ID: uc001cbi.2_intron_0_0_chr1_38003614_r.3p
GENE: (3)
chr1:38003564-38003813-


(1)
AGO2.ip 		(5)
BRAIN 		(4)
BREAST 		(5)
CELL-LINE 		(4)
CERVIX 		(1)
HEART 		(1)
HELA 		(4)
OTHER 		(2)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
CTAAGTATATTTAAACTTCCAATTTTCCTTCCCAGGGCCATGCTTTCCCCTTGATTTCTTTGATTCCCTAGAATTTTAACTTGAATTGTGCTCAAGCCAGGTTATTTACGTCATCTAGGCTATCTTAGCAAAGAGCTTTAGAGAAGCTGGATGATCTGAGGCAGAAGTTTGCTCACAGGTTTCTCCTTTTTTTCTGCTAGGCTTGTGGAATATACCCGTGCTGATGGCACAGTTGGCCGAAGAGTGAAGC
.............................................................(((((....))))).(((((((..(((....)))..))))))).....((((((((.(((.(((.(((.....)))..)))..)))))))))))(((.(((((....)))))..)))........................................................................
..................................................51...............................................................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR040032(GSM532917)
G603N. (cervix)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................................................TGAGGCAGAAGTTTGCACAG..........................................................................2022.000.0017.005.00--------------------------
............................................................................................................................................................TGAGGCAGAAGTTTGTGCT...........................................................................194.000.00-1.002.00----------------------1.00--
............................................................................................................................................................TGAGGCAGAAGTTTGTACA...........................................................................194.000.00-2.00----------1.00--------1.00------
............................................................................................................................................................TGAGGCAGAAGTTTGCATAG..........................................................................203.000.001.001.00------------1.00-------------
............................................................................................................................................................TGAGGCAGAAGTTTGCACGG..........................................................................201.000.00-1.00--------------------------
..................................................................................................................................................................................................................................GCACAGTTGGCCGAAGAG......1811.001.00----1.00-----------------------
.........................................................................................................................................................................................................................GTGCTGATGGCACAGCCCG..............191.000.00----------1.00-----------------
..................................................TTGATTTCTTTGATTTATT.....................................................................................................................................................................................191.000.00------1.00---------------------
................................................................................................................................................................................AGGTTTCTCCTTTTTTTGTTC.....................................................211.000.00--------1.00-------------------
............................................................................................................................................................TGAGGCAGAAGTTTGTGCC...........................................................................191.000.00--1.00-------------------------
............................................................................................................................................................TGAGGCAGAAGTTTGTCA............................................................................181.000.00-----1.00----------------------
............................................................................................................................................................TGAGGCAGAAGTTTGTC.............................................................................171.000.00-------1.00--------------------
............................................................................................................................................................TGAGGCAGAAGTTTGCTCAGTT........................................................................221.000.00---1.00------------------------
............................................................................................................................................................TGAGGCAGAAGTTTGTT.............................................................................171.000.00----1.00-----------------------
.....................................................................................................................................................GATGATCTGAGGCAG......................................................................................1501.001.00---------------1.00------------
............................................................................................................................................................TGAGGCAGAAGTTTGCAGAG..........................................................................201.000.001.00---------------------------
............................................................................................................................................................TGAGGCAGAAGTTTGTGTG...........................................................................191.000.00-----------------1.00----------
............................................................................................................................................................TGAGGCAGAAGTTTGCCCAG..........................................................................201.000.001.00---------------------------
............................................................................................................................................................TGAGGCAGAAGTTTGGACT...........................................................................191.000.00-------------1.00--------------
............................................................................................................................................................TGAGGCAGAAGTTTGTA.............................................................................171.000.00-----1.00----------------------
............................................................................................................................................................TGAGGCAGAAGTTTGACAG...........................................................................191.000.00-1.00--------------------------
.............................................................................................................................................................GAGGCAGAAGTTTGCACAG..........................................................................191.000.00-1.00--------------------------
............................................................................................................................................................TGAGGCAGAAGTTTGTTCT...........................................................................191.000.00--------------------1.00-------
............................................................................................................................................................TGAGGCAGAAGTTTGCACG...........................................................................191.000.001.00---------------------------
.....................................................................................................TTATTTACGTCATCTAGG...................................................................................................................................1811.001.00-----------1.00----------------
............................................................................................................................................................................TCACAGGTTTCTCCTCC.............................................................171.000.00----------------1.00-----------
............................................................................................................................................................TGAGGCAGAAGTTTGCGCTG..........................................................................201.000.001.00---------------------------
...................................................................................................................................................TGGATGATCTGAGGCAGAAGTTTGCTCACAGG.......................................................................3211.001.00-------------------1.00--------
............................................................................................................................................................TGAGGCAGAAGTTTGTATA...........................................................................191.000.00---1.00------------------------
.................................................................................................................................................................................GGTTTCTCCTTTTTTGCCG......................................................191.000.00------1.00---------------------
............................................................................................................................................................TGAGGCAGAAGTTTGCCCGG..........................................................................201.000.00-1.00--------------------------
............................................................................................................................................GAGAAGCTGGATGATCTGA...........................................................................................1911.001.00----------------------1.00-----
..............................................................................................................................................GAAGCTGGATGATCTTAC..........................................................................................181.000.00---------1.00------------------
............................................................................................................................................................TGAGGCAGAAGTTTGGGA............................................................................181.000.00------------------------1.00---
............................................................................................................................................................TGAGGCAGAAGTTTGTTCG...........................................................................191.000.00---1.00------------------------
...............................................................................................................................................................................................................................ATGGCACAGTTGGCCGAAGAG......2111.001.00------------------1.00---------
...................................................................................................................................................................................TTTCTCCTTTTTTTCGT......................................................171.000.00--------------------------1.00-
............................................................................................................................................................TGAGGCAGAAGTTTGTGC............................................................................181.000.00-------1.00--------------------
.......................................................................................................................................................TGATCTGAGGCAGAAGTTT................................................................................1920.500.50---------------------------0.50

Antisense strand
CTAAGTATATTTAAACTTCCAATTTTCCTTCCCAGGGCCATGCTTTCCCCTTGATTTCTTTGATTCCCTAGAATTTTAACTTGAATTGTGCTCAAGCCAGGTTATTTACGTCATCTAGGCTATCTTAGCAAAGAGCTTTAGAGAAGCTGGATGATCTGAGGCAGAAGTTTGCTCACAGGTTTCTCCTTTTTTTCTGCTAGGCTTGTGGAATATACCCGTGCTGATGGCACAGTTGGCCGAAGAGTGAAGC
.............................................................(((((....))))).(((((((..(((....)))..))))))).....((((((((.(((.(((.(((.....)))..)))..)))))))))))(((.(((((....)))))..)))........................................................................
..................................................51...............................................................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR040032(GSM532917)
G603N. (cervix)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................TTCCAATTTTCCTTCCCAACA..................................................................................................................................................................................................................... 211.000.00-1.00--------------------------
..............ACTTCCAATTTTCCTTCCA......................................................................................................................................................................................................................... 191.000.00-----------------------1.00----
........................................................................................AACCTGGCTTGAGCA................................................................................................................................................... 1580.120.12--------0.12-------------------