTCTACCATGAGAG ..................................................................................................................((((.(((.((((((.((.........))..))))))...))).....)))).(((..((((........))))..)))......................................................... ..................................................................................................................115..................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189787 | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037937(GSM510475) 293cand2. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR444064(SRX128912) Sample 21cDNABarcode: AF-PP-334: ACG CTC TTC . (cell line) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577580(Rovira) total RNA. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR343336 | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577744(Rovira) total RNA. (breast) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | TAX577743(Rovira) total RNA. (breast) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577590(Rovira) total RNA. (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | TAX577738(Rovira) total RNA. (breast) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | TAX577746(Rovira) total RNA. (breast) | SRR040029(GSM532914) G026T. (cervix) | SRR191633(GSM715743) 85genomic small RNA (size selected RNA from t. (breast) | SRR040036(GSM532921) G243N. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | TAX577741(Rovira) total RNA. (breast) | SRR029126(GSM416755) 143B. (cell line) | SRR189786 | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR029131(GSM416760) MCF7. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR038856(GSM458539) D11. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | TAX577745(Rovira) total RNA. (breast) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................AGCAGCTTTGTACAGGG.................................................................................................................. | 17 | 9 | 15.67 | 0.33 | - | 5.11 | 5.11 | - | 3.22 | - | 2.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGAGCTAT.............................................................................................................. | 21 | 7.00 | 0.00 | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGGGC................................................................................................................. | 18 | 9 | 6.22 | 0.33 | - | 0.78 | 1.00 | 0.67 | 0.11 | 0.11 | 0.67 | - | - | 0.11 | - | 0.56 | 0.22 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | 0.33 | - | 0.11 | - | 0.11 | - | 0.11 | - | - | 0.11 | - | 0.11 | - | 0.11 | - | - | - | 0.11 | 0.11 | 0.11 | - | - | - | 0.11 | - | 0.11 | - | 0.11 | - | 0.11 |
| .......................................................................................................................AGCAGCTTTGTACAGGGCT................................................................................................................ | 19 | 9 | 4.33 | 0.33 | 0.11 | 0.11 | 0.56 | 0.11 | 0.11 | 0.11 | 0.22 | - | - | 0.11 | - | 0.33 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | 0.11 | 0.33 | 0.22 | - | - | - | - | 0.22 | 0.22 | - | 0.22 | - | 0.11 | - | 0.11 | 0.11 | 0.11 | - | - | - | 0.11 | 0.11 | - | - | - | - | 0.11 | - | 0.11 | - |
| .............................TGGTGATGGAGTACGTTGAAGG....................................................................................................................................................................................................... | 22 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGAGA................................................................................................................. | 18 | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGCTAG.............................................................................................................. | 21 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGGTAGGA............................................................................................................ | 23 | 2.00 | 0.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................CAGCAGCTTTGTACAGG................................................................................................................... | 17 | 2.00 | 0.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................AGTACGTTGAAGGTA..................................................................................................................................................................................................... | 15 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGAGACAT.............................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................TGAGACTTAGCCTTAAACAGGGACCAGCA............................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTCTGCCTCAGGATACCA................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGCGAT.............................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGCTAC.............................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGGTATGT............................................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................TGGTGATGGAGTACGTTGAAGGGGGA................................................................................................................................................................................................... | 26 | 1 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGAGGTATGA............................................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGCTAA.............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGGTACGA............................................................................................................ | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................CAGCAGCTTTGTACAGGG.................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................GAGGCCAAGGCACAGTCGCA......................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................CATGGAGGCCAAGGCGCAG.............................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................AGACTTAGCCTTAAACAGGGACCAGCAG.............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGAGACAC.............................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................TGGCATTGGTTTCTGAAAA............................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGC................................................................................................................. | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGTTAT.............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGCT................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................CTTTGTACAGAGGTGCCA............................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGATAT.............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGCG................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGATGT.............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGAGCGCT.............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGCAGCTTTGTACAGGT.................................................................................................................. | 17 | 9 | 0.67 | 0.33 | - | 0.22 | 0.33 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCCAGTCCACCTTTGG............................................................................ | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGAGG................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGAGGCAG.............................................................................................................. | 21 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGGA................................................................................................................. | 18 | 9 | 0.33 | 0.33 | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAG.................................................................................................................... | 15 | 9 | 0.33 | 0.33 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - |
| ...........................................GTTGAAGGTACTGAGG............................................................................................................................................................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGA.................................................................................................................. | 17 | 9 | 0.22 | 0.33 | - | - | - | - | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGTC................................................................................................................. | 18 | 9 | 0.22 | 0.33 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................GCATTGGTTTCTGCC.............................................................. | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGTAA................................................................................................................. | 18 | 9 | 0.11 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGCCT................................................................................................................ | 19 | 9 | 0.11 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGCTG................................................................................................................ | 19 | 9 | 0.11 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGCGTT................................................................................................................ | 19 | 9 | 0.11 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGTTT................................................................................................................ | 19 | 9 | 0.11 | 0.33 | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGAA................................................................................................................. | 18 | 9 | 0.11 | 0.33 | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGGGT................................................................................................................ | 19 | 9 | 0.11 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGGGAT................................................................................................................ | 19 | 9 | 0.11 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGTTAT................................................................................................................ | 19 | 9 | 0.11 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................AGCAGCTTTGTACAGCG.................................................................................................................. | 17 | 9 | 0.11 | 0.33 | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGTACTGAGGCAAAGGTGGCCTGGCATGGAGGCCAAGGCACAGTCTGAGACTTAGCCTTAAACAGGGACCAGCAGCTTTGTACAGAGGTGAAGTTTCAGGGCCCAGCTTTCCAGTCCACCTTTGGCATTGGTTTCTGCCTCAGGATCACAGAGACCATTTGGCCACAGTGGGCACAAAGCTCCCTGCCTCTACCATGAGAG ..................................................................................................................((((.(((.((((((.((.........))..))))))...))).....)))).(((..((((........))))..)))......................................................... ..................................................................................................................115..................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189787 | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037937(GSM510475) 293cand2. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR444064(SRX128912) Sample 21cDNABarcode: AF-PP-334: ACG CTC TTC . (cell line) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577580(Rovira) total RNA. (breast) | SRR040010(GSM532895) G529N. (cervix) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR343336 | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577744(Rovira) total RNA. (breast) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | TAX577743(Rovira) total RNA. (breast) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577590(Rovira) total RNA. (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | TAX577738(Rovira) total RNA. (breast) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | TAX577746(Rovira) total RNA. (breast) | SRR040029(GSM532914) G026T. (cervix) | SRR191633(GSM715743) 85genomic small RNA (size selected RNA from t. (breast) | SRR040036(GSM532921) G243N. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | TAX577741(Rovira) total RNA. (breast) | SRR029126(GSM416755) 143B. (cell line) | SRR189786 | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR029131(GSM416760) MCF7. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR038856(GSM458539) D11. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | TAX577745(Rovira) total RNA. (breast) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................CCCAGCTTTCCAGTCCAGGG................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TGGTCTCTGTGATCCTGAGGCAGAA............................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................CCCTGCCTCTACCATGGGT. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................CATGGTAGAGGCAGGGAG.... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |