ID: uc001clg.4
GENE: B4GALT2(5)
chr1:44451023-44451238+


(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(5)
B-CELL 		(6)
BRAIN 		(18)
BREAST 		(28)
CELL-LINE 		(12)
CERVIX 		(2)
FIBROBLAST 		(8)
HEART 		(3)
HELA 		(6)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CCCAATGAGTACTGGGGCTGGGGTGGCGAGGATGATGACATCTTCAACCGGTGAGTAAGCACGCGGTGGGGAATAGGCTGGGTGGGGGGGGGAGGGGGGGTGCAGACTGGGTGGGGTTCTTTGCCCTTCCTGGAGCCTGTTCCAGTCTGTCCGTCCCCATCCTCAGGATCTCCCTGACTGGGATGAAGATCTCACGCCCAGACATCCGAATCGGCC
..................................................................................(((((((((((.((.....((((((((((..(((((((...........)))))))..)))))))))))).))))).))))))...................................................
.................................................................................82..................................................................................166................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM532880(GSM532880)
G659T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
.................................................................................................................................................TCTGTCCGTCCCCATCCTCAGT.................................................22151.0014.001.00--1.001.002.001.001.001.00--1.00--1.00--1.003.00-3.002.003.00-----------1.00----2.00-1.002.00--2.00-1.00------1.00--1.00-1.00---1.00---1.00--1.00---1.00-1.00----1.00-1.00---1.00--1.00-----1.00-1.00-------1.00-----1.00--1.00--1.001.00--1.00---
......................................................................................GGGGGGAGGGGGGGTAAA................................................................................................................1816.000.00------1.00--1.00--3.00-1.00-----------2.00-1.00--2.001.00--1.00--2.00-------------------------1.00-------------------------------------------------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTCAG..................................................21114.0014.006.00----1.00-1.001.00--1.00-------------------------------------------------------------------1.00--------1.00--------1.00----1.00-----------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTCAGA.................................................22113.0014.00---2.00---2.00-----------1.00-----1.00------1.00-------2.00------------------------1.00------1.00--------------------------1.00-------------1.00------------
......................................................................................GGGGGGAGGGGGGGTAATC...............................................................................................................199.000.00-9.00----------------------------------------------------------------------------------------------------------------------------
......................................................................................GGGGGGAGGGGGGGTAAAA...............................................................................................................197.000.00------1.00--2.00-------------------------------1.00----1.00------------------------------------------------------1.00--1.00---------------------
..............................................................................................................................................................................TGACTGGGATGAAGATGCC.......................196.000.00-------------------------------------2.00------1.00------------------------1.00-------------------1.00------------------------------1.00-----
................................................................................................................................................GTCTGTCCGTCCCCATCCTCAG..................................................2215.005.005.00-----------------------------------------------------------------------------------------------------------------------------
......................................................................................GGGGGGAGGGGGGGTAA.................................................................................................................175.000.00------1.00-----1.00---------------1.00------1.00-------1.00----------------------------------------------------------------------------------
...............................................................................................................................................AGTCTGTCCGTCCCCATCCTCAGA.................................................2414.002.00----------4.00-------------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGCGC..................................................................................................................194.000.00------------------------1.00-----1.00------------------------------------------1.00-------------------1.00--------------------------------
...................................................................................GGGGGGGGGAGGGGGGCGCG.................................................................................................................203.000.00------------------------2.00-----1.00-----------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTTGTT...............................................................................................................213.000.00-----------------------1.00-----------------------------------------------------------------------1.00--------------------1.00---------
................................................................................................................................................GTCTGTCCGTCCCCATCCTCAGA.................................................2313.005.00----1.00------------1.00------------------------------------------------------------------1.00-----------------------------------------
..............................................................................................................................................................................TGACTGGGATGAAGATGC........................183.000.00-------------------1.00----------------1.00-------1.00---------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTAGGT...............................................................................................................213.000.00---1.001.00---1.00---------------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGTGG.................................................................................................................202.000.00----------------1.00----------------1.00--------------------------------------------------------------------------------------------
...............................................................................................................................................AGTCTGTCCGTCCCCATCCTCAG..................................................2312.002.001.00----------------1.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTCAGC.................................................2212.0014.00----------------------------------------------------1.00---------------1.00---------------------------------------------------------
.................................GATGACATCTTCAACCG......................................................................................................................................................................1712.002.00---------------------1.00----------------------------------------------------------------1.00---------------------------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTCA...................................................2012.002.00-------1.00------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTTGT................................................................................................................202.000.00---1.00-------------------1.00------------------------------------------------------------------------------------------------------
.........TACTGGGGCTGGGGTGGCGAGGACG......................................................................................................................................................................................252.000.00--2.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGTATC.................................................................................................................192.000.00-2.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTGGGTT..............................................................................................................222.000.00-----------------------1.00--------------------------------------------------------------------------------------1.00---------------
......................................................................................GGGGGGAGGGGGGGTAATG...............................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CCCTGACTGGGATGAAGATCTC.......................2211.001.00------1.00-----------------------------------------------------------------------------------------------------------------------
....ATGAGTACTGGGGCTGGGGTGGCGAGGA........................................................................................................................................................................................2811.001.00-----1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTTGAG...............................................................................................................211.000.00---------------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTAGTT...............................................................................................................211.000.00----1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................TGGGGAATAGGCTGGGTGGGTTT...............................................................................................................................231.000.00-------------------------------------------------------------------------------------1.00----------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTTGG................................................................................................................201.000.00--------1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................GGGGGGAGGGGGGGTCTT................................................................................................................181.000.00-------------------------------------------------1.00----------------------------------------------------------------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTCAGTA................................................2311.0014.00-----------------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................GTCTGTCCGTCCCCATCCTCAGT.................................................2311.005.00------------------------------------------------------------------1.00-----------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTTTGT...............................................................................................................211.000.00-----------------------------------------------------------------------------1.00------------------------------------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTAAG..................................................211.000.001.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGTGGT................................................................................................................211.000.00---------------------------------------------------------------------------------------------------------1.00--------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTTAG..................................................211.000.00-----------1.00------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTGGGT...............................................................................................................211.000.00----1.00-------------------------------------------------------------------------------------------------------------------------
........................................................................ATAGGCTGGGTGGGGAAG..............................................................................................................................181.000.00---------------1.00--------------------------------------------------------------------------------------------------------------
.....TGAGTACTGGGGCTGGGGTGG..............................................................................................................................................................................................2111.001.00-------------------1.00----------------------------------------------------------------------------------------------------------
..............................................................GCGGTGGGGAATAGGC..........................................................................................................................................1611.001.00------------------------------------------------------------------------------------------------------------1.00-----------------
...................................................................................................................................................TGTCCGTCCCCATCCTCAGAAG...............................................221.000.00---------------------------------------------------------------------------------------------------------------------------1.00--
....................................................................................GGGGGGGGAGGGGGGGTAA.................................................................................................................191.000.00--------------------------------------------------------------------------------1.00---------------------------------------------
.......AGTACTGGGGCTGGGGTGGCGAGGACG......................................................................................................................................................................................271.000.00--1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................GGGGGGAGGGGGGGTAGAG...............................................................................................................191.000.001.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGTGCG.................................................................................................................191.000.00----------------1.00-------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGTGA...................................................................................................................181.000.00----------------1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................GGAGGGGGGGTGCAGTATT...........................................................................................................191.000.00-------------------------------------------------------------------------------------------------------1.00----------------------
...........................................................................................................................................................................CCCTGACTGGGATGAAGATCTCACGCC..................2711.001.00-----1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTAGG................................................................................................................201.000.00----1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTGTC................................................................................................................201.000.00---------------------------------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................GTTCCAGTCTGTCCGTCCCCAAA.......................................................231.000.00------------------------------------------------------------------------------------------------------------------1.00-----------
..............................................................................................................................................................................TGACTGGGATGAAGATC.........................1711.001.00---------1.00--------------------------------------------------------------------------------------------------------------------
............TGGGGCTGGGGTGGCGAGG.........................................................................................................................................................................................1911.001.00--------------------------------------------------------1.00---------------------------------------------------------------------
................................................................................................................................................GTCTGTCCGTCCCCATCCTCAGC.................................................2311.005.00-------------------------------------------------------------1.00----------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTGGGGA..............................................................................................................221.000.00----------------------------------------------------------------------------------------------1.00-------------------------------
...................................TGACATCTTCAACCGGAT...................................................................................................................................................................181.000.00------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GACTGGGATGAAGATGCA.......................181.000.00--------------------------------------------------------------1.00---------------------------------------------------------------
..........................CGAGGATGATGACATTTTT...........................................................................................................................................................................191.000.00------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGTTAG.................................................................................................................191.000.00---1.00--------------------------------------------------------------------------------------------------------------------------
............................................................................GCTGGGTGGGGGGGGGGTG.........................................................................................................................191.000.00--------1.00---------------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGTATTT...............................................................................................................221.000.00----------------------------------------------------------------------------------------------------1.00-------------------------
...................................................................................GGGGGGGGGAGGGGGGGTTTGT...............................................................................................................221.000.00-----------------------------1.00------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGCATC................................................................................................................211.000.00-1.00----------------------------------------------------------------------------------------------------------------------------
...AATGAGTACTGGGGCTGGGGTGGCGAGGATGATGAC.................................................................................................................................................................................3611.001.00-------------1.00----------------------------------------------------------------------------------------------------------------
................................................................................GGTGGGGGGGGGAGGGGGGGGGG.................................................................................................................231.000.00------------------------------------------------1.00-----------------------------------------------------------------------------
.................................................................................GTGGGGGGGGGAGGGCGCG....................................................................................................................191.000.00-----------------------------------------------------------------------1.00------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTAAAT...............................................................................................................211.000.00-------------------------------------------------------------------------------------------------------------------------1.00----
..........ACTGGGGCTGGGGTGGCGAGGACG......................................................................................................................................................................................241.000.00--1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGTGGTAT..............................................................................................................221.000.00-----------------------------------------------------------------------------------------------------------1.00------------------
.......AGTACTGGGGCTGGGGTGGCGAGGATGAC....................................................................................................................................................................................291.000.00--1.00---------------------------------------------------------------------------------------------------------------------------
...........CTGGGGCTGGGGTGGCGAGGAT.......................................................................................................................................................................................2211.001.00---------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGTGGGGC..............................................................................................................231.000.00---------------------------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GACTGGGATGAAGATCTCACGCC..................2311.001.00--------------------------------------------------1.00---------------------------------------------------------------------------
.....................................................................................GGGGGGGAGGGGGGGACTA................................................................................................................191.000.00---------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................GGGGGGGGAGGGGGGGATGG................................................................................................................201.000.001.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................................TGGGGGGGGGAGGGGGAGC...................................................................................................................191.000.00--1.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGTAGTG...............................................................................................................221.000.00---------------1.00--------------------------------------------------------------------------------------------------------------
....ATGAGTACTGGGGCTGGGGTGGCGA...........................................................................................................................................................................................2511.001.00---------------------------------------------------------------------------------------------------------------1.00--------------
...AATGAGTACTGGGGCTGGGGTGG..............................................................................................................................................................................................2311.001.00-------------1.00----------------------------------------------------------------------------------------------------------------
................................................................................GGTGGGGGGGGGAGGGGGGCGGA.................................................................................................................231.000.00----------------------------------------------1.00-------------------------------------------------------------------------------
................................................................................GGTGGGGGGGGGAGGGGGGGGGC.................................................................................................................231.000.00-------------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGCT..................................................................................................................191.000.00---------------------------------------------------------------------------------------------------------------------1.00--------
..........................................................................................GGAGGGGGGGTGCAGTGTT...........................................................................................................191.000.00----------------------------------------------------------1.00-------------------------------------------------------------------
.................................................................................................................................................TCTGTCCGTCCCCATCCTCAGG.................................................2211.001.00-------------------------------------------1.00----------------------------------------------------------------------------------
................................................................................................................................................GTCTGTCCGTCCCCATCCTC....................................................2011.001.001.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................GTGGGGGGGGGAGGGCTTG....................................................................................................................191.000.00-----------1.00------------------------------------------------------------------------------------------------------------------
........................................................................ATAGGCTGGGTGGGGAAGC.............................................................................................................................191.000.00------------------------------------------------------------1.00-----------------------------------------------------------------
.......................TGGCGAGGATGATGACATCTT............................................................................................................................................................................2111.001.00-------------------------------------------------------------------------------------------------------------1.00----------------
............................................................ACGCGGTGGGGAATAAAA..........................................................................................................................................181.000.00----------------------------------------------------------------------------------------------------------------------------1.00-
.............GGGGCTGGGGTGGCGAGGA........................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------------------------------------1.00
.......................................................................................GGGGGAGGGGGGGTGCA................................................................................................................1720.500.50--------------------------------------------------0.50---------------------------------------------------------------------------
...........................................................................GGCTGGGTGGGGGGGGG............................................................................................................................1740.500.50---0.50--------------------------------------------------------------------------------------------------------------------------
...............................................................................GGGTGGGGGGGGGAGGGGGGG....................................................................................................................2120.500.50---------------------------------------------------0.50--------------------------------------------------------------------------
.....................................................................................GGGGGGGAGGGGGGGTGC.................................................................................................................1820.500.50-------------------------------------------------0.50----------------------------------------------------------------------------
.................................................................................GTGGGGGGGGGAGGGGGGG....................................................................................................................1930.330.33------------------------------------------------0.33-----------------------------------------------------------------------------
.................................................................................GTGGGGGGGGGAGGGGGGGGGG.................................................................................................................2230.330.33------------------------------------------------0.33-----------------------------------------------------------------------------
..................................................................................TGGGGGGGGGAGGGGGGG....................................................................................................................1850.200.20----0.20-------------------------------------------------------------------------------------------------------------------------

Antisense strand
CCCAATGAGTACTGGGGCTGGGGTGGCGAGGATGATGACATCTTCAACCGGTGAGTAAGCACGCGGTGGGGAATAGGCTGGGTGGGGGGGGGAGGGGGGGTGCAGACTGGGTGGGGTTCTTTGCCCTTCCTGGAGCCTGTTCCAGTCTGTCCGTCCCCATCCTCAGGATCTCCCTGACTGGGATGAAGATCTCACGCCCAGACATCCGAATCGGCC
..................................................................................(((((((((((.((.....((((((((((..(((((((...........)))))))..)))))))))))).))))).))))))...................................................
.................................................................................82..................................................................................166................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM532880(GSM532880)
G659T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040019(GSM532904)
G701T. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
.................................................................................GTGGGGGGGGGAGGGGGCC.................................................................................................................... 191.000.00-------------------------------------------------------1.00----------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGGCC................................................................................................................. 201.000.00-------------------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................AGGCTCCAGGAAGGGCAAAGAACCCCA.............................................................................. 2711.001.00----------------------------------------------------------------------------------1.00-------------------------------------------
...................................................................................GGGGGGGGGAGGGGGGGTCCT................................................................................................................ 211.000.00--------------------------------------------------------------------------------------------1.00---------------------------------
...................................................................................................................................................................................................GATTCGGATGTCTGGGC.... 1711.001.00-----------------------------------------------------1.00------------------------------------------------------------------------
...................................................................................GGGGGGGGGAGGGGGTGCT.................................................................................................................. 191.000.00-------------------------------------------------------------------------------------------1.00----------------------------------
................................................................................................................................................GTCTGTCCGTCCCCATCCTCGG.................................................. 221.000.00--1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................CCTGGAGCCTGTTCCAGA...................................................................... 181.000.00-----------------------------1.00------------------------------------------------------------------------------------------------
................................................................................GGTGGGGGGGGGAGGTTTG..................................................................................................................... 191.000.00------------------------------------------------------------------------------1.00-----------------------------------------------
..........................................................................................GGAGGGGGGGTGCAGGCGC........................................................................................................... 191.000.00---------------------------------------------------------------------------1.00--------------------------------------------------
.................................................................................GTGGGGGGGGGAGGGGCC..................................................................................................................... 181.000.00-----1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................CCCCCCCCACCCAGCCTA............................................................................................................................. 1811.001.00----------------------------------1.00-------------------------------------------------------------------------------------------
.................TCCTCGCCACCCCAG........................................................................................................................................................................................ 1570.140.14-------------------------0.14----------------------------------------------------------------------------------------------------