| (6) B-CELL | (6) BREAST | (29) CELL-LINE | (4) CERVIX | (3) HEART | (4) HELA | (5) LIVER | (2) OTHER | (1) RRP40.ip | (16) SKIN | (1) TESTES | (2) XRN.ip |
| CTGAGGACTTTCTTGAGAAGCTCGCTTTCCGGACTGGGAAGTTACTAAAGGTGACCCGGCGTTTGTGAGAATTTAGACTGATACTTGTCACAAGCATGTATGTATATGATATGGGCCTTTTTTTGGTATGCATGTATGAGCAGTGTGAAACTTGTCACTTAAGTGATGATGAACCCCTGGGACAACTGAAATACCCCCAAAGTGGTAGGTGGTTTTGGTCCTTTGAATTTAATTGGGAATCTCTTTGTGACCTTTCAGGGTGGAGAGCCCGACTTGCAGACTGTGGGTAAGATGGTCCTCAATGACTG ..................................................................................................................................................................((.((((.((..(((.(((((....(((.((((.((.....))..)))).)))..)))))............)))..))...)))).))......................................................... ............................................................................................................................................................157..................................................................................................258................................................ | Size | Perfect hit | Total Norm | Perfect Norm | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR015363(GSM380328) Germinal Center B cell (GC40). (B cell) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR553576(SRX182782) source: Testis. (testes) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR029124(GSM416753) HeLa. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR189782 | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR029130(GSM416759) DLD2. (cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR330857(SRX091695) tissue: skin psoriatic involveddisease state:. (skin) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189783 | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | GSM532880(GSM532880) G659T. (cervix) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM416733(GSM416733) HEK293. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | TAX577739(Rovira) total RNA. (breast) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR038859(GSM458542) MM386. (cell line) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | TAX577744(Rovira) total RNA. (breast) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR040043(GSM532928) G428T. (cervix) | TAX577453(Rovira) total RNA. (breast) | TAX577745(Rovira) total RNA. (breast) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | TAX577743(Rovira) total RNA. (breast) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR040029(GSM532914) G026T. (cervix) | SRR191407(GSM715517) 81genomic small RNA (size selected RNA from t. (breast) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR040039(GSM532924) G531T. (cervix) | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................AGTGATGATGAACCCCTGGGACAACTGAAA..................................................................................................................... | 30 | 1 | 154.00 | 154.00 | 19.00 | - | 19.00 | 15.00 | 13.00 | - | 11.00 | 9.00 | 9.00 | 6.00 | 5.00 | 5.00 | 3.00 | - | - | 1.00 | 1.00 | 2.00 | 2.00 | 2.00 | - | 3.00 | 3.00 | 2.00 | 1.00 | 1.00 | - | - | - | 2.00 | - | 2.00 | - | 2.00 | 2.00 | 1.00 | - | 1.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGTGATGATGAACCCCTGGGACAACTG........................................................................................................................ | 27 | 1 | 33.00 | 33.00 | - | 20.00 | - | - | - | 13.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................GTGATGATGAACCCCTGGGACAACTGAAA..................................................................................................................... | 29 | 1 | 4.00 | 4.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................AAGTGATGATGAACCCCTGGGACAACTGAAA..................................................................................................................... | 31 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGTGATGATGAACCCCTGGGACA............................................................................................................................ | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGTGATGATGAACCCCTGGGACAACTGAAAA.................................................................................................................... | 31 | 1 | 2.00 | 154.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TTAAGTGATGATGAACCCCTGGGACAACTGAAA..................................................................................................................... | 33 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................ATCTCTTTGTGACCTCCA.................................................... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................................................................TGCAGACTGTGGGTAAGATGG............. | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................GTGATGATGAACCCCCGG................................................................................................................................ | 18 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................AGTGATGATGAACCCCTGGGACAACTGAA...................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................AGAGCCCGACTTGCAGACTGTGGG..................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................AGACTGTGGGTAAGATGGTCCTC........ | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGTGATGATGAACCCAGGT................................................................................................................................ | 19 | 4 | 1.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | 0.25 | 0.25 | 0.25 | - | - | - |
| ..................................................................................................................................................................................................................................................................................TGCAGACTGTGGGTAAGATGGTCCT......... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................ACTTGCAGACTGTGGGTAAGATG.............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................TGGGTAAGATGGTCCTGC....... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................TTTCCGGACTGGGAAGCT......................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................GCAGACTGTGGGTAAGATGGTCCTCA....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................GCTCGCTTTCCGGACTGGG.............................................................................................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGTGATGATGAACCCCTGGGACAACTGAAC..................................................................................................................... | 30 | 1 | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................GCCCGACTTGCAGACTGGGGG..................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................AGAGCCCGACTTGCAGACTG......................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................AGACTGTGGGTAAGATG.............. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGAGGACTTTCTTGAGAAGC............................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................GTGGAGAGCCCGACTTGCAGA............................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................GGTGACCCGGCGTTTGTGAGAATTTAGACTGATACTTGTCACAAGCATGTATGTATATGATATGGGCCTTTTTTTGGTATGCATGTA............................................................................................................................................................................ | 87 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................AGCTCGCTTTCCGGACTGG............................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................CAGACTGTGGGTAAGATGGTCC.......... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGACCCGGCGTTTGAA................................................................................................................................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................ACTTGCAGACTGTGGGT.................... | 17 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................TTGCAGACTGTGGGTAAGATG.............. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................AGACTGTGGGTAAGATGGTCC.......... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................CGACTTGCAGACTGTG....................... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..GAGGACTTTCTTGAGAAGCTCGCTTTCCGG.................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................TGCAGACTGTGGGTAAGATTTT............ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............TGAGAAGCTCGCTTTCCGGACTGGGAAGCT......................................................................................................................................................................................................................................................................... | 30 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................................TGGGTAAGATGGTCCAATG...... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................................................................AGACTGTGGGTAAGATGGT............ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................AGACTGTGGGTAAGATGG............. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGTGATGATGAACCCCTGGGT.............................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............TGAGAAGCTCGCTTTCCGGACTGGGA............................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CTTGAGAAGCTCGCTTTCCGGACTGGGA............................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TTGAGAAGCTCGCTTTCCGGACTGGGA............................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................CCCGACTTGCAGACTGTGGGTAAGATGGTC........... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................GTATATGATATGGGCCTTTTT.......................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................GGGAATCTCTTTGTGACC........................................................ | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| .TGAGGACTTTCTTGAGAAG................................................................................................................................................................................................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| .................................CTGGGAAGTTACTAAAG.................................................................................................................................................................................................................................................................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................GACTTGCAGACTGTGG...................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................CAACTGAAATACCCCC.............................................................................................................. | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - |
| .................................................................................................................................................................AGTGATGATGAACCCAGGA................................................................................................................................ | 19 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - |
| .................................................................................................................................................................AGTGATGATGAACCC.................................................................................................................................... | 15 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - |
| .................................................................................................................................................................AGTGATGATGAACCCAGG................................................................................................................................. | 18 | 4 | 0.25 | 0.25 | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................GACTTGCAGACTGTG....................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| ...............................................................................................................................................................................CCTGGGACAACTGAAA..................................................................................................................... | 16 | 7 | 0.14 | 0.14 | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTGAGGACTTTCTTGAGAAGCTCGCTTTCCGGACTGGGAAGTTACTAAAGGTGACCCGGCGTTTGTGAGAATTTAGACTGATACTTGTCACAAGCATGTATGTATATGATATGGGCCTTTTTTTGGTATGCATGTATGAGCAGTGTGAAACTTGTCACTTAAGTGATGATGAACCCCTGGGACAACTGAAATACCCCCAAAGTGGTAGGTGGTTTTGGTCCTTTGAATTTAATTGGGAATCTCTTTGTGACCTTTCAGGGTGGAGAGCCCGACTTGCAGACTGTGGGTAAGATGGTCCTCAATGACTG ..................................................................................................................................................................((.((((.((..(((.(((((....(((.((((.((.....))..)))).)))..)))))............)))..))...)))).))......................................................... ............................................................................................................................................................157..................................................................................................258................................................ | Size | Perfect hit | Total Norm | Perfect Norm | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR207118(GSM721080) RRP40 knockdown. (RRP40 cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR015363(GSM380328) Germinal Center B cell (GC40). (B cell) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR553576(SRX182782) source: Testis. (testes) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR029124(GSM416753) HeLa. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330872(SRX091710) tissue: skin psoriatic involveddisease state:. (skin) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR189782 | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR029130(GSM416759) DLD2. (cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR330857(SRX091695) tissue: skin psoriatic involveddisease state:. (skin) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189783 | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | GSM532880(GSM532880) G659T. (cervix) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM416733(GSM416733) HEK293. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | TAX577739(Rovira) total RNA. (breast) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR038859(GSM458542) MM386. (cell line) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | TAX577744(Rovira) total RNA. (breast) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR040043(GSM532928) G428T. (cervix) | TAX577453(Rovira) total RNA. (breast) | TAX577745(Rovira) total RNA. (breast) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | TAX577743(Rovira) total RNA. (breast) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR040029(GSM532914) G026T. (cervix) | SRR191407(GSM715517) 81genomic small RNA (size selected RNA from t. (breast) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR040039(GSM532924) G531T. (cervix) | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) |
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| .................................................................................................................................................................................................................................................TCTTTGTGACCTTTCACGG................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................ACCCCTGGGACAACTGCCCG.................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................GGGACAACTGAAATAGTCC............................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................TTAATTGGGAATCTCGCGG............................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................ACTTAAGTGATGATGAACG..................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CTGGGACAACTGAAATATCTG............................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................ACCCTGAAAGGTCACAAA............................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |