ID: uc001cos.3_intron_8_0_chr1_46212134_r.5p
GENE: (1)
chr1:46216069-46216318-


(1)
AGO2.ip
(15)
B-CELL
(23)
BREAST
(37)
CELL-LINE
(9)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(2)
HELA
(1)
KIDNEY
(4)
LIVER
(4)
OTHER
(1)
RRP40.ip
(41)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
ACTGCGCGCGCAGGGCCTGAGCGGGCGCCGGAGGGAAGGGGAAGCGGCGGGTAAGGAGGGCCTGCGTTCGGGCGCGTCTGTGACGGGGTTGGGAACTTCCTCTTCTACTCCCTCCGGCTTTCCGGACCCCTGAGGACTGGAGTGAGAGAAGCCTCTAGAACTGTGTATTTCCTTGTCTTTCCTTCTGCCGCCGCAGGCCTTCCTCCGACAGTCTAAGTGTCGCCCTCCCCAGACCTTCTCGTCCGGACCG
...............................................................((((....)))).......((((..(((((..((((((((((((.(((.(((((....))))).......))).))))).))).))))..)))))..))))......................................................................................
..............................................................63........................................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577453(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040007(GSM532892)
G601T. (cervix)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................GAGAAGCCTCTAGAACTGTG.....................................................................................20120.0020.009.003.00-1.00--------------1.00-------------------1.00------1.00----------1.00--------1.00-------------------------------1.00-----------------------------1.00----------------
..............................................GCGGGTAAGGAGGGCCTG..........................................................................................................................................................................................18115.0015.001.001.00---1.00----2.00--------------1.00--------------1.00-1.001.00---2.00-----------1.00-----------------1.00---------1.00------------1.00-------------------------------------------
.................................................................................................................................................GAGAAGCCTCTAGAACTG.......................................................................................18114.0014.00-2.004.00-5.00----2.00------------------------------------------------------------------------------------1.00-------------------------------------------------
...................................................................................................................................GAGGACTGGAGTGAGAGAAGC..................................................................................................21110.0010.002.00-1.00---------1.004.00--1.00-------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGGACTGGAGTGAGAGAAGC..................................................................................................2019.009.005.00----1.00--------------------------1.00---2.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................AGGACTGGAGTGAGAGAAG...................................................................................................1919.009.00----1.001.00-2.00--3.00---------1.00-----------------------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................................................................GTGTATTTCCTTGTCTTTCCTTCTGC..............................................................2617.007.00---7.00--------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GTGAGAGAAGCCTCTAGAAC.........................................................................................2014.004.004.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................GACTGGAGTGAGAGAAGC..................................................................................................1814.004.00--1.00-1.00---1.00------------------------------1.00--------------------------------------------------------------------------------------------------------
...............................................CGGGTAAGGAGGGCCTGC.........................................................................................................................................................................................1814.004.00----------------------------2.00-------------------------1.00---------------------------------------------------------------------1.00-------------------
....................................................................................................................................AGGACTGGAGTGAGAGAA....................................................................................................1814.004.00--1.00--1.00-----------------------1.00----------------1.00-------------------------------------------------------------------------------------------------
...........................................GCGGCGGGTAAGGAGGGC.............................................................................................................................................................................................1813.003.00------1.00--1.00--------------------------------------------------------------------------------------------------------1.00-----------------------------
...................................................................TCGGGCGCGTCTGTGACGGG...................................................................................................................................................................2013.003.00-----------3.00------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TGAGGACTGGAGTGAGAGAAGC..................................................................................................2213.003.00-------2.00------------------------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................GAGAGAAGCCTCTAGAACTG.......................................................................................2013.003.00-2.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................CCCCTGAGGACTGGAGTGAGAGAAGC..................................................................................................2613.003.00------------3.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................ACGGGGTTGGGAACTTC.......................................................................................................................................................1713.003.00---3.00--------------------------------------------------------------------------------------------------------------------------------------------
........................................................AGGGCCTGCGTTCGGGC.................................................................................................................................................................................1713.003.00--1.00-1.001.00------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................GACTGGAGTGAGAGAAGCCT................................................................................................2012.002.00----------------1.00-------------------------------------------------------------------------------------------1.00-----------------------------------
.............................................................................................................................ACCCCTGAGGACTGGAGTGAG........................................................................................................2112.002.00------2.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGGACTGGAGTGAGAGAAGCCT................................................................................................2212.002.00------------------------------------------------1.00-------------------------------------------1.00---------------------------------------------------
...................................................................................................................................GAGGACTGGAGTGAGAGAA....................................................................................................1912.002.00-------------------------------------------------------------------------------------------------------1.00---1.00------------------------------------
........................................................................................................................TCCGGACCCCTGAGGACTG...............................................................................................................1912.002.00-------------------------1.00---------------------------------1.00------------------------------------------------------------------------------------
...............................................................GCGTTCGGGCGCGTCTGTGACGGG...................................................................................................................................................................2412.002.00-----------------------------------1.00-------------------------------------------------------------------------------------------------1.00----------
....................................................................................................................................AGGACTGGAGTGAGAGAAGCC.................................................................................................2112.002.00--------------------1.00----------------------------------------1.00----------------------------------------------------------------------------------
..TGCGCGCGCAGGGCCTGAGCGGGCGCCGG...........................................................................................................................................................................................................................2912.002.00-------------------------------------2.00----------------------------------------------------------------------------------------------------------
.............................................................................CTGTGACGGGGTTGGGAACTTC.......................................................................................................................................................2212.002.00--1.00----------------------------------------------------------------------------------------1.00----------------------------------------------------
........................................................................................................................................CTGGAGTGAGAGAAGCCT................................................................................................1812.002.00--------1.00------------------------------------------------------------------------------------------------1.00--------------------------------------
...............................................CGGGTAAGGAGGGCCTGCG........................................................................................................................................................................................1912.002.00---------------------------------2.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGGACTGGAGTGAGAGAAAA..................................................................................................2012.004.00-----------------------------------------2.00------------------------------------------------------------------------------------------------------
...................................................................................................................................GAGGACTGGAGTGAGAGAAG...................................................................................................2012.002.00-------2.00----------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AGAGAAGCCTCTAGAACTGTG.....................................................................................2112.002.001.00-------------------------------------------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................GTGAGAGAAGCCTCTAGAACTG.......................................................................................2212.002.00--2.00---------------------------------------------------------------------------------------------------------------------------------------------
..............................................GCGGGTAAGGAGGGCCTGCG........................................................................................................................................................................................2012.002.00---------------1.00-----------------------------------------------------1.00--------------------------------------------------------------------------
..........................GCCGGAGGGAAGGGGAATT.............................................................................................................................................................................................................192.000.00---------------2.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................ACCCCTGAGGACTGGAGTG..........................................................................................................1912.002.00-----------------1.00---------------------1.00--------------------------------------------------------------------------------------------------------
....................................................................CGGGCGCGTCTGTGACGGGGT.................................................................................................................................................................2112.002.00--------2.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................AAGCGGCGGGTAAGGAGGGC.............................................................................................................................................................................................2012.002.00------2.00-----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GAGAAGCCTCTAGAACTGTGTATT.................................................................................2412.002.00-1.00--------------------------------------------------------------------------------------------------------------------------------1.00-------------
..................................................................TTCGGGCGCGTCTGTGACGGG...................................................................................................................................................................2112.002.00-----------------------1.00-----------------------------------------------------------------1.00------------------------------------------------------
.................................................................................GACGGGGTTGGGAACTTC.......................................................................................................................................................1812.002.00---------------------------------------------1.00---------------------------1.00----------------------------------------------------------------------
.........................CGCCGGAGGGAAGGGGAAGCGG...........................................................................................................................................................................................................2212.002.00-------2.00----------------------------------------------------------------------------------------------------------------------------------------
................................................................................TGACGGGGTTGGGAACTT........................................................................................................................................................1812.002.00----1.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------
..........................................AGCGGCGGGTAAGGAGGG..............................................................................................................................................................................................1812.002.00------1.00----------------1.00------------------------------------------------------------------------------------------------------------------------
...............................................CGGGTAAGGAGGGCCTG..........................................................................................................................................................................................1712.002.00-----------2.00------------------------------------------------------------------------------------------------------------------------------------
..............................GAGGGAAGGGGAAGCGGC..........................................................................................................................................................................................................1812.002.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................CGGCTTTCCGGACCCCTG......................................................................................................................1812.002.00---------1.00------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................AAGCCTCTAGAACTGTGTATTTC...............................................................................2312.002.00----------------------------------------------------2.00-------------------------------------------------------------------------------------------
...............................................................................................................................................GAGAGAAGCCTCTAGAACTGTGTA...................................................................................2412.002.00--------------------------1.00---------------------------------------------------------1.00-----------------------------------------------------------
.................................................GGTAAGGAGGGCCTGTGC.......................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------------------1.00---------------------------------
.............................................GGCGGGTAAGGAGGGCCTG..........................................................................................................................................................................................1911.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACTGGAGTGAGAGAAGCCTC...............................................................................................2011.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
............................................CGGCGGGTAAGGAGGACC............................................................................................................................................................................................181.000.00------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................CGGCTTTCCGGACCCCTGAGG...................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------------------------1.00------------------------------
.................................................................................................................................................GAGAAGCCTCTAGAACAG.......................................................................................181.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
.........................................AAGCGGCGGGTAAGGAGG...............................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00------------
...................................................................................................................................................................................................GGCCTTCCTCCGACAGTCTAAGT................................2311.001.00--------------------------------------------------------------------------------1.00---------------------------------------------------------------
...................................................................................................................................GAGGACTGGAGTGAGAGAAGCCTCTA.............................................................................................2611.001.00---------------------------------------------------------------------------------------------------------------1.00--------------------------------
.........................................................................................................................................TGGAGTGAGAGAAGCCTC...............................................................................................1811.001.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------
..............................................GCGGGTAAGGAGGGCCTGCGTTCGG...................................................................................................................................................................................2511.001.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------
.......................................................................................................................TTCCGGACCCCTGAGGA..................................................................................................................1711.001.00---------------------------------------------------------------------------------1.00--------------------------------------------------------------
...........................................GCGGCGGGTAAGGAGGGCCC...........................................................................................................................................................................................201.000.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................................TTCGGGCGCGTCTGTGAC......................................................................................................................................................................1811.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CCCTGAGGACTGGAGTGAGAGAAG...................................................................................................2411.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------
....................................................................CGGGCGCGTCTGTGACGGGG..................................................................................................................................................................2011.001.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TGAGGACTGGAGTGAGAGAAA...................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00-------------------------------------
.....................CGGGCGCCGGAGGGAAGGG..................................................................................................................................................................................................................1911.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------
.................................................................................GACGGGGTTGGGAACTTTTTT....................................................................................................................................................2111.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
........................................................AGGGCCTGCGTTCGGGCG................................................................................................................................................................................1811.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................AGAAGCCTCTAGAACTGT......................................................................................1811.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................................GGGCCTGCGTTCGGGCCT...............................................................................................................................................................................181.000.00------------------------------------------------------------------------------------------------------------------------------1.00-----------------
................................................................................................................................................................................................................................CTCCCCAGACCTTCTCGT........1811.001.00------------------------------------------------------------------------1.00-----------------------------------------------------------------------
...................................................................................................................................GAGGACTGGAGTGAGAGAAGCCTCT..............................................................................................2511.001.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...........................CCGGAGGGAAGGGGAAGCGGC..........................................................................................................................................................................................................2111.001.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------
............................................................................................................................GACCCCTGAGGACTGGAGTGAG........................................................................................................2211.001.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------
......CGCGCAGGGCCTGAGCGGG.................................................................................................................................................................................................................................1911.001.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------
......................................................................................................................TTTCCGGACCCCTGAGGACTG...............................................................................................................2111.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCCCTGAGGACTGGAGTGAGAG......................................................................................................2211.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GCGTTCGGGCGCGTCTGTGACA.....................................................................................................................................................................221.000.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------
............................................CGGCGGGTAAGGAGGGCCT...........................................................................................................................................................................................1911.001.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCTAGAACTGTGTATTTCCT.............................................................................2011.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------------------
...............................................CGGGTAAGGAGGGCCTGCGTTCGGGC.................................................................................................................................................................................2611.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGGGCCTGCGTTCGGGCGCGTCTGTGA.......................................................................................................................................................................3311.001.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................GCCTGCGTTCGGGCGCGTCTGTGAC......................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------------------------------------------------1.00------------------------
.............................................................................CTGTGACGGGGTTGGGAA...........................................................................................................................................................1811.001.00----------------------------------------------------------------------------------1.00-------------------------------------------------------------
................................................................................................................................................AGAGAAGCCTCTAGAACTG.......................................................................................1911.001.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------
........................................................AGGGCCTGCGTTCGGGCGC...............................................................................................................................................................................1911.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
............................CGGAGGGAAGGGGAAGCG............................................................................................................................................................................................................1811.001.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------
.CTGCGCGCGCAGGGCCTGAGC....................................................................................................................................................................................................................................2111.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CCCTGAGGACTGGAGTGA.........................................................................................................1811.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................GCGGGCGCCGGAGGGGTT....................................................................................................................................................................................................................181.000.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------
.......................................................................................................................TTCCGGACCCCTGAGGACTGGAGTGAGAGAAGC..................................................................................................3311.001.00------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..............................................GCGGGTAAGGAGGGCCT...........................................................................................................................................................................................1711.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------
.............................GGAGGGAAGGGGAAGCGGCG.........................................................................................................................................................................................................2011.001.00----------------------------------1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................CGGACCCCTGAGGACTGGAGTGAG........................................................................................................2411.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGCTTTCCGGACCCCTGAG....................................................................................................................1911.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................GTGACGGGGTTGGGAACTT........................................................................................................................................................1911.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00--------
................................................................................................................................CCTGAGGACTGGAGTGAGAGAAGC..................................................................................................2411.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------
...............................................CGGGTAAGGAGGGCCTGCGTTCGGGCGCGTC............................................................................................................................................................................3111.001.00-------------------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................GCTTTCCGGACCCCTGAGGA..................................................................................................................2011.001.00-------------------------------------------------------------------------------------------------------------------1.00----------------------------
.........................................................................................................................CCGGACCCCTGAGGACTGGA.............................................................................................................2011.001.00----------------------------------------------------------------------------------------------------------------1.00-------------------------------
....................................................................................................................GCTTTCCGGACCCCTGAGGACTGG..............................................................................................................2411.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
............................................CGGCGGGTAAGGAGGGCCTGCGT.......................................................................................................................................................................................2311.001.00---------------------------------------------------------------------------------------------------1.00--------------------------------------------
..................................................................................................................................TGAGGACTGGAGTGAGAG......................................................................................................1821.001.00---0.50-0.50------------------------------------------------------------------------------------------------------------------------------------------
....................GCGGGCGCCGGAGGGGCCG...................................................................................................................................................................................................................191.000.00-------------------1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................GCCTGCGTTCGGGCGCGTCTG..........................................................................................................................................................................2111.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................GAGGACTGGAGTGAGAGATT...................................................................................................201.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCCCTGAGGACTGGAGTGAGAGAAGCCTCT..............................................................................................3011.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------
............................................CGGCGGGTAAGGAGGGC.............................................................................................................................................................................................1711.001.00---------------------------------------------------------------------------------------------1.00--------------------------------------------------
..............................................GCGGGTAAGGAGGGCCTGCGTT......................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------------------------------------------------1.00-----------------------
........................................GAAGCGGCGGGTAAGGAG................................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00--------------------------------------------------------------------------------
......................GGGCGCCGGAGGGAAGGGGAAGCGGCGGGTAA....................................................................................................................................................................................................3211.001.00-------------------------------------------------------------------1.00----------------------------------------------------------------------------
.....................................................AGGAGGGCCTGCGTTCGGGCGC...............................................................................................................................................................................2211.001.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------
...............................................................................................................................CCCTGAGGACTGGAGTGAGAGAAGC..................................................................................................2511.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................CCGGACCCCTGAGGACTGGAG............................................................................................................2111.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TTCTCGTCCGGACCGATC181.000.00-----------------------------------------------------------------------------------------------------1.00------------------------------------------
..................................................................................................................................TGAGGACTGGAGTGAGAGAA....................................................................................................2011.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------
...............................AGGGAAGGGGAAGCGGCG.........................................................................................................................................................................................................1811.001.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------
...GCGCGCGCAGGGCCTGAGCGGGC................................................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------------------------------------------------------1.00-------
...............................................................................GTGACGGGGTTGGGAACTTC.......................................................................................................................................................2011.001.00----------------------------------------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................ACTGGAGTGAGAGAAGCCT................................................................................................1911.001.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------
.............................................................CTGCGTTCGGGCGCGGG............................................................................................................................................................................171.000.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGGACTGGAGTGAGAGAAGCAA................................................................................................2211.009.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------
...............................AGGGAAGGGGAAGCGGCGGG.......................................................................................................................................................................................................2011.001.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................AAGGAGGGCCTGCGTTCGGG..................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------------------------------------------------1.00-------------------------
....CGCGCGCAGGGCCTGAGCGGG.................................................................................................................................................................................................................................2111.001.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................ACCCCTGAGGACTGGAGTGAGAGAAG...................................................................................................2611.001.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CTGGAGTGAGAGAAGCCTCTAGAACTGTGTA...................................................................................3111.001.00-------------------------------------------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................GGACTGGAGTGAGAGAAGCCTCTAGA...........................................................................................2611.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTCTGCCGCCGCAGGC....................................................1611.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------
..........................................................................................GGGAACTTCCTCTTCTAC..............................................................................................................................................1811.001.00---------------------------------------------------------------------------------------------------------------------------------1.00--------------
............................CGGAGGGAAGGGGAAGCGGCGGGTAAGGAGGGC.............................................................................................................................................................................................3311.001.00--------------------------------------------------------------------------------------------------------------------------------1.00---------------
..............................GAGGGAAGGGGAAGCGGAG.........................................................................................................................................................................................................191.000.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------
...............................................................................................................CTCCGGCTTTCCGGACCCCTGAGGACTG...............................................................................................................2811.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00---------
...........................................................................................................................GGACCCCTGAGGACTGGAGTGAG........................................................................................................2311.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CCCTGAGGACTGGAGTGAG........................................................................................................1911.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................GACGGGGTTGGGAACTT........................................................................................................................................................1711.001.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------
...........................................................................................................................................GAGTGAGAGAAGCCTCTAGAA..........................................................................................2111.001.00-------------------------------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................TCCGGACCCCTGAGGACTGG..............................................................................................................2011.001.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------
.........................................................................GCGTCTGTGACGGGGTTGG..............................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------1.00------------------------------------------------
....................................................................................................................................AGGACTGGAGTGAGAGAAGCCTCTA.............................................................................................2511.001.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TGAGAGAAGCCTCTAGAACTG.......................................................................................2111.001.00--------------------------------------------------1.00---------------------------------------------------------------------------------------------
............................................CGGCGGGTAAGGAGGGCC............................................................................................................................................................................................1811.001.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................CTGCGTTCGGGCGCGTCTGTGACGGGGTTGG..............................................................................................................................................................3111.001.00------------------------------------------------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................TCCGGACCCCTGAGGACTGGAG............................................................................................................2211.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
............................................CGGCGGGTAAGGAGGGCCTG..........................................................................................................................................................................................2011.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CTCTAGAACTGTGTATTT................................................................................1811.001.00----------------------------------------------------------------------------------------1.00-------------------------------------------------------
........CGCAGGGCCTGAGCGGGCGCCGGAGGG.......................................................................................................................................................................................................................2711.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------------------
..............................GAGGGAAGGGGAAGCGGCGGG.......................................................................................................................................................................................................2111.001.00----------------------------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................GGGCCTGCGTTCGGGCGCG..............................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------1.00------------------------------------------------------------
............................................................................................................................GACCCCTGAGGACTGGAG............................................................................................................1811.001.00-----------------------------------------------------------------------------------------------------------------------------1.00------------------
....................................................................................................................................................AAGCCTCTAGAACTGTGT....................................................................................1811.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGGACTGGAGTGAGAGAAGCCTAG..............................................................................................2411.002.00-------------------------------------------------------------------------------------1.00----------------------------------------------------------
.............................................................................................................................................GTGAGAGAAGCCTCTAGAACT........................................................................................2111.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CCCTGAGGACTGGAGTGAGAGAA....................................................................................................2311.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................CTGAGGACTGGAGTGAGAGAAG...................................................................................................2211.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------
.............................................................CTGCGTTCGGGCGCGTCTGTG........................................................................................................................................................................2111.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................CCTTCTGCCGCCGCAGGC....................................................1811.001.00---------------------------------------------------------------------------------------------------------------------1.00--------------------------
....................................................................................................................GCTTTCCGGACCCCTGAGGACT................................................................................................................2211.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................GAGGACTGGAGTGAGAGAAGCCT................................................................................................2311.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................................TTCGGGCGCGTCTGTGACGG....................................................................................................................................................................2011.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................CGGACCCCTGAGGACTGG..............................................................................................................1811.001.00------------------------------------------------------------------------------------------1.00-----------------------------------------------------
....................................................................CGGGCGCGTCTGTGACGGGGTTGGG.............................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------------------------------------------1.00----------------------
..................................GAAGGGGAAGCGGCGGTG......................................................................................................................................................................................................181.000.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------
..............................................GCGGGTAAGGAGGGCCTGCGTTCGGGCGCGTCT...........................................................................................................................................................................3311.001.00-------------------------------------------------------1.00----------------------------------------------------------------------------------------
.................................................................................................................................................GAGAAGCCTCTAGAACTGTGTA...................................................................................2211.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................................................GACTGGAGTGAGAGAAG...................................................................................................1730.670.67-----------------------------------------------------------------------------------------------------------------------------------------0.67------
...................................AAGGGGAAGCGGCGGG.......................................................................................................................................................................................................1620.500.50------------------------------------------------------------------------------------------------------------------------------------------0.50-----
...........AGGGCCTGAGCGGGCGCC.............................................................................................................................................................................................................................1820.500.50------------------------------------------------------------0.50-----------------------------------------------------------------------------------
.............................................................................................................................ACCCCTGAGGACTGGAGAGAG........................................................................................................2120.500.50------0.50-----------------------------------------------------------------------------------------------------------------------------------------
...........................................GCGGCGGGTAAGGAG................................................................................................................................................................................................1520.500.50--------------------------------------------------------------------------------------------------------------------------------------------0.50---
...........................................................................................................................................................TAGAACTGTGTATTTCCTT............................................................................1920.500.50--------------------------------------------------------------0.50---------------------------------------------------------------------------------
..........................................AGCGGCGGGTAAGGAG................................................................................................................................................................................................1620.500.50---------------------------------------------------------------0.50--------------------------------------------------------------------------------
...............................AGGGAAGGGGAAGCGGC..........................................................................................................................................................................................................1720.500.50-------------------------------------------------------------------------------------------------------------------------------------------0.50----
.....................................................................................................................................GGACTGGAGTGAGAGAAG...................................................................................................1820.500.50-------------------------------------------------------------0.50----------------------------------------------------------------------------------
.............................................................................................................................ACCCCTGAGGACTGGAG............................................................................................................1720.500.50----0.50-------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACTGGAGTGAGAGAAGC..................................................................................................1720.500.50-----0.50------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCCCTGAGGACTGGAGTG..........................................................................................................1820.500.50----------------------------------------------------------------0.50-------------------------------------------------------------------------------
..............................................................................................................................CCCCTGAGGACTGGAGT...........................................................................................................1730.330.33-----0.33------------------------------------------------------------------------------------------------------------------------------------------
............................CGGAGGGAAGGGGAAG..............................................................................................................................................................................................................1630.330.33------------------------------------------------------------------0.33-----------------------------------------------------------------------------
..............................................GCGGGTAAGGAGGGC.............................................................................................................................................................................................1530.330.33-------------------------------------------------------------------0.33----------------------------------------------------------------------------
..................................................GTAAGGAGGGCCTGC.........................................................................................................................................................................................1570.290.29--------------------------0.29---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GAAGCCTCTAGAACTGTG.....................................................................................1840.250.25-0.25----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CTGGAGTGAGAGAAGC..................................................................................................1650.200.20-----------------------------------------------------------------------------------------------------------------------------------------------0.20

Antisense strand
ACTGCGCGCGCAGGGCCTGAGCGGGCGCCGGAGGGAAGGGGAAGCGGCGGGTAAGGAGGGCCTGCGTTCGGGCGCGTCTGTGACGGGGTTGGGAACTTCCTCTTCTACTCCCTCCGGCTTTCCGGACCCCTGAGGACTGGAGTGAGAGAAGCCTCTAGAACTGTGTATTTCCTTGTCTTTCCTTCTGCCGCCGCAGGCCTTCCTCCGACAGTCTAAGTGTCGCCCTCCCCAGACCTTCTCGTCCGGACCG
...............................................................((((....)))).......((((..(((((..((((((((((((.(((.(((((....))))).......))).))))).))).))))..)))))..))))......................................................................................
..............................................................63........................................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577453(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040007(GSM532892)
G601T. (cervix)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................................CCGCCGCAGGCCTTCG............................................... 164.000.00-------------------------------1.00-----------------1.00------------------1.00------------------------------------------------------1.00--------------------
................................................................................................................................................................................................................GAGGGCGACACTTAGACTG....................... 1912.002.00---2.00--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GACTGTCGGAGGAAGGC..................................... 1712.002.00-------------------1.00---1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................ACTGTCGGAGGAAGGCC...................................... 1712.002.00---------2.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................AGACTGTCGGAGGAAGGC.................................... 1812.002.00---------------------1.00--------------------------------------------------------------------------1.00-----------------------------------------------
............................................................CCTGCGTTCGGGCGCAGGT........................................................................................................................................................................... 191.000.00--------------------------------------------------------------------------------------------------------------------------1.00---------------------
...........................................................................................................................................................................................CCGCCGCAGGCCTTCGGG............................................. 181.000.00--------------------------------------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................AGTCCTCAGGGGTCCGGAAAGCCGGAG................................................................................................................ 2711.001.00--------------------------------------------------------------------------------------------------------1.00---------------------------------------
...........................................................................................................................................................................................GAAGGCCTGCGGCGG................................................ 1531.001.00------------------------------------------------------------0.33----0.33----------------------------------------------------------------------------0.33-
...............................................................................................................................................................................................CGCAGGCCTTCCTCCTCTG........................................ 191.000.00------------------------------------------------------------------------------------------------------1.00-----------------------------------------
.................................................................................................................................................................................................................................ACGAGAAGGTCTGGGGA........ 1711.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................AAGGAAAGACAAGGA.................................................................. 1501.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CCGCCGCAGGCCTTCGT.............................................. 171.000.00-------------------------------------------------------------------------------------------------------------1.00----------------------------------
.............................................................................................................................................................................................AGACTGTCGGAGGAAGGCCTGCGGC.................................... 2511.001.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAGGTCTGGGGAGGGCGAC............. 1911.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAAGGTCTGGGGAGGGC........... 1811.001.00------------------------------------------------------------------------------------------------------------------------------------1.00-----------
........................................................................................................................................................................................................ACTTAGACTGTCGGAGGA................................ 1811.001.00--------------------------------------------------------------------------1.00---------------------------------------------------------------------
..........................................................................................................................................................................................................ACACTTAGACTGTCGGAG.............................. 1811.001.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GTCGGAGGAAGGCCTGC......................................... 1711.001.00-------------------------------1.00----------------------------------------------------------------------------------------------------------------
...............................................................................................CTTCCTCTTCTACTCCCTCCGGCGT.................................................................................................................................. 251.000.00--------------------------------------------------------------------------------------------------1.00---------------------------------------------
.................................................................................................................................................................................................CAGGCCTTCCTCCGATC........................................ 171.000.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................GACTGTCGGAGGAAGGCCTG..................................... 2011.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GAAGGTCTGGGGAGGGCGAC............ 2011.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------
....................................CCCGCCGCTTCCCCT....................................................................................................................................................................................................... 1530.330.33---------------------------------------------------------------------------------------------------------------------------------------------0.33--
..............................................................................................................................................................................CGGCAGAAGGAAAGAC............................................................ 1630.330.33--------------------------------------------------------------------0.33---------------------------------------------------------------------------