ID: uc001che.2_intron_12_0_chr1_42781127_r.5p
GENE: (2)
chr1:42789155-42789404-


(13)
B-CELL
(4)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(1)
HELA
(1)
LIVER
(1)
OTHER
(2)
SKIN

Sense strand
AGTACCTGTGCATGCAAGACACTGTCCTGGATATTGTGAGAGATCCAAAGGTAATTAAGAGGCATAGTCTCTTAGCAAGAAATGGGTACAGATACTAAGAGCTATGGGTTTACTGAGAAGAGGGAGTGTTTTTTGCTTATGATGATGACAAAAGCTTCGTGGATGAGATAGTGTTTGGATTAAGATTAGACATGGAGCATTCTAGGCTGAGAGCATAGTCAAAGACTTAGAAATGAGGAAGCACAATGCA
........................................................................................(((..(((..........)))...))).......(((((...(((((.((((....))))))))))))))............................................................................................
....................................................................................85..........................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR040011(GSM532896)
G529T. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
.........................................................................................AGATACTAAGAGCTAAC................................................................................................................................................1774.000.0032.0017.009.007.00--4.004.00--1.00----------------
.........................................................................................AGATACTAAGAGCTAACGG..............................................................................................................................................1921.000.005.001.004.00-3.003.001.00---1.00-2.00--1.00-----------
.........................................................................................AGATACTAAGAGCTAACG...............................................................................................................................................1811.000.004.00---2.002.00-------1.001.00-------1.00----
.........................................................................................AGATACTAAGAGCTAACC...............................................................................................................................................186.000.00----3.003.00---------------------
.......................................................................................ACAGATACTAAGAGCTATG................................................................................................................................................1912.002.00---------2.00-----------------
.........................................................................................AGATACTAAGAGCTACGG...............................................................................................................................................182.000.00---2.00-----------------------
.................................................................................................................................................................................................GGAGCATTCTAGGCTGAGAGCATAGTCAA............................2912.002.00--------2.00------------------
........................................................................................................................................TTATGATGATGACAAAAGCTT.............................................................................................2111.001.00------------------------1.00--
...........................................................................................................................................................................................AGACATGGAGCATTCTAGGCTGAGAGCATAGTC..............................3311.001.00--------1.00------------------
............................................................................AAGAAATGGGTACAGATACTAAG.......................................................................................................................................................2311.001.00-----------1.00---------------
.......................................................................................................................GAGGGAGTGTTTTTTGCT.................................................................................................................1811.001.00-----------------1.00---------
.......................................................................................................................GAGGGAGTGTTTTTTGCTGTT..............................................................................................................2111.001.00-------------------1.00-------
...................................................................................................................AGAAGAGGGAGTGTTTTTGC...................................................................................................................201.000.00--------1.00------------------
...............................................................................................................................................................................TGGATTAAGATTAGACATG........................................................1911.001.00-----------1.00---------------
.....................................................................................................................................................................................AAGATTAGACATGGAGCATT.................................................2011.001.00---------------------1.00-----
.........................................................................................................................................................................................................................................TGAGGAAGCACAATGGTAG191.000.00------------------1.00--------
..........................................................................................................................................................................................TAGACATGGAGCATTCTAGGCTGAGAGC....................................2811.001.00-----------------------1.00---
.........................................................................................................................................TATGATGATGACAAAAGCTTCGTGGATGAGATAGTGTTTGGATTAAGATTAGACATGGAGCATTCTAGGCTGAGA......................................7511.001.00----------------1.00----------
...............................................................................................................................................................................TGGATTAAGATTAGAC...........................................................1620.500.50--------------------------0.50

Antisense strand
AGTACCTGTGCATGCAAGACACTGTCCTGGATATTGTGAGAGATCCAAAGGTAATTAAGAGGCATAGTCTCTTAGCAAGAAATGGGTACAGATACTAAGAGCTATGGGTTTACTGAGAAGAGGGAGTGTTTTTTGCTTATGATGATGACAAAAGCTTCGTGGATGAGATAGTGTTTGGATTAAGATTAGACATGGAGCATTCTAGGCTGAGAGCATAGTCAAAGACTTAGAAATGAGGAAGCACAATGCA
........................................................................................(((..(((..........)))...))).......(((((...(((((.((((....))))))))))))))............................................................................................
....................................................................................85..........................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR040011(GSM532896)
G529T. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
.................................................................................................................AAAACACTCCCTCTTCTCA...................................................................................................................... 1911.001.00-------------------------1.00-
......................................................................................................................AGAGGGAGTGTTTTTTG................................................................................................................... 171.000.00--------------------1.00------